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Recent Replies
Comment: How to extract sequences from fasta that have a certain length ?
by
GenoMax
99k
That is fine. People can find these solutions via search in future in one spot.
Comment: How to extract sequences from fasta that have a certain length ?
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v.berriosfarias
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THanks so much for your answer, what I need is to make a new fasta that have sequences that have a length range between 50-100. those links…
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I prefer `source('~/MyRScripts/myscript.R')` to creating a package and loading it every time. Of course, one should only store reusable cod…
Answer: How to extract sequences from fasta that have a certain length ?
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See solutions in: https://www.biostars.org/p/79202/<br>
https://www.biostars.org/p/329680/<br>
https://stackoverflow.com/questions/62066578…
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raisamathenge
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Is it possible that I can compare it using just the stimuli within my colData matrix?
Answer: Plotting Differential Induced Genes across timepoints in DESEQ2
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raisamathenge
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I have had problems with using an interaction term between stimulus and timepoint that was not able to run as well. How can I fix that? I w…
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The sequencing coverage is >200x
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I don't think you need the "1" in the design; I've never seen that in any DESeq tutorial.
What your design will do is compare the betas …
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![Here is my ColData][1]
[1]: /media/images/f2f1b815-3669-4525-9636-c6dc193e
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Calculating statistics, be it Z- or whatever score, is still based on some kind of data, and I wonder whether it is motifs or actual bindin…
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Seconding that. I strongly encourage everyone to wrap commonly used code and functions as simple packages and put them on Github. This allo…
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This post is off topic as not bioinformatics-related. I suggest you ask this in a suitable subreddit or at ResearchGate (or similar platfor…
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Can you show your `colData` to understand how the groups are set up?
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cross posted: https://stackoverflow.com/questions/67060118/
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