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<prev • 35 results • page 1 of 2 • next >
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How to create plots correlating mRNA expression with PAM50 and my bait protein's expression using cBioPortal database?
pam50 assay mrna expression cbioportal written 17 days ago by F. Golestan • 10
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Tutorial: retrieve full TCGA datasets from cBioportal with R
data_retrieval tutorial tcga R cbioportal rnaseq written 2.7 years ago by TriS • 3.8k • updated 7 weeks ago by raffael.azevedo • 20
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Need help with cBioPortal data
cbioportal written 7 weeks ago by iyad.alnahhas • 0 • updated 7 weeks ago by lakhujanivijay ♦ 4.2k
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DEG analysis of METABRIC data from cBIOPORTAL
R deg analysis cbioportal breast cancer written 3 months ago by rGun • 10
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Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
clinicaldata survival tcga gdc cbioportal written 4 months ago by Vasu • 340
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MAGI, cBioPortal, GATK, Genepattern, MuTect, Oncotater, MutSigCV
cbioportal tutorial magi mutect mutsigcv written 4 months ago by Shicheng Guo • 7.6k
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The difference betewwn mutations and CNAs in cBioPortal Select Genomic Profiles
gene mutation cnas cbioportal written 8 months ago by Ervin_J • 0
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can cbioportal have a study be *updated* (as oppsed to removed, then re-added with a modified study)
cbioportal written 11 months ago by esalinas • 0
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Comparing lists of samples: gene expression analysis in cBioportal
metabric tcga cbioportal rna-seq oncomine written 12 months ago by oliver.hickman • 0
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Understanding cBioPortal data
mrna cna cbioportal cnv data written 15 months ago by 9606 • 320
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mRNA expression values in cbioportal
mrnaexpression cbioportal written 15 months ago by zy516565 • 0
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cBioPortal genetic profile id and mutational data analysis
gistic cna tcga cbioportal mutation assessor written 16 months ago by Nitin Sharma • 30
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how to find a particular GEO dataset or cohort in cBioportal and TCGA
geo R gdac tcga cbioportal written 17 months ago by Nitin Sharma • 30
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what is difference between preliminary somatic mutations, somatic mutations and validated somatic mutations
tcga somatic mutations cbioportal written 17 months ago by Nitin Sharma • 30
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Per Cancer Bulk Download from CBioPortal
cbioportal cancer written 4.7 years ago by dirigible2012 • 310 • updated 19 months ago by Biostar ♦♦ 20
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How does cBioPortal normalize data
cancer genomics rna-seq cbioportal written 19 months ago by Wenhu_Cao • 50 • updated 19 months ago by Kevin Blighe ♦ 45k
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TCGA data set with both expression (rna seq/ microarray) and exome seq of same samples?
cgdsr tcga cbioportal written 2.9 years ago by cafelumiere12 • 70 • updated 20 months ago by Biostar ♦♦ 20
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cBioPortal Z-score: value difference between download and web Portal
mrna tcga cbioportal written 20 months ago by faswad • 0
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Interpretation of GISTIC putative copy number alterations for mutations with cBioPortal in a specific cancer dataset
gistic tcga cbioportal mutations sequencing written 21 months ago by svlachavas • 570 • updated 21 months ago by Kevin Blighe ♦ 45k
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Find mutation rates for a set of genes
tcga mutations cbioportal cancer written 2.1 years ago by frida.danielsson • 40 • updated 2.1 years ago by poisonAlien • 2.8k
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Where does the cBioPortal cancer gene list stem from?
cbioportal written 2.1 years ago by timeforcoffee • 10
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cBioPortal survival analysis help
tcga cbioportal written 3.0 years ago by doc.golly • 50 • updated 2.4 years ago by edco84 • 0
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Ovarian cancer gene list selection criteria on cbioportal
cbioportal written 2.6 years ago by jarod_v6 • 10
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genome version in cbioportal
assembly tcga cbioportal written 2.7 years ago by Arnaud Ceol • 840 • updated 2.7 years ago by Cyriac Kandoth ♦ 5.3k
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Anyone knows mutation pipeline for cbioportal?
next-gen mutation cbioportal written 2.7 years ago by fenghc • 20
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visualize noncoding mutations
genome cbioportal cancer written 2.9 years ago by Pappu • 1.9k
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the reference protein sequences used in cBioportal database
tcga cbioportal written 3.0 years ago by taylorzheng.zz • 0
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[cBioPortal] [GATK] [TCGA] Somatic variant calling error
gatk tcga rna-seq cbioportal written 3.3 years ago by umn_bist • 320
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how to treat the value of methylation array
beta value probe tcga cbioportal methylation array written 3.3 years ago by huitianli009 • 0
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cBioPortal 'Mutations' tab
tcga cbioportal written 3.3 years ago by umn_bist • 320
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