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Recent Votes
- What'S The Difference Between Cds And Orf?
- A: What proportion of the (coding) genome is actually expressed at any given time?
- C: Message Error : Blastdbcmd
- A: What'S The Difference Between Cds And Orf?
- A: What Does Cds And Exon Mean In A Gtf File?
- A: What proportion of the (coding) genome is actually expressed at any given time?
- C: Sequence Duplication Levels and Clumpify
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Recent Replies
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C: Merge two vcf's, keep only intersection of REF/ALT alleles by
just learning • 0
Thank you for the reply! I was attempting to avoid using bcftools isec after the merge because it...
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C: Script: Downloading fastq files from ENA database by
ATpoint ♦ 44k
That'd explain things. I am on $ bash --version GNU bash, version 3.2.57(1)-release (x86...
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C: Script: Downloading fastq files from ENA database by
Pierre Lindenbaum ♦ 133k
what's your [version][1] of bash ? [1]: https://twitter.com/JulianMHess/status/13526775153541...
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C: Script: Getting information about SRX experiment ID from NCBI database by
ATpoint ♦ 44k
https://www.biostars.org/u/41677/ I suggest that instead of multiple posts with sparse content yo...
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C: Message Error : Blastdbcmd by
GenoMax ♦ 95k
https://www.biostars.org/u/81179/ : You will need to download and expand ALL `nr` files for this ...
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A: Understanding Variant Effect Predictor results by
caro-ca • 20
I am still trying to understand the results. S. cerevisiae has ~6000 genes and according to the s...
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A: Message Error : Blastdbcmd by
Pierre Lindenbaum ♦ 133k
nr.00.tar.gz is 'just' a [tar][1] archive containing the files. [expand it][2] before use ...
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A: What proportion of the (coding) genome is actually expressed at any given time? by
GenoMax ♦ 95k
> What is the "typical" (?) mapping rate I should expect if I were to > have the reads mapp...
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A: Merge two vcf's, keep only intersection of REF/ALT alleles by
Pierre Lindenbaum ♦ 133k
> How can I tweak it to keep only the intersection? process the output of `bcftools merge` wi...
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C: Sequence Duplication Levels and Clumpify by
GenoMax ♦ 95k
I had missed the 48.81% part at the top. It makes sense since you are looking at small viral geno...
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A: What proportion of the (coding) genome is actually expressed at any given time? by
Mensur Dlakic • 8.2k
It depends on the exact organism, genome size, tissue sample, developmental stage(s), day-night c...
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A: Pac bio assembler by
mustafa_aljadi • 10
I am trying to make an assembly by PAC bio reads of beaver. it's already done by canu but the r...
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