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bwa mem mismatch option
bwa mem written 6.0 years ago by Varun Gupta1.1k
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22 follow
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When and why is bwa aln better then bwa mem?
comparison bwa mem bwa aln written 5.9 years ago by dariober11k • updated 5.9 years ago by Istvan Albert ♦♦ 84k
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4
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10 follow
4
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Aligning paired end fastq files dumped from SRA
sra fastq bwa mem paired written 5.8 years ago by Zev.Kronenberg11k • updated 2.8 years ago by seelament0
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parameters in bwa mem
parameters tools bwa mem bwa written 4.6 years ago by BioinfoNovice110
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3.4k
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1
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calling BWA mem from within python
python bwa mem written 4.3 years ago by lien90 • updated 4.3 years ago by Picasa540
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1
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1
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insert size discrepencies using bwa backtrack and bwa mem
bwa-backtrack bwa mem insert written 4.3 years ago by urmi20830 • updated 4.3 years ago by lh332k
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2
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1.9k
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2
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2
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1
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1.3k
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paired reads (headers) show up in 3 lines of sam file instead of expected 2
alignment bwa mem sam written 4.2 years ago by raplayer10 • updated 4.2 years ago by Damian Kao15k
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1.4k
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BWA option for FR sens only
bwa mem written 3.8 years ago by Picasa540
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1.4k
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Weird issue with bam file generated by samtools
samtools bam bwa mem written 3.7 years ago by lakhujanivijay5.2k • updated 3.7 years ago by Devon Ryan96k
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3.9k
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Mismatch setting for bwa mem ?
bwa mem mismatch written 3.7 years ago by Picasa540
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3
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3.0k
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3
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11
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1
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2.3k
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9 follow
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Oxford Nanopore BWA MEM alignments
long reads bwa mem bwa oxford nanopore written 3.4 years ago by QVINTVS_FABIVS_MAXIMVS2.4k • updated 3.4 years ago by WouterDeCoster44k
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5 follow
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Is my file created completely
sam file bwa mem written 3.4 years ago by micro32uvas10 • updated 3.4 years ago by h.mon31k
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1
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bwa mem misaligns my contigs to the reference by a few bases
contig alignment bwa mem bwa bwt written 3.2 years ago by cristian240 • updated 2.2 years ago by Biostar ♦♦ 20
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2.0k
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bwa mem segfault
segfault bwa mem bwa written 3.0 years ago by lindsay.liang20
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1
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987
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Mapping Illumina reads using BWA
assembly bwa mem mapping bwa sequencing written 2.8 years ago by James20 • updated 2.8 years ago by h.mon31k
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5 follow
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QC-passed reads in BWA aln and BWA mem
alignment bwa mem bwa qc-passed bwa aln written 2.4 years ago by kai10 • updated 2.4 years ago by swbarnes28.6k
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807
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illumina data analysis with bwa mem
bwa mem written 2.2 years ago by bioguy24190 • updated 2.2 years ago by Devon Ryan96k
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bwa mem cannot locate output bam file
bwa mem rna-seq written 2.1 years ago by alexadeanfitz10 • updated 2.1 years ago by ATpoint38k
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1
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499
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5 follow
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bwa mem low depth and fluctuating plot
bwa mem samtools written 24 months ago by ieie10 • updated 24 months ago by singh.vijender30
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1
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1
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3
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590
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5 follow
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3
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856
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bwa mem -R (RGline) format for DNBseq fastq
wgs dnbseq bwa mem fastq bwa written 13 months ago by joe140 • updated 5 days ago by xxa0
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BWA aligning forward and reverse differently
bwa mem written 26 days ago by dorothea.emig0 • updated 26 days ago by h.mon31k
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