Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: bqsr • reset
or   Classic search
<prev • 12 results • page 1 of 1 • next >
0
votes
0
answers
74
views
0
answers
Population / Reference bias in GATK BQSR BaseRecalibrator?
population bias gatk bqsr non model organism written 22 days ago by Andrés Ribone • 0
1
vote
0
answers
105
views
0
answers
Any recommendations for improving Base Quality Score Recalibration (BQSR) for non-model organisms?
next-gen bqsr variant_calling written 12 weeks ago by elcortegano • 10
23
votes
2
answers
3.0k
views
13 follow
2
answers
BQSR: when it is applicable?
gatk bqsr base quality written 2.1 years ago by lamteva.vera • 160 • updated 4 months ago by demolidd77 • 40
8
votes
1
answer
481
views
7 follow
1
answer
FastQC before and after Base Quality Score Recalibration (BQSR)
gatk bqsr snp fastqc written 6 months ago by alicia.poppy • 40
4
votes
1
answer
538
views
5 follow
1
answer
GATK quality recalibration to get recalibrated BAM files before SNP calling
gatk bqsr recalibration snp written 6 months ago by alicia.poppy • 40 • updated 6 months ago by Nicolas Rosewick ♦ 8.5k
21
votes
2
answers
1.4k
views
5 follow
2
answers
Tool: elPrep 4.0.0, a high-performance drop-in replacement tool for GATK4/Picard/SAMtools for processing SAM/BAM files
bam sam sort markduplicates bqsr tool written 13 months ago by Charlotte.Herzeel • 140
2
votes
1
answer
679
views
1
answer
error using bqsr and incompatible contigs
gatk bqsr written 16 months ago by bioguy24 • 190 • updated 10 months ago by Biostar ♦♦ 20
0
votes
0
answers
338
views
0
answers
Adam Transform BQSR result is different with Gatk
gatk bqsr adam written 15 months ago by zhangnew • 0
3
votes
1
answer
563
views
1
answer
multithread support for gatk
gatk bqsr written 16 months ago by bioguy24 • 190
1
vote
0
answers
923
views
0
answers
GATK4 BaseRecalibrator and Target region (whole exome data)
gatk4 bqsr written 18 months ago by oghzzang • 40
2
votes
1
answer
1.1k
views
1
answer
Is it necessery to perform GATK-BQSR before performing variant calling using freebayes.
gatk bqsr freebayes written 2.7 years ago by sktbanerjee1 • 30 • updated 2.7 years ago by finswimmer ♦ 13k
0
votes
0
answers
1.4k
views
0
answers
BamUtil for Base Qual Recalibration
gatk bqsr basequal recalibration recal written 5.0 years ago by Danielk • 570
<prev • 12 results • page 1 of 1 • next >
Recent Votes
Recent Locations • All »
  • Canada, 5 minutes ago
  • United States, 6 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1229 users visited in the last hour