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<prev • 74 results • page 1 of 3 • next >
2
votes
1
answer
198
views
1
answer
How to compare two proteomes
proteome alignement blast comparison blat written 11 weeks ago by tal • 0
1
vote
1
answer
177
views
1
answer
BWASW and _alt alleles
alignment bwa blat written 3 months ago by Maximilian Haeussler • 1.3k
0
votes
0
answers
165
views
0
answers
Coordinates for Gene in Unannotated Reference FASTA
annotation blast blat written 3 months ago by gtasource • 20
0
votes
0
answers
146
views
0
answers
BLAT Results to BED for each Gene
blat written 4 months ago by gtasource • 20
0
votes
0
answers
1.4k
views
0
answers
How to prepare index/server for blat?
alignment blat gfserver index written 3.0 years ago by kirannbishwa01 • 930 • updated 5 months ago by RamRS ♦ 20k
2
votes
1
answer
349
views
1
answer
Odd max query limit in BLAT
blat written 8 months ago by juan.crescente • 20
3
votes
4
answers
365
views
6 follow
4
answers
Forum: How do you use BLAST?
forum blast sequence searching blat written 9 months ago by Emily_Ensembl ♦ 17k • updated 9 months ago by vijay lakhujani ♦ 3.6k
2
votes
1
answer
361
views
1
answer
Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 9 months ago by deepti1rao • 20 • updated 9 months ago by h.mon ♦ 23k
7
votes
4
answers
2.7k
views
5 follow
4
answers
Problems For Mapping Contigs Onto Reference
genome reference blat written 7.8 years ago by Plantae • 380 • updated 9 months ago by deepti1rao • 20
1
vote
0
answers
430
views
0
answers
UCSC Blat Result Problem
local blat ucsc blat blat written 10 months ago by selam • 0
2
votes
1
answer
454
views
1
answer
BLAT command call in c++ project (Netbeans)
c++ blat written 15 months ago by madiha_shabbir46 • 0 • updated 15 months ago by kloetzl • 1.0k
3
votes
1
answer
837
views
1
answer
Database for local BLAST and BLAT for 200-1000bp query sequences in human and primates
blast blat written 19 months ago by rmartson • 10 • updated 19 months ago by WouterDeCoster ♦ 36k
0
votes
1
answer
600
views
1
answer
Is it possible to download BLAT results as actual sequences i.e. in genbank or fasta format?
blat ucsc written 19 months ago by rmartson • 10
0
votes
1
answer
515
views
1
answer
Where do you actually download UCSC BLAT output?
blat blast ucsc written 19 months ago by rmartson • 10
0
votes
0
answers
463
views
0
answers
Bam file without any sequence
psl2sam sam blat written 22 months ago by tiago211287 • 1.1k
2
votes
1
answer
515
views
1
answer
BLAT for Web Apollo
apollo alignment sequence blast blat written 23 months ago by mas14 • 10
7
votes
3
answers
3.6k
views
3
answers
How To Find The Best Hit From Output.Psl
bioinformatics alignment blat written 5.2 years ago by alok.helix • 70 • updated 24 months ago by osowiecki • 0
0
votes
0
answers
591
views
0
answers
Tool BreaKMer Error - gfServer wait time exceeded
breakmer gfserver blat written 2.0 years ago by shrutidesai0208 • 0
1
vote
0
answers
845
views
0
answers
BLAT against nt
2bit fasta nt contamination blat written 2.1 years ago by Assa Yeroslaviz • 1.1k
25
votes
3
answers
8.6k
views
8 follow
3
answers
Conversion Of Blat Output To Sam/Bam
conversion format sam bam blat written 8.1 years ago by Michael Dondrup ♦ 45k • updated 2.1 years ago by Botond Sipos • 1.7k
2
votes
0
answers
896
views
0
answers
Tool: Uncle PSL: BLAT to SAM conversion in Python
alignment blat tool rna-seq sam written 2.1 years ago by Botond Sipos • 1.7k
9
votes
3
answers
2.1k
views
3
answers
where to download blat command tool for windows?
windows blat written 2.8 years ago by Chen • 770 • updated 2.1 years ago by liangjiao.xue • 100
6
votes
3
answers
7.0k
views
3
answers
Trouble Installing Blat Executables
blat written 5.9 years ago by agatorano • 40 • updated 2.3 years ago by brianlee • 0
2
votes
1
answer
1.1k
views
1
answer
Convert BLAT to GFF file?
psl annotation gff alignment blat written 2.4 years ago by rm16 • 0
3
votes
1
answer
773
views
1
answer
Popen Blat has different behavior than same syntax in shell
python blat written 2.4 years ago by nchuang • 190
2
votes
1
answer
1.4k
views
1
answer
Query Ucsc With Known Sequence To Get Chr Position
ucsc mysql blat written 5.2 years ago by mathew.nightingale • 10 • updated 2.4 years ago by Biostar ♦♦ 20
0
votes
0
answers
574
views
0
answers
Blat: Assertion 'offset <= inSeq->size' failed
alignment blat written 2.5 years ago by Ric • 190
1
vote
0
answers
988
views
0
answers
BLAT with cython? Bypassing the IO of BLAT
python cython blat written 2.6 years ago by adkhawkins • 0
4
votes
1
answer
4.1k
views
1
answer
UCSC blat command-line version
commandlineblat blat ucsc written 2.6 years ago by alessandro_d • 0 • updated 2.6 years ago by Emily_Ensembl ♦ 17k
0
votes
1
answer
1.3k
views
1
answer
BLAT: how to select best hit at one genomic position? (queries are repeats)
genome transposable elements .psl best hit blat written 2.8 years ago by goubert.clement • 10 • updated 2.8 years ago by Amitm • 1.6k
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