Showing: callingreset
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GATK Panel Of Normals (PoN)
gatk beta calling variant written 7 months ago by b.d237100 • updated 7 weeks ago by esraesmeray199010
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Problems When Calling Snps Using Samtools Mpileup
calling samtools snp written 6.5 years ago by 20 • updated 8 weeks ago by Biostar ♦♦ 20
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Nanopore SNP and indels calling tool
snps indels tools calling nanopore written 11 months ago by tarek.mohamed250 • updated 6 months ago by WouterDeCoster39k
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How to detect False positive variant in repeat region ?
vcf calling bam written 15 months ago by istdasklar0 • updated 15 months ago by Kevin Blighe44k
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5 follow
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mpileup for PacBio reads
quiver calling pacbio mpileup variants written 2.2 years ago by Biomonika (Noolean)3.1k • updated 18 months ago by tjduncan230
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Detecting Structural variants in sequencing data
structural variants calling svs sequencing written 2.0 years ago by Glen20 • updated 19 months ago by Biostar ♦♦ 20
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 2.2 years ago by Macspider2.8k • updated 24 months ago by Biostar ♦♦ 20
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Variant Calling problem - find alternate heterozygous
vcf calling heterozygous variant written 2.6 years ago by Paul1.3k • updated 2.6 years ago by Zaag720
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INDEL and point mutation at same position in VCF
vcf indels calling snps alignment written 4.0 years ago by simono10120 • updated 2.8 years ago by Biostar ♦♦ 20
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Does anyone use Python for variant calling?
python ngs calling variant snp written 3.1 years ago by mhmtgenc8530 • updated 3.0 years ago by Zaag720
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SNP calling pipeline - testing different programs
snp calling mapping filtering written 4.1 years ago by Eric Normandeau10k • updated 3.3 years ago by alexisdereeper30
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Snp Calling With Bcftools Using Pileup File Format Instead Of Bcf
calling bcftools snp written 5.9 years ago by Justin440 • updated 4.4 years ago by Biostar ♦♦ 20
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Filtering Variant Calls Based On Genotype Quality
calling variant filtering written 6.7 years ago by Kssr110 • updated 4.5 years ago by Biostar ♦♦ 20
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8 follow
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Haplotype Calling
haplotype calling 454 sequencing written 6.8 years ago by Empyrean160 • updated 4.6 years ago by Biostar ♦♦ 20
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Tetraploid Snp Calling & Snp Filtering
quality calling samtools snp written 5.3 years ago by pavenhuizen70 • updated 5.3 years ago by Adrian Pelin2.3k
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How To Deal With Wild-Type Versus No-Calls In Exomes?
exome calling variant human written 5.4 years ago by Chris Cole680 • updated 5.4 years ago by Daniel Swan13k
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Realignertargetcreator --- Arrayindexoutofboundsexception
gatk next-gen calling variant written 6.9 years ago by sandeep.deverasetty60 • updated 5.5 years ago by Biostar ♦♦ 20
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How To Prepare Gatk .Vcf Files Output For Annovar ?
vcf gatk calling variant annovar written 5.9 years ago by newDNASeqer630 • updated 5.9 years ago by Malachi Griffith17k
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How To Interprete/Display .Vcf Data File?
vcf calling variant written 5.9 years ago by newDNASeqer630 • updated 5.9 years ago by alaincoletta140
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Paired-End Reads Alignment For Variant Calling ?
calling gatk paired-end picard variant written 5.9 years ago by newDNASeqer630 • updated 5.9 years ago by Ashutosh Pandey11k
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