Showing: bwareset
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3
votes
1
answer
58
views
1
answer
Why does BWA sometimes omit X0 and X1 tags?
burrows-wheeler aligner alignment dna-seq bwa written 16 hours ago by b10hazard30 • updated 15 hours ago by h.mon28k
8
votes
1
answer
364
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6 follow
1
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Pipe SamToFastq, BWA mem not working
gatk sam bwa pipe written 4 months ago by abbysue10 • updated 1 day ago by Marco Pessoa0
3
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2
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115
views
2
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BWA index - is it neccesary?
bwa index written 12 days ago by Hansen_86910 • updated 5 days ago by ATpoint26k
2
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0
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79
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0
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10
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2
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81
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7 follow
2
answers
1
vote
1
answer
72
views
1
answer
running bwa in pair end reads
sorted aligment rna-seq bwa written 14 days ago by luzglongoria20 • updated 14 days ago by Devon Ryan92k
5
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2
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117
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6 follow
2
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0
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1
answer
125
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1
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0
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0
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94
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0
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0
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116
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0
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3
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1
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128
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1
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0
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0
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125
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0
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0
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0
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101
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0
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3
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0
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296
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0
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bwa mem -R (RGline) format for DNBseq fastq
wgs dnbseq bwa mem fastq bwa written 12 weeks ago by joe120 • updated 4 weeks ago by Biostar ♦♦ 20
2
votes
1
answer
150
views
1
answer
Question: BWA mem skip orientation
genome assembly next-gen bwa alignment written 5 weeks ago by BellaK0 • updated 5 weeks ago by ATpoint26k
41
votes
0
answers
27k
views
40 follow
0
answers
Tutorial: Mapping Reads With Bwa And Bowtie
tutorial bowtie bwa written 7.6 years ago by MSU course 2011500 • updated 6 weeks ago by ATpoint26k
0
votes
1
answer
222
views
1
answer
1
vote
1
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187
views
1
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What do you do after obtaining sorted bam files?
bam bwa written 7 weeks ago by DNAngel40 • updated 7 weeks ago by swbarnes27.0k
0
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0
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136
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0
answers
6
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1
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215
views
5 follow
1
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5
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2
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139
views
2
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BWA aln - failed to locate the index
bioinformatics alignment bwa written 8 weeks ago by m.wekking10 • updated 8 weeks ago by Pierre Lindenbaum124k
5
votes
1
answer
171
views
1
answer
bwa mem on lowpass wgs
wgs bwa written 8 weeks ago by igor0 • updated 8 weeks ago by WouterDeCoster42k
0
votes
1
answer
267
views
1
answer
sh: warning: setlocale: LC_ALL: cannot change locale (en_US.utf8)
perl bwa bash written 9 weeks ago by kspata60 • updated 9 weeks ago by Joe15k
0
votes
0
answers
179
views
0
answers
1
vote
1
answer
191
views
1
answer
How to get an exact match from the bam alignment file
bam samtools bwa written 4 months ago by xiaoguang10 • updated 12 weeks ago by yasokannan9320
3
votes
1
answer
170
views
1
answer
Best practice for handling multi mapping quality
gatk snp bwa written 3 months ago by clear.choi30 • updated 3 months ago by Brice Sarver3.2k
5
votes
1
answer
159
views
1
answer
Stop BWA from storing unmapped reads
alignment bwa written 3 months ago by CC30 • updated 3 months ago by ATpoint26k
0
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1
answer
176
views
1
answer
0
votes
0
answers
179
views
0
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BWA alignment error
assembly alignment bwa written 3 months ago by alhafidzhamdan0
10
votes
1
answer
204
views
6 follow
1
answer
bwa parallel on a SLURM cluster
bwa written 3 months ago by little_more20
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