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<prev • 71 results • page 1 of 3 • next >
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BLAT Results to BED for each Gene
blat written 16 days ago by gtasource • 20
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0
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1.3k
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0
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How to prepare index/server for blat?
alignment blat gfserver index written 2.6 years ago by kirannbishwa01 • 860 • updated 4 weeks ago by RamRS ♦ 18k
2
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1
answer
228
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1
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Odd max query limit in BLAT
blat written 4 months ago by juan.crescente • 20
3
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4
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273
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6 follow
4
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Forum: How do you use BLAST?
forum blast sequence searching blat written 5 months ago by Emily_Ensembl ♦ 16k • updated 5 months ago by Vijay Lakhujani ♦ 3.1k
1
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1
answer
261
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1
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Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 5 months ago by deepti1rao • 20 • updated 5 months ago by h.mon ♦ 20k
7
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4
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2.6k
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5 follow
4
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Problems For Mapping Contigs Onto Reference
genome reference blat written 7.5 years ago by Plantae • 380 • updated 5 months ago by deepti1rao • 20
1
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0
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331
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UCSC Blat Result Problem
local blat ucsc blat blat written 6 months ago by selam • 0
2
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1
answer
363
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1
answer
BLAT command call in c++ project (Netbeans)
c++ blat written 11 months ago by madiha_shabbir46 • 0 • updated 11 months ago by kloetzl • 990
3
votes
1
answer
671
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1
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Database for local BLAST and BLAT for 200-1000bp query sequences in human and primates
blast blat written 15 months ago by rmartson • 10 • updated 15 months ago by WouterDeCoster ♦ 32k
0
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1
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490
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1
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Is it possible to download BLAT results as actual sequences i.e. in genbank or fasta format?
blat ucsc written 15 months ago by rmartson • 10
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1
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402
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1
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Where do you actually download UCSC BLAT output?
blat blast ucsc written 15 months ago by rmartson • 10
0
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0
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390
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0
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Bam file without any sequence
psl2sam sam blat written 18 months ago by tiago211287 • 1.0k
2
votes
1
answer
424
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1
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BLAT for Web Apollo
apollo alignment sequence blast blat written 19 months ago by mas14 • 10
7
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3
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3.3k
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3
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How To Find The Best Hit From Output.Psl
bioinformatics alignment blat written 4.9 years ago by alok.helix • 70 • updated 20 months ago by osowiecki • 0
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527
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Tool BreaKMer Error - gfServer wait time exceeded
breakmer gfserver blat written 20 months ago by shrutidesai0208 • 0
1
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0
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721
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0
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BLAT against nt
2bit fasta nt contamination blat written 21 months ago by Assa Yeroslaviz • 1.1k
25
votes
3
answers
8.3k
views
8 follow
3
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Conversion Of Blat Output To Sam/Bam
conversion format sam bam blat written 7.7 years ago by Michael Dondrup ♦ 44k • updated 21 months ago by Botond Sipos • 1.6k
2
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0
answers
812
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0
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Tool: Uncle PSL: BLAT to SAM conversion in Python
alignment blat tool rna-seq sam written 21 months ago by Botond Sipos • 1.6k
9
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3
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1.9k
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3
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where to download blat command tool for windows?
windows blat written 2.5 years ago by Chen • 730 • updated 21 months ago by liangjiao.xue • 100
6
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3
answers
6.7k
views
3
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Trouble Installing Blat Executables
blat written 5.5 years ago by agatorano • 40 • updated 23 months ago by brianlee • 0
2
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1
answer
982
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1
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Convert BLAT to GFF file?
psl annotation gff alignment blat written 2.0 years ago by rm16 • 0
3
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1
answer
653
views
1
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Popen Blat has different behavior than same syntax in shell
python blat written 2.1 years ago by nchuang • 180
2
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1
answer
1.3k
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1
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Query Ucsc With Known Sequence To Get Chr Position
ucsc mysql blat written 4.9 years ago by mathew.nightingale • 10 • updated 2.1 years ago by Biostar ♦♦ 20
0
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0
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520
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0
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Blat: Assertion 'offset <= inSeq->size' failed
alignment blat written 2.1 years ago by Ric • 190
1
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0
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881
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0
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BLAT with cython? Bypassing the IO of BLAT
python cython blat written 2.2 years ago by adkhawkins • 0
4
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1
answer
3.5k
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1
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UCSC blat command-line version
commandlineblat blat ucsc written 2.3 years ago by alessandro_d • 0 • updated 2.3 years ago by Emily_Ensembl ♦ 16k
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1
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1.1k
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1
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BLAT: how to select best hit at one genomic position? (queries are repeats)
genome transposable elements .psl best hit blat written 2.5 years ago by goubert.clement • 10 • updated 2.5 years ago by Amitm • 1.6k
1
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1
answer
776
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1
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Tuning local blat to perform more like UCSC's version
blat written 2.5 years ago by dchen71 • 0 • updated 2.5 years ago by mastal511 • 2.0k
0
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1
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1.7k
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1
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PASA: Error during sample run
gmap pasa myposts blat written 2.7 years ago by Chirag Parsania • 980
4
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2
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1.7k
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2
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How can I know what genes each Trinity ID are ?
rnaseq trinity blat denovo assembly written 2.8 years ago by tiago211287 • 1.0k • updated 2.8 years ago by cyril-cros • 820
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