Showing: bwareset
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8 follow
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6 follow
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for loop over bwa aln
alignment next-gen bwa written 7 days ago by phylofun10 • updated 7 days ago by jrj.healey10.0k
2
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2.2k
views
0
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Mapping Quality Issues With Bwa/Stampy Hybrid Alignment
alignment bwa written 5.9 years ago by oadaily20 • updated 9 days ago by zhangtaonju0
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1
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113
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1
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different bam from same NGS data
bam bwa written 11 days ago by gab20 • updated 11 days ago by jsporter60
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2
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Does The Mapping Of A Read'S Pair Affect Its Own Mapping Score In Bwa?
paired-end mapping bwa written 5.0 years ago by jhrf10 • updated 12 days ago by Biostar ♦♦ 20
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276
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5 follow
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0
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107
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0
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3
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688
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0
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0
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1
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171
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5 follow
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Extracting the full read ID when converting from BAM -> FASTQ
fastq bam samtools bwa written 6 weeks ago by ttmigueltt0 • updated 6 weeks ago by toralmanvar730
4
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1
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136
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1
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7
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2
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335
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6 follow
2
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How to retain SEQ and QUAL fields in BAM file after filtering?
bam samtools bwa written 6 weeks ago by toddknutson50 • updated 6 weeks ago by Pierre Lindenbaum116k
6
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1
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238
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1
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How to remove singletons in a BAM file using samtools
singletons alignment samtools bwa written 6 weeks ago by neranjan0 • updated 6 weeks ago by finswimmer9.0k
3
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1
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182
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1
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Issues with Marking Duplicates in Picard
gatk picard samtools sorting bwa written 6 weeks ago by sarah.kettelkamp0 • updated 6 weeks ago by goodez420
2
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2
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145
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2
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6
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1
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172
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1
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1
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1
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149
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1
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BWA.KIT where can i find it? Very confused
alt_mapping bwa bwakit written 7 weeks ago by Duarte Molha200 • updated 7 weeks ago by finswimmer9.0k
1
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1
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176
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1
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bwa is getting stuck
mem alignment bwa rna-seq written 9 weeks ago by joomi0
6
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1
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183
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1
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bwa mem -R or samtools view -T
bwa written 9 weeks ago by flystar2330
7
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1
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216
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1
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Only females but still few reads map to Y chromosome
wgs alignment bwa written 9 weeks ago by serpalma.v20 • updated 9 weeks ago by Pierre Lindenbaum116k
2
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2
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5.2k
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2
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Bwa Mismatches And Seed Length
bwa written 6.2 years ago by GPR310 • updated 10 weeks ago by Biostar ♦♦ 20
1
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1
answer
156
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1
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BWASW and _alt alleles
alignment bwa blat written 10 weeks ago by Maximilian Haeussler1.3k
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167
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0
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0
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0
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259
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0
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3
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239
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5 follow
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Merging BWT indices for BWA
merge bwt read aligner bwa written 12 weeks ago by rgc25510
4
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1
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201
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1
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How to generate a BAM/SAM file to show a mutation using BWA aligner
alignment snp bwa written 3 months ago by neranjan0 • updated 3 months ago by h.mon22k
1
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1
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177
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1
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Is BWA consider insert size when define read mapped in proper pair
alignment bwa sequencing written 3 months ago by Medhat8.1k • updated 3 months ago by Pierre Lindenbaum116k
0
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1
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306
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1
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Alignment to contings with Illumina pe with bwa or minimap2?
minimap2 pilon alignment bwa canu written 3 months ago by likoo270 • updated 3 months ago by h.mon22k
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0
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181
views
0
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BWA inexact matching
alignment bwa written 3 months ago by chirag.agrawal.910 • updated 3 months ago by genomax60k
1
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1
answer
187
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1
answer
BWA alignment query
alignment bwa written 3 months ago by chirag.agrawal.910 • updated 3 months ago by swbarnes24.7k
0
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1
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171
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1
answer
BWA: Read flagged as unmapped, but mate says mate is mapped.
bwa written 3 months ago by i.sudbery3.2k • updated 3 months ago by t.kuilman720
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