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<prev • 8 results • page 1 of 1 • next >
18
votes
0
answers
624
views
0
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Tool: elPrep 4.0.0, a high-performance drop-in replacement tool for GATK4/Picard/SAMtools for processing SAM/BAM files
bam sam sort markduplicates bqsr tool written 7 weeks ago by Charlotte.Herzeel • 120 • updated 6 weeks ago by Leonor Palmeira ♦ 3.6k
0
votes
0
answers
148
views
0
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Adam Transform BQSR result is different with Gatk
gatk bqsr adam written 3 months ago by zhangnew • 0
2
votes
1
answer
231
views
1
answer
error using bqsr and incompatible contigs
gatk bqsr written 4 months ago by cmccabe • 170 • updated 4 months ago by h.mon ♦ 21k
3
votes
1
answer
231
views
1
answer
multithread support for gatk
gatk bqsr written 4 months ago by cmccabe • 170
1
vote
0
answers
388
views
0
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GATK4 BaseRecalibrator and Target region (whole exome data)
gatk4 bqsr written 5 months ago by oghzzang • 30
21
votes
2
answers
1.5k
views
8 follow
2
answers
BQSR: when it is applicable?
gatk bqsr base quality written 13 months ago by lamteva.vera • 130 • updated 13 months ago by finswimmer ♦ 7.8k
2
votes
1
answer
796
views
1
answer
Is it necessery to perform GATK-BQSR before performing variant calling using freebayes.
gatk bqsr freebayes written 21 months ago by sktbanerjee1 • 30 • updated 21 months ago by finswimmer ♦ 7.8k
0
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0
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1.1k
views
0
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BamUtil for Base Qual Recalibration
gatk bqsr basequal recalibration recal written 4.0 years ago by Danielk • 550
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