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<prev • 75 results • page 1 of 3 • next >
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Aligning SNP array probes to human genome with BLAT -- how to prioritize matches?
array probe alignment snp blat written 11 weeks ago by croberts377 • 0
2
votes
1
answer
384
views
1
answer
How to compare two proteomes
proteome alignement blast comparison blat written 6 months ago by tal • 0
1
vote
1
answer
289
views
1
answer
BWASW and _alt alleles
alignment bwa blat written 7 months ago by Maximilian Haeussler • 1.3k
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0
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229
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0
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Coordinates for Gene in Unannotated Reference FASTA
annotation blast blat written 8 months ago by gtasource • 20
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0
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218
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BLAT Results to BED for each Gene
blat written 8 months ago by gtasource • 20
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0
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1.5k
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How to prepare index/server for blat?
alignment blat gfserver index written 3.3 years ago by kirannbishwa01 • 1000 • updated 9 months ago by RamRS ♦ 22k
2
votes
1
answer
454
views
1
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Odd max query limit in BLAT
blat written 13 months ago by juan.crescente • 20
3
votes
4
answers
429
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6 follow
4
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Forum: How do you use BLAST?
forum blast sequence searching blat written 13 months ago by Emily_Ensembl ♦ 18k • updated 13 months ago by Vijay Lakhujani ♦ 4.2k
2
votes
1
answer
493
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1
answer
Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 13 months ago by deepti1rao • 20 • updated 13 months ago by h.mon ♦ 26k
7
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4
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2.8k
views
5 follow
4
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Problems For Mapping Contigs Onto Reference
genome reference blat written 8.2 years ago by Plantae • 380 • updated 13 months ago by deepti1rao • 20
1
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0
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532
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UCSC Blat Result Problem
local blat ucsc blat blat written 14 months ago by selam • 0
2
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1
answer
525
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1
answer
BLAT command call in c++ project (Netbeans)
c++ blat written 19 months ago by madiha_shabbir46 • 0 • updated 19 months ago by kloetzl • 1.0k
4
votes
1
answer
986
views
1
answer
Database for local BLAST and BLAT for 200-1000bp query sequences in human and primates
blast blat written 23 months ago by rmartson • 20 • updated 23 months ago by WouterDeCoster ♦ 39k
0
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1
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716
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1
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Is it possible to download BLAT results as actual sequences i.e. in genbank or fasta format?
blat ucsc written 23 months ago by rmartson • 20
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596
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1
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Where do you actually download UCSC BLAT output?
blat blast ucsc written 23 months ago by rmartson • 20
0
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525
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0
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Bam file without any sequence
psl2sam sam blat written 2.2 years ago by tiago211287 • 1.1k
2
votes
1
answer
579
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1
answer
BLAT for Web Apollo
apollo alignment sequence blast blat written 2.3 years ago by mas14 • 10
9
votes
3
answers
3.9k
views
3
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How To Find The Best Hit From Output.Psl
bioinformatics alignment blat written 5.6 years ago by alok.helix • 80 • updated 2.3 years ago by osowiecki • 0
0
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0
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664
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Tool BreaKMer Error - gfServer wait time exceeded
breakmer gfserver blat written 2.4 years ago by shrutidesai0208 • 0
1
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0
answers
985
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0
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BLAT against nt
2bit fasta nt contamination blat written 2.4 years ago by Assa Yeroslaviz • 1.2k
25
votes
3
answers
8.9k
views
8 follow
3
answers
Conversion Of Blat Output To Sam/Bam
conversion format sam bam blat written 8.4 years ago by Michael Dondrup ♦ 46k • updated 2.4 years ago by Botond Sipos • 1.7k
2
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0
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993
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0
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Tool: Uncle PSL: BLAT to SAM conversion in Python
alignment blat tool rna-seq sam written 2.4 years ago by Botond Sipos • 1.7k
10
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3
answers
2.3k
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3
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where to download blat command tool for windows?
windows blat written 3.1 years ago by Chen • 880 • updated 2.4 years ago by liangjiao.xue • 100
6
votes
3
answers
7.2k
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3
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Trouble Installing Blat Executables
blat written 6.2 years ago by agatorano • 40 • updated 2.6 years ago by brianlee • 0
2
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1
answer
1.2k
views
1
answer
Convert BLAT to GFF file?
psl annotation gff alignment blat written 2.7 years ago by rm16 • 0
3
votes
1
answer
875
views
1
answer
Popen Blat has different behavior than same syntax in shell
python blat written 2.7 years ago by nchuang • 200
2
votes
1
answer
1.4k
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1
answer
Query Ucsc With Known Sequence To Get Chr Position
ucsc mysql blat written 5.6 years ago by mathew.nightingale • 10 • updated 2.8 years ago by Biostar ♦♦ 20
0
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0
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615
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0
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Blat: Assertion 'offset <= inSeq->size' failed
alignment blat written 2.8 years ago by Ric • 240
1
vote
0
answers
1.1k
views
0
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BLAT with cython? Bypassing the IO of BLAT
python cython blat written 2.9 years ago by adkhawkins • 0
4
votes
1
answer
4.8k
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1
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UCSC blat command-line version
commandlineblat blat ucsc written 2.9 years ago by alessandro_d • 0 • updated 2.9 years ago by Emily_Ensembl ♦ 18k
<prev • 75 results • page 1 of 3 • next >
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