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extremly low properply paired rate using bowtie2
atacseq bowtie2 sequencing written 24 days ago by ljj_20160 • updated 24 days ago by ATpoint34k
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visualize my .BAM file in IGV
.bam alignment rna igv bowtie2 written 6 weeks ago by christiangriffioen20 • updated 6 weeks ago by Pierre Lindenbaum128k
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bowtie2 filter for maximum alignment score
bowtie2 alignment written 3.3 years ago by rishi10 • updated 10 weeks ago by Biostar ♦♦ 20
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BAM detect unalign region
bowtie2 written 3 months ago by muhammad.zarulhanifah0 • updated 3 months ago by Pierre Lindenbaum128k
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Finding gene matches using sequence reads?
reads bowtie2 metagenomic written 3 months ago by anabaena0 • updated 3 months ago by Fatima590
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anomalous alignment with bowtie2
bowtie2 alignment bowtie blast score written 4 months ago by mark.rose40 • updated 4 months ago by genomax83k
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Not sure if pipe from bowtie2 to samtools is working?
chip-seq syntax samtools bowtie2 pipes written 4 months ago by ejwright0 • updated 4 months ago by ATpoint34k
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Does bowtie2 take gz input files?
bowtie2 gzip input gz fq.gz gzip written 7 months ago by f.dinesh0 • updated 6 months ago by Biostar ♦♦ 20
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How to view read mapping from Bowtie2, Samtools, etc
bowtie2 samtools bowtie readmapping written 7 months ago by ksipes0 • updated 7 months ago by Asaf7.6k
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Aligning multiple Fastq files using Bowtie2
bowtie2 fastq alignment rna-seq written 7 months ago by deepak1810 • updated 7 months ago by WouterDeCoster43k
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Bowtie2 Error: *.* has more quality values than read characters
software error bowtie2 fastq written 8 months ago by rbronste360 • updated 7 months ago by Biostar ♦♦ 20
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Bowtie2 alignment help for ATAC-seq
bowtie2 alignment data analysis atac-seq written 8 months ago by mrs.whirly0 • updated 8 months ago by ATpoint34k
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