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8
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Minimal example of using htslib from conda to build a simple c file?
C conda htslib written 12 months ago by Click downvote670 • updated 12 months ago by John Marshall1.8k
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Is there a single header file somewhere I can use to read bam?
bam C c++ written 12 months ago by Click downvote670 • updated 12 months ago by John Marshall1.8k
3
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491
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GNU autotools and samtools/htslib
samtools configure C autotools htslib written 13 months ago by Pierre Lindenbaum124k • updated 13 months ago by John Marshall1.8k
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632
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Is there a code to find consensus motif
python C shell awk written 15 months ago by vinayjrao140 • updated 15 months ago by Carlo Yague4.8k
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6 follow
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Faster reading sequences from a fastq file
fastq C written 22 months ago by brs111110 • updated 22 months ago by kloetzl1.1k
3
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extract_sv_reads/samblaster: explain this code please.
splicedread c++ C samblaster written 22 months ago by Pierre Lindenbaum124k • updated 22 months ago by gf4ea30
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Job: Computational Biologist / Bioinformatician, The Sanger Institute, Cambridge, UK
perl cc++ C job python written 2.2 years ago by Recruit230 • updated 2.2 years ago by genomax74k
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Job: Bioinformatician/ Senior Bioinformatician, Wellcome Trust Sanger Institute, Cambridge, UK
python oracle c++ C job written 2.4 years ago by Recruit230 • updated 2.4 years ago by genomax74k
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Resources to learn htslib and C/C++
c++ C htslib written 3.0 years ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 5 months ago by chernouhov sergey30
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error during installationi of KisSplice
c++ C rna-seq snp kissplice written 3.3 years ago by yoyofangliu0 • updated 2.9 years ago by vectorio91280
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C program to find complementary of DNA sequence
myposts C dna written 4.0 years ago by Arindam Ghosh200 • updated 4.0 years ago by Alex Reynolds29k
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htslib C API: getting reads from region
C api samtools htslib written 4.3 years ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 4.3 years ago by Pierre Lindenbaum124k
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16 follow
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Tool: Quick statistics from the command line
C tool statistics written 4.4 years ago by Kamil1.9k • updated 4.3 years ago by Istvan Albert ♦♦ 81k
1
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Blast implementation details help
C blast written 4.4 years ago by felipesulser0 • updated 4.4 years ago by h.mon28k
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Best HMM library for bioinformatics
hmm java C tool python written 4.9 years ago by Dave70 • updated 4.9 years ago by a.polo88100
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read multiple fasta sequence using kseq.h
kseq.h sequence C written 5.4 years ago by madhurima.das0 • updated 5.4 years ago by Alex Reynolds29k
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BLAST: Querying a single sequence without input file in C
C blast written 5.5 years ago by madhurima.das0 • updated 5.5 years ago by Pierre Lindenbaum124k
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How Reproducible Are The Results Programs Compiled With Blast Libs Vs Calling The Ncbi Binary?
C blast written 5.7 years ago by pld4.8k • updated 5.5 years ago by Biostar ♦♦ 20
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Running Blast With C
C blast written 5.7 years ago by pld4.8k • updated 5.7 years ago by Pierre Lindenbaum124k
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Compiling Samtools Bam_Plcmd.C For Mpileup Function Invalid Conversion Errors
samtools C written 6.4 years ago by coryprzy0 • updated 6.4 years ago by Alex Reynolds29k
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Nucleotide Determination In Samtools Pileup Function
samtools C mpileup written 6.4 years ago by coryprzy0 • updated 6.4 years ago by Malachi Griffith18k
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Multiple Sequence Alignment In C
multiple-alignment C written 6.5 years ago by Isaac Turner50 • updated 5.6 years ago by Biostar ♦♦ 20
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