Showing: bowtie2reset
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Should alignments with low query cover be removed?
bowtie2 abnormal alignments blastn written 2 days ago by 9324770020 • updated 2 days ago by Buffo490
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536
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1
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Error message produced by bowtie2 (HiC-Pro)
bowtie2 hic-pro hichip alignment written 5 months ago by Gary410 • updated 4 days ago by ashwinkelkar10
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Bowtie2-build cannot build an index
bowtie2 index written 8 months ago by Gary410 • updated 7 days ago by Biostar ♦♦ 20
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Mapping contigs & scaffolds to ref genome?
assembly mapping bowtie2 written 4 weeks ago by YOUSEUFS10 • updated 29 days ago by colindaven370
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STAR/ Bowtie2: number of matched base
bowtie2 ngs alignment star written 4 weeks ago by Chris_AI20 • updated 4 weeks ago by Devon Ryan73k
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bowtie2 : different MAPQ if -k is set
bowtie2 mapq written 4 weeks ago by Nicolas Rosewick5.7k • updated 4 weeks ago by h.mon9.2k
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6 follow
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Issue with installing bowtie2
bowtie2 error installing written 9 months ago by seta920 • updated 5 weeks ago by Snijesh VP180
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Issue with bowtie2-align during installation of bowtie2
bowtie2-align bowtie2 installation written 9 months ago by seta920 • updated 5 weeks ago by Snijesh VP180
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Bowtie2: gtf file - annotation file
gtf bowtie2 aligner written 7 weeks ago by KVC_bioinfo200 • updated 7 weeks ago by Devon Ryan73k
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Which mapping tool takes read quality score into account
bowtie2 mapping bwa quality score written 9 weeks ago by Chen570 • updated 9 weeks ago by h.mon9.2k
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Bowtie2 alignment: Reads that aligned concordantly >1 times
bowtie2 alignment map bowtie score written 3.2 years ago by elfeusilva0 • updated 10 weeks ago by Biostar ♦♦ 20
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bowtie2: multi mapping Summary report
bowtie2 written 11 weeks ago by KVC_bioinfo200 • updated 11 weeks ago by Devon Ryan73k
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How to identify bowtie2 unique mapping using sam flag value?
flag bowtie2 sam rna-seq written 22 months ago by jinxinhao19880 • updated 11 weeks ago by Biostar ♦♦ 20
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how is TLEN calculated in bowtie2
bowtie2 alignment sam tlen bowtie written 3 months ago by shim0 • updated 11 weeks ago by Biostar ♦♦ 20
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192
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Bowtie2 output alignments and non-alignments in same file
bowtie2 rna-seq written 12 weeks ago by zhangzhenyusz20 • updated 12 weeks ago by Brian Bushnell14k
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Can bowtie2 mapping paired-end reads of different length?
genome bowtie2 written 12 weeks ago by whiteeagle11510 • updated 12 weeks ago by Bioaln230
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5 follow
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Error in bowtie2
genome bowtie2 mapping written 12 weeks ago by whiteeagle11510
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Error: segment-based junction search failed with err =-5
bowtie2 tophat rna-seq written 18 months ago by ihabyounis20 • updated 12 weeks ago by Isaac C. Joseph 40
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Bowtie2 orientation mapping question
bowtie2 discordantly orientation written 3 months ago by AndrĂ©s Ribone0 • updated 3 months ago by Devon Ryan73k
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14 follow
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How To Extract Reads-Pairs Aligned Concordantly Exactly 1 Time?
bowtie2 mapping written 3.7 years ago by Rahul Sharma520 • updated 3 months ago by josm0
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