Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 36 results • page 1 of 2 • next >
2
votes
1
answer
185
views
1
answer
How to compare and visualize own data with other cBioportal based studies?
tcga cbioportal written 5 months ago by Thind amarinder • 90 • updated 5 months ago by genomax ♦ 91k
0
votes
1
answer
406
views
1
answer
How to create plots correlating mRNA expression with PAM50 and my bait protein's expression using cBioPortal database?
pam50 assay mrna expression cbioportal written 16 months ago by F. Golestan • 60
16
votes
1
answer
10.0k
views
1
answer
Tutorial: retrieve full TCGA datasets from cBioportal with R
data_retrieval tutorial tcga R cbioportal rnaseq written 4.0 years ago by TriS • 4.2k • updated 17 months ago by raffael.azevedo • 30
0
votes
0
answers
420
views
0
answers
Need help with cBioPortal data
cbioportal written 17 months ago by iyad.alnahhas • 0 • updated 17 months ago by lakhujanivijay ♦ 5.3k
1
vote
1
answer
1.1k
views
1
answer
DEG analysis of METABRIC data from cBIOPORTAL
R deg analysis cbioportal breast cancer written 19 months ago by rGun • 10
2
votes
0
answers
602
views
0
answers
Question about ClinicalData discrepancies b/w cbioportal data and GDC data?
clinicaldata survival tcga gdc cbioportal written 20 months ago by Vasu • 490
3
votes
1
answer
478
views
1
answer
MAGI, cBioPortal, GATK, Genepattern, MuTect, Oncotater, MutSigCV
cbioportal tutorial magi mutect mutsigcv written 20 months ago by Shicheng Guo • 8.4k
0
votes
0
answers
425
views
0
answers
The difference betewwn mutations and CNAs in cBioPortal Select Genomic Profiles
gene mutation cnas cbioportal written 23 months ago by Ervin_J • 0
0
votes
1
answer
500
views
1
answer
can cbioportal have a study be *updated* (as oppsed to removed, then re-added with a modified study)
cbioportal written 2.2 years ago by esalinas • 0
0
votes
0
answers
916
views
0
answers
Comparing lists of samples: gene expression analysis in cBioportal
metabric tcga cbioportal rna-seq oncomine written 2.3 years ago by oliver.hickman • 0
2
votes
1
answer
764
views
1
answer
Understanding cBioPortal data
mrna cna cbioportal cnv data written 2.5 years ago by 9606 • 320
0
votes
0
answers
3.0k
views
0
answers
mRNA expression values in cbioportal
mrnaexpression cbioportal written 2.6 years ago by zy516565 • 0
1
vote
0
answers
1.1k
views
0
answers
cBioPortal genetic profile id and mutational data analysis
gistic cna tcga cbioportal mutation assessor written 2.6 years ago by CuriusScientist • 50
0
votes
0
answers
1.4k
views
0
answers
how to find a particular GEO dataset or cohort in cBioportal and TCGA
geo R gdac tcga cbioportal written 2.7 years ago by CuriusScientist • 50
1
vote
0
answers
744
views
0
answers
what is difference between preliminary somatic mutations, somatic mutations and validated somatic mutations
tcga somatic mutations cbioportal written 2.7 years ago by CuriusScientist • 50
7
votes
1
answer
4.2k
views
1
answer
Per Cancer Bulk Download from CBioPortal
cbioportal cancer written 6.0 years ago by dirigible2012 • 320 • updated 2.9 years ago by Biostar ♦♦ 20
2
votes
0
answers
1.8k
views
0
answers
How does cBioPortal normalize data
cancer genomics rna-seq cbioportal written 2.9 years ago by Wenhu_Cao • 70 • updated 2.9 years ago by Kevin Blighe ♦ 66k
2
votes
3
answers
2.1k
views
3
answers
TCGA data set with both expression (rna seq/ microarray) and exome seq of same samples?
cgdsr tcga cbioportal written 4.2 years ago by cafelumiere12 • 70 • updated 2.9 years ago by Biostar ♦♦ 20
1
vote
0
answers
1.2k
views
0
answers
cBioPortal Z-score: value difference between download and web Portal
mrna tcga cbioportal written 3.0 years ago by faswad • 10
6
votes
1
answer
2.0k
views
1
answer
Interpretation of GISTIC putative copy number alterations for mutations with cBioPortal in a specific cancer dataset
gistic tcga cbioportal mutations sequencing written 3.0 years ago by svlachavas • 680 • updated 3.0 years ago by Kevin Blighe ♦ 66k
0
votes
1
answer
894
views
1
answer
Find mutation rates for a set of genes
tcga mutations cbioportal cancer written 3.3 years ago by frida.danielsson • 40 • updated 3.3 years ago by poisonAlien • 2.8k
1
vote
0
answers
979
views
0
answers
Where does the cBioPortal cancer gene list stem from?
cbioportal written 3.4 years ago by timeforcoffee • 10
0
votes
1
answer
3.5k
views
1
answer
cBioPortal survival analysis help
tcga cbioportal written 4.3 years ago by doc.golly • 50 • updated 3.7 years ago by edco84 • 0
1
vote
0
answers
1.1k
views
0
answers
Ovarian cancer gene list selection criteria on cbioportal
cbioportal written 3.9 years ago by jarod_v6 • 10
3
votes
1
answer
1.8k
views
1
answer
genome version in cbioportal
assembly tcga cbioportal written 3.9 years ago by Arnaud Ceol • 850 • updated 3.9 years ago by Cyriac Kandoth ♦ 5.5k
5
votes
1
answer
2.0k
views
1
answer
Anyone knows mutation pipeline for cbioportal?
next-gen mutation cbioportal written 4.0 years ago by fenghc • 20
0
votes
0
answers
1.2k
views
0
answers
visualize noncoding mutations
genome cbioportal cancer written 4.2 years ago by Pappu • 1.9k
0
votes
0
answers
1.2k
views
0
answers
the reference protein sequences used in cBioportal database
tcga cbioportal written 4.3 years ago by taylorzheng.zz • 0
0
votes
0
answers
1.7k
views
0
answers
[cBioPortal] [GATK] [TCGA] Somatic variant calling error
gatk tcga rna-seq cbioportal written 4.6 years ago by umn_bist • 380
1
vote
0
answers
1.7k
views
0
answers
how to treat the value of methylation array
beta value probe tcga cbioportal methylation array written 4.6 years ago by huitianli009 • 0
<prev • 36 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • United states, just now
  • Bergen, Norway, 5 minutes ago
  • India, 6 minutes ago
  • London, 7 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1215 users visited in the last hour