Showing: bowtie2reset
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3
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More loose criteria for bowtie2 mapping
bowtie2 mapping assembly written 2.9 years ago by vasilislenis80 • updated 3 days ago by predeus400
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130
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6
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7 follow
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BWA MEM vs BOWTIE2 , which is best?
bwamem bowtie2 alignment rna-seq written 9 days ago by biofolk0 • updated 8 days ago by h.mon10k
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111
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3
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How to calculate bowtie2 run time using python
bowtie2 alignment rna-seq python written 13 days ago by biofolk0 • updated 13 days ago by Devon Ryan75k
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129
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BWA vs. bowtie
bowtie2 ngs bwa written 20 days ago by blur60 • updated 20 days ago by Devon Ryan75k
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2
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126
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bowtie2 messes up headers with sequences in output
bowtie2 sam written 5 weeks ago by chefarov80 • updated 5 weeks ago by michael.ante2.0k
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0
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187
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4
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259
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Multiple fastq alignment with bowtie2
bowtie2 fastq alignment written 8 weeks ago by martyferr9030 • updated 8 weeks ago by Devon Ryan75k
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211
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1
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3
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Set maximum insert size with BWA MEM?
bowtie2 atac-seq bwa written 8 weeks ago by James Ashmore2.3k • updated 8 weeks ago by Istvan Albert ♦♦ 75k
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137
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Should alignments with low query cover be removed?
bowtie2 abnormal alignments blastn written 10 weeks ago by 9324770020 • updated 10 weeks ago by Buffo630
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665
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1
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Error message produced by bowtie2 (HiC-Pro)
bowtie2 hic-pro hichip alignment written 7 months ago by Gary430 • updated 10 weeks ago by ashwinkelkar10
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Bowtie2-build cannot build an index
bowtie2 index written 10 months ago by Gary430 • updated 10 weeks ago by Biostar ♦♦ 20
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3
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237
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Mapping contigs & scaffolds to ref genome?
assembly mapping bowtie2 written 3 months ago by YOUSEUFS10 • updated 3 months ago by colindaven470
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1
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179
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1
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STAR/ Bowtie2: number of matched base
bowtie2 ngs alignment star written 3 months ago by Chris_AI20 • updated 3 months ago by Devon Ryan75k
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189
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1
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bowtie2 : different MAPQ if -k is set
bowtie2 mapq written 3 months ago by Nicolas Rosewick6.0k • updated 3 months ago by h.mon10k
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6 follow
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Issue with installing bowtie2
bowtie2 error installing written 11 months ago by seta930 • updated 3 months ago by Snijesh VP180
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999
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Issue with bowtie2-align during installation of bowtie2
bowtie2-align bowtie2 installation written 11 months ago by seta930 • updated 3 months ago by Snijesh VP180
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252
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2
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Bowtie2: gtf file - annotation file
gtf bowtie2 aligner written 4 months ago by KVC_bioinfo240 • updated 4 months ago by Devon Ryan75k
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0
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1
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247
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Which mapping tool takes read quality score into account
bowtie2 mapping bwa quality score written 4 months ago by Chen590 • updated 4 months ago by h.mon10k
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233
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bowtie2 malformed sam/bam files
bowtie2 mapping written 4 months ago by Damian Kao14k
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Bowtie2 alignment: Reads that aligned concordantly >1 times
bowtie2 alignment map bowtie score written 3.4 years ago by elfeusilva0 • updated 4 months ago by Biostar ♦♦ 20
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248
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