Showing: bwareset
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Parallel for bwa mem - problem with -R argument for ID and SM
parallel alignment bwa written 12 months ago by Korsocius100 • updated 1 day ago by ATpoint14k
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How to Align to multiple reference genomes -> Discard multiply mapped reads?
alignment bwa cmd written 6 days ago by nattzy9410 • updated 6 days ago by h.mon23k
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Relative abundance fro metagenomics samples
metagenomics taxonomy relative abundance bwa written 2.2 years ago by David150 • updated 14 days ago by lagartija50
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Where To Get The Annotation File For The Nimblegen Seqcap Ez Exome V1
exome gatk variant bwa written 5.8 years ago by ewre220 • updated 14 days ago by 4779267570
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86
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152
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bwa: fail to locate the index files
alignment bwa written 4 weeks ago by raf.marcondes0 • updated 4 weeks ago by b.nota6.2k
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How To Force 'Bwa Samse' To Output Multiple Hits In .Sam Format?
sam bwa written 6.8 years ago by Leonor Palmeira3.7k • updated 6 weeks ago by Biostar ♦♦ 20
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mate_not_found ValidateSam (picardtools) error
alignment picard mapping bwa written 6 weeks ago by emi.trucchi0 • updated 6 weeks ago by finswimmer11k
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does bwa mem use base qualities?
bwa written 3.2 years ago by Richard550 • updated 6 weeks ago by rp70
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117
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bwa mem fastq order
bwa-mem fastq alignment bwa written 6 weeks ago by guffrann0 • updated 6 weeks ago by Pierre Lindenbaum117k
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177
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Best approach for parallelizing bwa mem over multiple CPUs
hpc parallel bwa written 7 weeks ago by olikidrod0 • updated 7 weeks ago by genomax63k
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6 follow
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Can BWA restart a calculation after a break?
samtools bwa written 7 weeks ago by DNAngel20 • updated 7 weeks ago by dariober9.9k
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for loop over bwa aln
alignment next-gen bwa written 8 weeks ago by phylofun10 • updated 8 weeks ago by jrj.healey11k
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Mapping Quality Issues With Bwa/Stampy Hybrid Alignment
alignment bwa written 6.0 years ago by oadaily20 • updated 9 weeks ago by zhangtaonju0
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different bam from same NGS data
bam bwa written 9 weeks ago by gab20 • updated 9 weeks ago by jsporter60
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Does The Mapping Of A Read'S Pair Affect Its Own Mapping Score In Bwa?
paired-end mapping bwa written 5.2 years ago by jhrf10 • updated 9 weeks ago by Biostar ♦♦ 20
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Extracting the full read ID when converting from BAM -> FASTQ
fastq bam samtools bwa written 3 months ago by ttmigueltt0 • updated 3 months ago by toralmanvar750
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How to retain SEQ and QUAL fields in BAM file after filtering?
bam samtools bwa written 3 months ago by toddknutson50 • updated 3 months ago by Pierre Lindenbaum117k
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How to remove singletons in a BAM file using samtools
singletons alignment samtools bwa written 3 months ago by neranjan0 • updated 3 months ago by finswimmer11k
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