Showing selected topics • reset
<prev • 47 results • page 1 of 2 • next >
5
votes
1
answer
331
views
1
answer
0
votes
1
answer
1.4k
views
1
answer
GATK Panel Of Normals (PoN)
gatk beta calling variant written 16 months ago by Barry Digby310 • updated 10 months ago by esraesmeray199010
5
votes
2
answers
5.3k
views
2
answers
Problems When Calling Snps Using Samtools Mpileup
calling samtools snp written 7.2 years ago by 20 • updated 10 months ago by Biostar ♦♦ 20
3
votes
1
answer
2.2k
views
1
answer
Nanopore SNP and indels calling tool
snps indels tools calling nanopore written 19 months ago by tarek.mohamed260 • updated 15 months ago by WouterDeCoster43k
0
votes
0
answers
429
views
0
answers
2
votes
1
answer
1.0k
views
1
answer
How to detect False positive variant in repeat region ?
vcf calling bam written 2.0 years ago by istdasklar0 • updated 2.0 years ago by Kevin Blighe55k
3
votes
3
answers
7.2k
views
5 follow
3
answers
0
votes
1
answer
1.3k
views
1
answer
mpileup for PacBio reads
quiver calling pacbio mpileup variants written 2.9 years ago by Biomonika (Noolean)3.1k • updated 2.2 years ago by tjduncan250
3
votes
0
answers
1.7k
views
7 follow
0
answers
Detecting Structural variants in sequencing data
structural variants calling svs sequencing written 2.7 years ago by Glen20 • updated 2.3 years ago by Biostar ♦♦ 20
1
vote
1
answer
848
views
1
answer
VCF Indel line structure: what is actually reported?
indel vcf calling variant snp written 2.9 years ago by Macspider3.0k • updated 2.7 years ago by Biostar ♦♦ 20
0
votes
0
answers
769
views
0
answers
5
votes
1
answer
885
views
1
answer
5
votes
1
answer
940
views
1
answer
Variant Calling problem - find alternate heterozygous
vcf calling heterozygous variant written 3.3 years ago by Paul1.4k • updated 3.3 years ago by Zaag770
4
votes
0
answers
1.7k
views
0
answers
INDEL and point mutation at same position in VCF
vcf indels calling snps alignment written 4.7 years ago by simono10120 • updated 3.5 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.6k
views
1
answer
27
votes
6
answers
2.7k
views
6
answers
Does anyone use Python for variant calling?
python ngs calling variant snp written 3.7 years ago by mhmtgenc8540 • updated 3.7 years ago by Zaag770
9
votes
5
answers
3.7k
views
5
answers
SNP calling pipeline - testing different programs
snp calling mapping filtering written 4.8 years ago by Eric Normandeau10k • updated 3.9 years ago by alexisdereeper30
5
votes
1
answer
4.6k
views
1
answer
Snp Calling With Bcftools Using Pileup File Format Instead Of Bcf
calling bcftools snp written 6.6 years ago by Justin440 • updated 5.1 years ago by Biostar ♦♦ 20
4
votes
1
answer
5.5k
views
7 follow
1
answer
Filtering Variant Calls Based On Genotype Quality
calling variant filtering written 7.4 years ago by Kssr110 • updated 5.2 years ago by Biostar ♦♦ 20
7
votes
2
answers
5.9k
views
8 follow
2
answers
Haplotype Calling
haplotype calling 454 sequencing written 7.5 years ago by Empyrean160 • updated 5.3 years ago by Biostar ♦♦ 20
1
vote
2
answers
2.6k
views
2
answers
11
votes
1
answer
6.6k
views
10 follow
1
answer
Tetraploid Snp Calling & Snp Filtering
quality calling samtools snp written 6.0 years ago by pavenhuizen70 • updated 6.0 years ago by Adrian Pelin2.3k
2
votes
1
answer
1.6k
views
1
answer
How To Deal With Wild-Type Versus No-Calls In Exomes?
exome calling variant human written 6.1 years ago by Chris Cole740 • updated 6.1 years ago by Daniel Swan13k
3
votes
1
answer
2.6k
views
1
answer
0
votes
1
answer
2.2k
views
1
answer
Realignertargetcreator --- Arrayindexoutofboundsexception
gatk next-gen calling variant written 7.6 years ago by sandeep.deverasetty60 • updated 6.2 years ago by Biostar ♦♦ 20
4
votes
1
answer
4.2k
views
6 follow
1
answer
How To Prepare Gatk .Vcf Files Output For Annovar ?
vcf gatk calling variant annovar written 6.6 years ago by newDNASeqer670 • updated 6.6 years ago by Malachi Griffith18k
7
votes
2
answers
4.1k
views
7 follow
2
answers
13
votes
4
answers
8.5k
views
9 follow
4
answers
How To Interprete/Display .Vcf Data File?
vcf calling variant written 6.6 years ago by newDNASeqer670 • updated 6.6 years ago by alaincoletta160
1
vote
1
answer
9.1k
views
5 follow
1
answer
Paired-End Reads Alignment For Variant Calling ?
calling gatk paired-end picard variant written 6.6 years ago by newDNASeqer670 • updated 6.6 years ago by Ashutosh Pandey12k
6
votes
2
answers
3.3k
views
2
answers
<prev • 47 results • page 1 of 2 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1053 users visited in the last hour