Showing: callingreset
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 5 months ago by Macspider1.5k • updated 3 months ago by Biostar ♦♦ 20
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Variant Calling problem - find alternate heterozygous
vcf calling heterozygous variant written 10 months ago by Paul700 • updated 10 months ago by Zaag610
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INDEL and point mutation at same position in VCF
vcf indels calling snps alignment written 2.3 years ago by simono10120 • updated 13 months ago by Biostar ♦♦ 20
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Does anyone use Python for variant calling?
python ngs calling variant snp written 16 months ago by mhmtgenc8520 • updated 15 months ago by Zaag610
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SNP calling pipeline - testing different programs
snp calling mapping filtering written 2.4 years ago by Eric Normandeau9.5k • updated 18 months ago by alexisdereeper20
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Snp Calling With Bcftools Using Pileup File Format Instead Of Bcf
calling bcftools snp written 4.2 years ago by Justin430 • updated 2.7 years ago by Biostar ♦♦ 20
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Filtering Variant Calls Based On Genotype Quality
calling variant filtering written 4.9 years ago by Kssr110 • updated 2.8 years ago by Biostar ♦♦ 20
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Haplotype Calling
haplotype calling 454 sequencing written 5.1 years ago by Empyrean150 • updated 2.8 years ago by Biostar ♦♦ 20
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Tetraploid Snp Calling & Snp Filtering
quality calling samtools snp written 3.6 years ago by pavenhuizen60 • updated 3.6 years ago by Adrian Pelin2.0k
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How To Deal With Wild-Type Versus No-Calls In Exomes?
exome calling variant human written 3.6 years ago by Chris Cole630 • updated 3.6 years ago by Daniel Swan13k
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Realignertargetcreator --- Arrayindexoutofboundsexception
gatk next-gen calling variant written 5.2 years ago by sandeep.deverasetty60 • updated 3.8 years ago by Biostar ♦♦ 20
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How To Prepare Gatk .Vcf Files Output For Annovar ?
vcf gatk calling variant annovar written 4.2 years ago by newDNASeqer560 • updated 4.2 years ago by Malachi Griffith15k
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How To Interprete/Display .Vcf Data File?
vcf calling variant written 4.2 years ago by newDNASeqer560 • updated 4.2 years ago by alaincoletta60
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Paired-End Reads Alignment For Variant Calling ?
calling gatk paired-end picard variant written 4.2 years ago by newDNASeqer560 • updated 4.2 years ago by Ashutosh Pandey11k
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How To Call Cnvs From Raw Intensities
array illumina calling written 4.5 years ago by elengss0 • updated 4.5 years ago by Istvan Albert ♦♦ 73k
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State Of The Art In Base-Calling?
sanger calling sequencing written 4.6 years ago by asjo120 • updated 4.6 years ago by Gabriel R.2.0k
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Why There Are A Lot Of Mq0 Reads In Some Particular Regions?
calling variant written 4.7 years ago by lyz10302012260 • updated 4.7 years ago by swbarnes22.8k
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Haloplex & Allele Calling
next-gen samtools allele gatk calling duplicates written 4.7 years ago by Pierre Lindenbaum98k • updated 4.7 years ago by Daniel Swan13k
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Ways To Filter Noise From Rnaseq Data
calling variant rna-seq sequencing written 4.8 years ago by Wayne910 • updated 4.8 years ago by JC6.2k
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