Showing: bowtie2reset
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2
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ChIPseq paired-end bowtie2 concern regarding biological replicates
bowtie2 paired-end chip-seq written 4.6 years ago by NHEJ320 • updated 2 days ago by Biostar ♦♦ 20
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80
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Bowtie2 MAPQ difference using local vs end-to-end alignment
bowtie2 alignment target ngs written 6 days ago by polys0 • updated 6 days ago by benformatics640
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3
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3
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bowtie2-align died with signal 11 (SEGV) (core dumped)
bowtie2 written 2.3 years ago by cvu130 • updated 7 days ago by sushuaikun0
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19
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6
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348
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7 follow
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Bowtie 2 error?
bowtie2 chip-seq aligne written 10 days ago by star130
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0
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199
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Iterative trimming using bowtie
bowtie2 iterative trimming alignment atac-seq written 8 weeks ago by ancient_learner610 • updated 19 days ago by Biostar ♦♦ 20
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How to remove bam files that don't contain matching reads
bowtie2 bam samtools written 20 days ago by samlambrechts299130 • updated 20 days ago by Pierre Lindenbaum118k
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0
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bowtie2 and FLASh
bowtie2 written 23 days ago by Fedster30
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ERROR: bowtie2 align exited with value 1
bowtie2 next-gen appimage alignment written 5 weeks ago by dharris85730 • updated 5 weeks ago by h.mon24k
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2
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bowtie2-align exited with value 139
software error bowtie2 next-gen alignment assembly written 17 months ago by anu014160 • updated 7 weeks ago by msg0
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6
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1
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235
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5 follow
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Help with .sam files _1,_2 from bowtie2 output into svDetect
genome assembly alignment svdetect bowtie2 written 3 months ago by sxd0 • updated 3 months ago by RamRS20k
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0
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1
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Bowtie2 align not working
bowtie2 windows align written 4.8 years ago by K.Nijbroek100 • updated 3 months ago by Biostar ♦♦ 20
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4
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238
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How to extract read-pairs that aligned multiple times?
bowtie2 samtools written 4 months ago by fanicesiza10 • updated 3 months ago by Biostar ♦♦ 20
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1
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3
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0
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321
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6
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1
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5 follow
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How to extract mapping features of multiple samples in one output?
bowtie2 chip-seq mapping multiqc rna-seq written 4 months ago by star130 • updated 4 months ago by h.mon24k
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Bowtie2 Reads that aligned concordantly exactly 1 time
bowtie2 samtools written 3.9 years ago by AW350 • updated 4 months ago by Biostar ♦♦ 20
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how to extract counts from bam/merge-bam without gtf
R samtools bowtie2 rna-seq hisat2 written 4 months ago by Shahzad10 • updated 4 months ago by michael.ante3.2k
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bowtie2 error: Read .... has more quality values than read characters.
assembly bowtie2 error read written 5 months ago by c.clarido40 • updated 4 months ago by Biostar ♦♦ 20
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1
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Please tell me what's wrong with my tophat script?
bowtie2 tophat bowtie1 written 4 months ago by abdul.suboor1230 • updated 4 months ago by WouterDeCoster37k
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sam file not showing multi mapped reads
bowtie2 sam written 6 months ago by Moses60 • updated 4 months ago by Biostar ♦♦ 20
3
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1
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275
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very low Bowtie2 mapping rate
bowtie2 written 4 months ago by afli170
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