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written 10 weeks ago by
ivan.radonov • 10
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10 weeks ago by
WouterDeCoster ♦ 35k
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Forum:
How hard it is to get a bioinformatics degree in one country but find a career in another country?
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dominic.dong • 10
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Devon Ryan ♦ 86k
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Forum:
Should I quit PhD program?
written 7 months ago by
George • 30
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jenn.drummond • 40
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written 6.8 years ago by
John • 1.4k
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jonathan.hedger • 0
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written 4.8 years ago by
K • 180
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12 months ago by
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written 12 months ago by
Hussain Ather • 890
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JC ♦ 7.0k
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written 7.3 years ago by
Jeroen Van Goey ♦ 2.2k
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Mobilunity • 0
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written 17 months ago by
bloodnaousky • 0
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17 months ago by
h.mon ♦ 21k
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written 7.9 years ago by
Mal • 50
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23 months ago by
ms160402218 • 0
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written 8.8 years ago by
Istvan Albert ♦♦ 78k
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2.1 years ago by
Mike • 1.1k
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written 2.3 years ago by
dublinski • 20
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2.3 years ago by
daniel.dvorkin • 180
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Forum:
Looking for career advice
written 2.5 years ago by
randalljellis • 70
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2.5 years ago by
Michael Dondrup ♦ 45k
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5
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written 2.6 years ago by
mvasquez16 • 20
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2.6 years ago by
chen • 1.7k
27
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1.9k
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3
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2
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688
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Forum:
Advice for undergrad?
written 2.7 years ago by
KatherineOB • 0
• updated
2.7 years ago by
Sinji • 2.7k
3
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853
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written 2.7 years ago by
Eamag • 10
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2.7 years ago by
Michael Dondrup ♦ 45k
16
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2
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written 2.8 years ago by
Sarahlwilliamson • 20
• updated
2.8 years ago by
Istvan Albert ♦♦ 78k
36
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1.4k
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2
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written 2.8 years ago by
graff1994 • 10
• updated
2.8 years ago by
Emily_Ensembl ♦ 16k
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0
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written 2.9 years ago by
michealsmith • 740
• updated
2.9 years ago by
Michael Dondrup ♦ 45k
78
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4.6k
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6
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1
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892
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written 3.2 years ago by
magnusinformatics • 0
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3.2 years ago by
cpad0112 • 10k
6
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1.8k
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2
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Recent Replies
-
C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Glubbdrubb • 0
That didn't reveal anything. I think the invisible character is lost when I extract the lines. Bu...
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C: Interpreting mapping contaminants by
h.mon ♦ 21k
Also, you could save stderr with `2>stderr.txt`. I never had problems with stdout / stderr and...
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C: How can I set up dates with format yyyy-M in beauti? by
armando.torre • 0
Thanks for your reply. I also tried changing the date format yyyy-M-dd to yyyy-MM-dd without any ...
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Bastien Hervé • 2.7k
Try this on a single sam result that failed and compare the two lines
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Glubbdrubb • 0
Yes, but keep in mind those are octal ascii codes, not decimal ascii codes. Removing only 160 (wh...
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Bastien Hervé • 2.7k
I think that with this command : tr -cd '\1-\176' < D8_Bird8_42-3p.sam > sample.sam Y...
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limo_Rachel • 0
have you solved the problem yet? I've been troubled by the same problem and looking forward to a ...
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Glubbdrubb • 0
What is the octal encoding for ASCII 160 in octal? Cause my tr command requires octal specificati...
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Bastien Hervé • 2.7k
If you can't see the non ascii characters by eye, it's propably the non-breaking line space as as...
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C: htseq-count SAM Processing error "can't decode byte 0xa7" by
Glubbdrubb • 0
The bam files were only worked on in Linux, using linux tools. I wrote a python script that pri...
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Damn "auto-correct/spell-check" ! But, how come they never noticed ?
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The Chi Square test seems a reasonable choice, given the data that you have accumulated. If you w...
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