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<prev • 631 results • page 1 of 22 • next >
0
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105
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1
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Mapping of long read to extremely small reference sequence
bowtie2 small reference mapping bwa written 22 days ago by Rajesh Detroja • 60
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0
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80
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0
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BWA alignment error
assembly alignment bwa written 11 days ago by alhafidzhamdan • 0
9
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1
answer
112
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1
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bwa parallel on a SLURM cluster
bwa written 13 days ago by little_more • 10
0
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0
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129
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0
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Quality of Mapping using bwa flagstat
flagstat bwa single end reads illumina written 9 weeks ago by BeetleCheers • 0 • updated 15 days ago by Biostar ♦♦ 20
3
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2
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116
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5 follow
2
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bwa mem: fail to locate the index files
bwa written 18 days ago by little_more • 10 • updated 18 days ago by ole.tange • 3.5k
2
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1
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104
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1
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Error : Could not build fai index
samtools bwa written 19 days ago by manubiomed20 • 0
5
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1
answer
166
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6 follow
1
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using GNU parallel for bwa mem and samtools
parallel samtools bwa written 20 days ago by little_more • 10 • updated 20 days ago by ole.tange • 3.5k
0
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1
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92
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1
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.fai index in BWA / bowtie / bowtie2 / minimap2
minimap2 bowtie2 bwa bowtie index written 20 days ago by Severus Snape • 0 • updated 20 days ago by h.mon ♦ 26k
8
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0
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202
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5 follow
0
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Pipe SamToFastq, BWA mem not working
gatk sam bwa pipe written 4 weeks ago by abbysue • 10 • updated 22 days ago by Biostar ♦♦ 20
4
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1
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136
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1
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BWA mapping parameters for DNA capture sequencing protocol
alignment dna-seq bwa capture written 27 days ago by graeme.thorn • 40
0
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0
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63
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0
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How to get an exact match from the bam alignment file
bam samtools bwa written 28 days ago by xiaoguang • 10
0
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0
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134
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0
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BWA mem failing to locate index files
bwa index written 4 weeks ago by aalith • 0
1
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1
answer
92
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1
answer
BWA index getting killed
fastq bam bwa index written 4 weeks ago by abbysue • 10 • updated 4 weeks ago by swbarnes2 ♦ 6.1k
1
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0
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292
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0
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BWA - [fread] Input/output error
software error alignment bwa written 5 months ago by egeulgen • 810
1
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0
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174
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0
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differences between bwa-mem paired and single reads
alignment bwa written 5 weeks ago by vmicrobio • 240
3
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1
answer
183
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1
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Error: [bwa_idx_load_from_disk] fail to locate index
software error bwa bash written 6 weeks ago by kchenforyou • 0 • updated 6 weeks ago by Kevin Blighe ♦ 46k
1
vote
0
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99
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0
answers
Filtering human reads in metagenomics: should supplementary reads be removed?
flagstat metagenomics dna-seq samtools bwa written 6 weeks ago by ciemanek • 110
3
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1
answer
111
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1
answer
bwa job - error with file size
fastq alignment bwa rna-seq sam written 8 weeks ago by Laura SMC • 0
19
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2
answers
16k
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10 follow
2
answers
How To Generate Alignment Statistics Report?
exome bwa written 7.5 years ago by Angel • 210 • updated 8 weeks ago by Biostar ♦♦ 20
0
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0
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147
views
0
answers
Insert size distribution for BWA
genome sequencing insert size bwa written 9 weeks ago by seta • 1.2k
3
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1
answer
189
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1
answer
BWA MEM Definition of a Primary Alignment
wgs mem alignment bwa hts written 9 weeks ago by QVINTVS_FABIVS_MAXIMVS • 2.3k • updated 9 weeks ago by d-cameron • 2.1k
0
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447
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5 follow
0
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Skip orientation as there are not enough pairs by bwa mem
paired end sequencing whole genome bwa written 10 weeks ago by seta • 1.2k
0
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0
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151
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0
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CIGAR inconsistency BWA/GATK
genome sequence alignment samtools bwa written 11 weeks ago by ncoca • 0
1
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0
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170
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0
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BWA alignment and very low properly paired
alignment bwa igv written 11 weeks ago by seta • 1.2k • updated 11 weeks ago by swbarnes2 ♦ 6.1k
3
votes
1
answer
208
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1
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BWA mapping to multiple reference genome
multiple reference mapping bwa written 12 weeks ago by gerrybio2010 • 0 • updated 12 weeks ago by swbarnes2 ♦ 6.1k
1
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0
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181
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0
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Confused about read pair orientation in bam
alignment paired end bwa bam written 12 weeks ago by malthesr • 10
0
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0
answers
114
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0
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Proovread terminated with error
proovread bwa written 12 weeks ago by prp291 • 50
3
votes
5
answers
716
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8 follow
5
answers
Generating consensus sequence from bam file
genome fasta samtools bwa written 5 months ago by chparada • 0 • updated 3 months ago by guillaume.rbt • 620
1
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0
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105
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0
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How can bam file only retain potential variants?
samtools sam bwa written 3 months ago by gerrybio2010 • 0
0
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1
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196
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1
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What does % properly aligned pairs means when using BWA alignment? Why removing -P?
alignment stats bwa written 3 months ago by mlope921 • 0 • updated 3 months ago by h.mon ♦ 26k
<prev • 631 results • page 1 of 22 • next >
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