Showing: callingreset
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How to detect False positive variant in repeat region ?
vcf calling bam written 8 months ago by istdasklar0 • updated 8 months ago by Kevin Blighe31k
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mpileup for PacBio reads
quiver calling pacbio mpileup variants written 19 months ago by Biomonika (Noolean)3.0k • updated 11 months ago by tjduncan190
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Detecting Structural variants in sequencing data
structural variants calling svs sequencing written 17 months ago by Glen20 • updated 12 months ago by Biostar ♦♦ 20
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VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 19 months ago by Macspider2.6k • updated 16 months ago by Biostar ♦♦ 20
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Variant Calling problem - find alternate heterozygous
vcf calling heterozygous variant written 24 months ago by Paul1.2k • updated 24 months ago by Zaag660
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INDEL and point mutation at same position in VCF
vcf indels calling snps alignment written 3.4 years ago by simono10120 • updated 2.2 years ago by Biostar ♦♦ 20
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Does anyone use Python for variant calling?
python ngs calling variant snp written 2.5 years ago by mhmtgenc8530 • updated 2.4 years ago by Zaag660
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SNP calling pipeline - testing different programs
snp calling mapping filtering written 3.5 years ago by Eric Normandeau9.9k • updated 2.7 years ago by alexisdereeper30
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Snp Calling With Bcftools Using Pileup File Format Instead Of Bcf
calling bcftools snp written 5.3 years ago by Justin440 • updated 3.8 years ago by Biostar ♦♦ 20
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Filtering Variant Calls Based On Genotype Quality
calling variant filtering written 6.1 years ago by Kssr110 • updated 3.9 years ago by Biostar ♦♦ 20
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Haplotype Calling
haplotype calling 454 sequencing written 6.2 years ago by Empyrean160 • updated 4.0 years ago by Biostar ♦♦ 20
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Tetraploid Snp Calling & Snp Filtering
quality calling samtools snp written 4.7 years ago by pavenhuizen70 • updated 4.7 years ago by Adrian Pelin2.2k
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How To Deal With Wild-Type Versus No-Calls In Exomes?
exome calling variant human written 4.8 years ago by Chris Cole680 • updated 4.8 years ago by Daniel Swan13k
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Realignertargetcreator --- Arrayindexoutofboundsexception
gatk next-gen calling variant written 6.3 years ago by sandeep.deverasetty60 • updated 4.9 years ago by Biostar ♦♦ 20
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How To Prepare Gatk .Vcf Files Output For Annovar ?
vcf gatk calling variant annovar written 5.3 years ago by newDNASeqer600 • updated 5.3 years ago by Malachi Griffith16k
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How To Interprete/Display .Vcf Data File?
vcf calling variant written 5.3 years ago by newDNASeqer600 • updated 5.3 years ago by alaincoletta90
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Paired-End Reads Alignment For Variant Calling ?
calling gatk paired-end picard variant written 5.3 years ago by newDNASeqer600 • updated 5.3 years ago by Ashutosh Pandey11k
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How To Call Cnvs From Raw Intensities
array illumina calling written 5.7 years ago by elengss0 • updated 5.7 years ago by Istvan Albert ♦♦ 78k
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