Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: cds • reset
or   Classic search
<prev • 95 results • page 1 of 4 • next >
0
votes
1
answer
62
views
1
answer
One to one ortholog detection by RBH blast (Reciprocal best hit)
genome cds ortholog rbh blast written 8 days ago by madapada • 0
1
vote
1
answer
1.1k
views
1
answer
determining length of fasta cds and protein sequences
software cds protein fasta written 3.5 years ago by vigneshprbh37 • 20 • updated 5 weeks ago by lieven.sterck • 2.1k
6
votes
1
answer
172
views
1
answer
CDS sequence from mRNA and protein sequence
fasta cds protein code mrna written 6 weeks ago by Macspider • 2.5k • updated 6 weeks ago by lieven.sterck • 2.1k
2
votes
0
answers
394
views
0
answers
How to recompute coding sequences from a psl format ?
genome alignment sequence gmap cds written 10 months ago by thomas.bawin • 10 • updated 12 weeks ago by Biostar ♦♦ 20
2
votes
0
answers
164
views
0
answers
CDS prediction for newly assembled transcripts
assembly transcriptome rna-seq cds written 12 weeks ago by I0110 • 100
2
votes
1
answer
208
views
1
answer
getting feature annotations for all NCBI Refseq sequences
ncbi annotation refseq cds written 3 months ago by bitpir • 80 • updated 3 months ago by genomax ♦ 54k
0
votes
0
answers
152
views
0
answers
best CDS prediction tool for online annotation submission
fasta annotation ghostkoala prodigal cds written 4 months ago by willnotburn • 40
0
votes
0
answers
321
views
0
answers
Reference annotation file contains only transcript and CDS information, how to analyze the different expression of genes?
cds exon rna-seq written 9 months ago by zoukai3412085 • 0
0
votes
0
answers
312
views
0
answers
get CDS cordinates for genes, excluding UTR
gene cds written 9 months ago by J.F.Jiang • 710
0
votes
1
answer
558
views
1
answer
Program that will extract all CDS from protein-coding genes in a genome fasta file (with gff file)
genome gene cds written 10 months ago by molly77 • 10 • updated 10 months ago by Kevin Blighe ♦ 26k
3
votes
2
answers
558
views
2
answers
CDS FASTA file as Reference sequence for Ion Torrent
fasta cds .bed next-gen reference written 10 months ago by serenabivona • 10
1
vote
0
answers
501
views
0
answers
how to construct CDS by using annotation file (coordinates) properly ???
cds 1-based coorinates 0-based bam file written 11 months ago by adeena_hassan • 40
4
votes
1
answer
446
views
1
answer
Ensembl API, command-line argument
ensembl api python bash cds written 11 months ago by oars • 150 • updated 11 months ago by Alex Reynolds ♦ 25k
0
votes
1
answer
1.7k
views
1
answer
How To Add Partial Cds Seqfeature In Biopython?
cds biopython python written 5.2 years ago by Leszek ♦ 3.9k • updated 11 months ago by Biostar ♦♦ 20
7
votes
2
answers
543
views
7 follow
2
answers
Locating longest gene, CDS in Ensembl GTF
gtf ensembl longest gene cds written 12 months ago by oars • 150
1
vote
1
answer
664
views
1
answer
get gene annotation for nucleotide sequence of the NCBI RefSeq database
gene ncbi annotation cds dna written 13 months ago by dabid • 0
2
votes
1
answer
530
views
1
answer
GTF file: CDS feature is exon 1, but has frame = 1 or 2
gtf cds exon written 14 months ago by Marvin • 110 • updated 14 months ago by Devon Ryan ♦ 82k
1
vote
2
answers
2.2k
views
2
answers
Retrieving CDS sequences NCBI
ncbi cds batch entrez fasta written 3.3 years ago by vigneshprbh37 • 20 • updated 14 months ago by Biostar ♦♦ 20
2
votes
1
answer
484
views
5 follow
1
answer
DNA sequences trimming methods
cds trimming sequence dna written 14 months ago by l.souza • 60
0
votes
1
answer
445
views
1
answer
Extract CDS from an extracted gene without bioperl
cds tool written 14 months ago by adeena_hassan • 40 • updated 14 months ago by Ben • 50
0
votes
0
answers
506
views
0
answers
How to map exon data to CDS from one reference species?
exome cds exon protein mapping written 16 months ago by balasink • 10 • updated 15 months ago by Biostar ♦♦ 20
7
votes
1
answer
838
views
1
answer
Convert fasta to bed (no gtf available)
genome ensembl bed cds fasta written 16 months ago by bioinfo8 • 90
7
votes
1
answer
703
views
1
answer
Convert cds .fa to bed
fasta ensembl bed cds ucsc written 16 months ago by bioinfo8 • 90
2
votes
1
answer
388
views
1
answer
genome features and sequence parsing
genome cds sequence parsing written 16 months ago by lessismore • 490 • updated 16 months ago by Macspider • 2.5k
2
votes
2
answers
576
views
5 follow
2
answers
How to identify the contigs for each predicted cds sequences?
genome augustus output contigs cds written 16 months ago by mirza • 70 • updated 16 months ago by jrj.healey ♦ 6.1k
3
votes
4
answers
3.0k
views
6 follow
4
answers
How To Get The Coding Sequences (Cds) Based On The Protein Aminoacid Sequence
cds written 5.2 years ago by harrymao20 • 0 • updated 17 months ago by seancho • 40
1
vote
0
answers
616
views
0
answers
One sequence with multiple CDS start and end annotation with BioMart Browser
ensembl biomart cdna cds written 20 months ago by david.a.mancilla • 0 • updated 20 months ago by WouterDeCoster ♦ 31k
2
votes
2
answers
698
views
2
answers
Retrieval of chromosomal coordinates of coding sequences (CDS)
genome gene cds written 20 months ago by shakeelbiochemist • 0
3
votes
1
answer
528
views
1
answer
Find gene on genome from cds
genome cds written 21 months ago by guillaume.rbt • 450
4
votes
0
answers
782
views
0
answers
Does having ORF shows the coding potential of a transcript that showed no hit against NCBI nr ?
gene orf alignment blast cds written 21 months ago by Farbod • 3.1k
<prev • 95 results • page 1 of 4 • next >
Recent Votes
Recent Locations • All »
  • Tokyo, 1 minute ago
  • EU, 4 minutes ago
  • Washington University in St. Louis, MO, 6 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 978 users visited in the last hour