burdentest Posts

Latest

Open

RNA-Seq

ChIP-Seq

SNP

Assembly

Tutorials

Tools

Jobs

Forum

Planet

All »

Home

Welcome to Biostar! about • faq • rss

Community

Log In

Sign Up

Add New Post

Showing selected topics • reset

or Classic search

votes

answers

186

views

answers

Burden Test for whole exome sequencing data running into errors

sequencing plinkseq burdentest written 7 months ago by shraimrawan • 0 • updated 7 months ago by RamRS ♦ 27k

Recent Votes

Recent Locations • All »

Recent Awards • All »

Appreciated to ATpoint ♦ 35k
Autobiographer to dominguez.matias • 0
Teacher to Kevin Blighe ♦ 60k
Teacher to ATpoint ♦ 35k
Student to carroll • 30
Good Answer to chrchang523 ♦ 6.9k

Recent Replies

C: Constructing phylogeny tree based on bacterial core genes by andersonlee • 0
Thanks for the help! I'm on Mac and changing the PATH variable worked for me: export JAVA_HO...
C: How to colour all points that agree with multiple conditions by cpad0112 ♦ 13k
try `ifelse` in col option
C: Filtering Augustus GTF based on protein sequence by Juke34 • 4.1k
You can filter the GFF by the ORF length using `agat_sp_filter_by_ORF_size.pl` from [AGAT][1] ...
A: annotate unknown peptides by fasta reference by genomax ♦ 84k
`blat` can be very handy here since you are looking for very similar sequences. No need to create...
C: Question about using OmicsBox for BLAST results by JC ♦ 10k
As a commercial software, you should contact them support@biobam.com
C: Need help with STAR aligner by JC ♦ 10k
STAR is not intended to be used in a Laptop, maybe Salmon or Kallisto is better for this
A: annotate unknown peptides by fasta reference by JC ♦ 10k
Align your sequences with [Blast][1] or [Fasta][2], save your results as table (-outfmt 6) and pa...
C: How to generate GTF file ? by sunnykevin97 • 50
its a non-model species.
C: Genes on chromosome by lieven.sterck ♦ 7.8k
if it's a plant species you're working with you might have a look at PLAZA, especially the WGMapp...
A: How to colour all points that agree with multiple conditions by caggtaagtat • 1.0k
If res.sLFCdf is da data frame, you could do something like res.sLFCdf$coloring <- "not" ...
C: Genes on chromosome by Pierre Lindenbaum ♦ 128k
https://www.biostars.org/p/378/
C: How to colour all points that agree with multiple conditions by RamRS ♦ 27k
Add another field that reflects if the conditions are satisfied and color based on that field?

Content

Help

About
FAQ

Access

RSS
Stats
API

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Traffic: 1563 users visited in the last hour