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Is it possible to do a variant call on a BLAT output?
variant-call snp blat written 6 weeks ago by BlatUser0070 • updated 6 weeks ago by JC11k
7
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4
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3.1k
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5 follow
4
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Problems For Mapping Contigs Onto Reference
genome reference blat written 9.5 years ago by Plantae380 • updated 8 weeks ago by Biostar ♦♦ 20
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1
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209
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2
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2.0k
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6
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422
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1
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0
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222
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BLAT error while execution
error blat written 6 months ago by amitpande740 • updated 6 months ago by ATpoint40k
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156
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2
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2
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1.8k
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2
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Convert BLAT to GFF file?
psl annotation gff alignment blat written 4.0 years ago by rm160 • updated 8 months ago by pengchy430
2
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1
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323
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2
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216
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0
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405
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0
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1
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208
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1
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Efficiently run blat for long sequences
assembly sequence alignment blat written 13 months ago by Jautis290 • updated 13 months ago by Vitis2.4k
2
votes
1
answer
331
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1
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gene prediction without GT-AG splice site bias
genome annotation assembly rna-seq blat written 15 months ago by praasu30 • updated 15 months ago by caggtaagtat1.3k
0
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1
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283
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1
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How to check the expression of a gene using the sequence of that gene?
ensembl sequence lncrna rna-seq blat written 15 months ago by Biologist190 • updated 15 months ago by flogin250
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450
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3
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1
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1.3k
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5 follow
1
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1
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1
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636
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1
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BWASW and _alt alleles
alignment bwa blat written 23 months ago by Maximilian Haeussler1.3k
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428
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0
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0
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460
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BLAT Results to BED for each Gene
blat written 2.1 years ago by gtasource60
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2.0k
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0
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How to prepare index/server for blat?
alignment blat gfserver index written 4.7 years ago by kirannbishwa011.2k • updated 2.1 years ago by RamRS30k
2
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1
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710
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1
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Odd max query limit in BLAT
blat written 2.4 years ago by juan.crescente40
3
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4
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635
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6 follow
4
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Forum: How do you use BLAST?
forum blast sequence searching blat written 2.4 years ago by Emily_Ensembl21k • updated 2.4 years ago by lakhujanivijay5.3k
2
votes
1
answer
859
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1
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Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 2.5 years ago by deepti1rao30 • updated 2.5 years ago by h.mon31k
1
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0
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939
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UCSC Blat Result Problem
local blat ucsc blat blat written 2.6 years ago by selam0
2
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1
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769
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1
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BLAT command call in c++ project (Netbeans)
c++ blat written 3.0 years ago by madiha_shabbir460 • updated 3.0 years ago by kloetzl1.1k
4
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1
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1.4k
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1
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0
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1
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1.0k
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1
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0
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1
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842
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1
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0
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0
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801
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0
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Bam file without any sequence
psl2sam sam blat written 3.5 years ago by tiago2112871.2k
2
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1
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810
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1
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BLAT for Web Apollo
apollo alignment sequence blast blat written 3.6 years ago by mas1410
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