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Number of Comparisons in Bonferroni Correction

bonferroni snp multiple testing written 11 days ago by khatami.mahshid • 10 • updated 11 days ago by ATpoint ♦ 21k

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Executing Permutation Test with Hypergeometric P Value

permutation test bonferroni forum hypergeometric written 3.1 years ago by melodyo • 0 • updated 3.1 years ago by WouterDeCoster ♦ 40k

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Genetic power calculation: how many individuals will survive p-val correction

power calculation gwas bonferroni maf odd ratio written 3.1 years ago by epermina • 0 • updated 3.1 years ago by natasha.sernova • 3.5k

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Problem with the plink output file for adjusted Bonferroni test

bonferroni inf plink snp significant snp written 5.2 years ago by debitboro • 110 • updated 5.2 years ago by chrchang523 ♦ 5.5k

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Recent Replies

C: Different results between two methods for the extraction of SNPs, common for a s by pavlo.maksimov • 0
Thank you very much for the tip. I'll try it now.
C: Unable to perform tbl2asn for submission of transcriptome to Genbank by al-ash • 110
I'm receiving error "[linux64.tbl2asn] File contains unexpected extra data" as well. This error ...
C: trimming A tails: clip3pAdapterSeq in star vs cutadapt by genomax ♦ 70k
With small RNA you may just want to use `bowtie` v.1 instead of `STAR`. Clip the poly-A's using `...
C: Filtering GFF3 file by finswimmer ♦ 12k
Hello https://www.biostars.org/u/3667/ , what your method is doing, is iterate over all `gene`'s...
A: cd-hit log file by Mensur Dlakic • 630
I suggest you run your job in the background, redirect all of its outputs (both `stdout` and `std...
C: Extracting important gene with similar expression level from multiple samples by piyushjo • 160
Follow the example in the link below. It will help you get correlated gene cohorts and also do so...
C: Extracting important gene with similar expression level from multiple samples by bharata1803 • 420
I am familiar with WGCNA, which function that you refer? I only know WGCNA for building network f...
A: procedure to build a Kallisto index for the genome hg19+ERCC+18S/28S by genomax ♦ 70k
- Get protein coding transcript sequences [for hg19 genome build][1] from GENCODE (see below). ...
C: Biopython installation/set path fails in conda env by RamRS ♦ 23k
Can you do the following experiments and see where things break: 1. Open python within the `mod...
C: Biopython installation/set path fails in conda env by salamandra • 230
doesn't work with Bio either. Even after adding to path of system variables: `C:\Users\Tania\.con...
C: cd-hit log file by RamRS ♦ 23k
Please google it (and run `man screen`), it's really simple to use. Run `screen` to start a scree...
C: bioinformatics .tar.gz software Installation on windows by vafamayahi • 0
thanks dear @RamRS for your help

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