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<prev • 126 results • page 1 of 5 • next >
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269
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ORFs finding tools
genome orf findorf getorf cds written 7 months ago by profnf11295 • 0 • updated 6 weeks ago by Biostar ♦♦ 20
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263
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Is there a way to do a batch extraction of DNA Coding Sequences from List of Protein Accessions (NCBI)?
ncbi nuccore protein eutils cds written 11 weeks ago by biobaker • 0
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1
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148
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1
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Mapping of CDS sequence of genes using minimap2
minimap2 fasta mapping cds written 4 months ago by harisanjanas • 0 • updated 4 months ago by lieven.sterck ♦ 9.4k
4
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3
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4.6k
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3
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Entrez direct E-utilities - "efetch" command to retrieve CDS with protein accessions does not work
entrez direct e-utilities cds efetch retrieve written 4.3 years ago by al-ash • 140
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1
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168
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1
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Multi-records genbank to CDS
cds biopython genbank written 4 months ago by hazirliver • 10
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1
answer
224
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1
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From consensus sequence with variants to protein
vcf cds aligment blast ccds written 5 months ago by Maxime • 0
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283
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6 follow
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Getting coding sequence length
ncbi gene cds written 6 months ago by A • 3.9k
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137
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find NBCI transcript with longest coding sequence for a list of human genes
ncbi cds transcript written 6 months ago by User6891 • 290
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5 follow
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How to extract CDS zones and list to an secondary text file. Perl
perl genome origin chromosome cds written 8 months ago by matache.razvan911 • 0 • updated 7 months ago by emi_14_ar • 0
112
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6
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148k
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47 follow
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What'S The Difference Between Cds And Orf?
cds orf written 8.6 years ago by shiy05 • 320 • updated 9 months ago by ciro.santilli • 20
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2
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267
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2
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Ensembl and Gene Prediction Tools output CDS' not divisible by 3
cds gff orf written 9 months ago by NickJD • 0 • updated 9 months ago by ATpoint ♦ 44k
5
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1
answer
613
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1
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Counting CDS's in Maker output
annotation gene prediction maker est cds written 10 months ago by mrmrwinter • 30 • updated 10 months ago by Juke34 • 4.9k
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2
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4.9k
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2
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Easy Way To Map Cds Coordinates To Genomic Coordinates
cds gff coordinates mapping bed written 9.8 years ago by Alper Yilmaz • 90 • updated 11 months ago by Shicheng Guo • 8.5k
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195
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How to get a sequence of Clone and do alignment?
gene cds clone written 12 months ago by isoBA • 0
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1
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354
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1
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How to identify all exons and cds in gene?
gene cds exon dna written 12 months ago by isoBA • 0 • updated 12 months ago by Pierre Lindenbaum ♦ 133k
2
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2
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298
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2
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Getting CDS from chromosome positions
cds sequence chromosome position genome browser written 14 months ago by drmouradap • 0 • updated 13 months ago by Luis Nassar • 420
3
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2
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283
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7 follow
2
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Obtaining nucleotide sequences from a set of protein identifiers
sequence cds elink etools entrez written 13 months ago by hopf • 10 • updated 13 months ago by Chirag Parsania • 1.9k
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384
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5 follow
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How to calculate GC% at 1st, 2nd and 3rd codon position for each sequence in a multifasta
assembly 3rd codon position gc% cds written 13 months ago by forni.giobbe • 0 • updated 13 months ago by Joe ♦ 18k
11
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2
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2.3k
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2
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should stop codon be counted as part of CDS
gtf cds stop codon written 4.4 years ago by -_- • 870 • updated 14 months ago by Juke34 • 4.9k
2
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1
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1.6k
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1
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GTF file: CDS feature is exon 1, but has frame = 1 or 2
gtf cds exon written 3.6 years ago by Marvin • 170 • updated 14 months ago by Biostar ♦♦ 20
1
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0
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269
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Download multiple bacterial CDS from NCBI using Biopython
ncbi cds biopython written 14 months ago by lisssanka • 0
2
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1
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391
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1
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generating 'maximal' cds sequence from multiple isoforms of a gene
gene cds gff written 15 months ago by mforthman • 40 • updated 15 months ago by Brice Sarver • 3.6k
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500
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Which file should I use to retrieve CDs following the GenBank Assembly link? No RefSeq available.
ncbi assembly refseq gbff cds written 15 months ago by andrespara • 10
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2
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1.0k
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2
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Extract every CDS sequences from a VCF file
vcf cds alignment written 16 months ago by maxime.policarpo • 140 • updated 16 months ago by Pierre Lindenbaum ♦ 133k
0
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1
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301
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1
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a CDS without gene_Id's can be annotated?
genome cds rna-seq written 17 months ago by m986 • 10 • updated 17 months ago by joe555 • 0
4
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2
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536
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2
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CDS file (as reference) can be used for align my fastq files?
cds alignment rna-seq written 17 months ago by m986 • 10 • updated 17 months ago by swbarnes2 ♦ 9.3k
4
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1
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504
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1
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Can Animal protein has different domain from the same protein in different translation frames?
cds translation protein orf frame written 19 months ago by javiersg • 0
3
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1
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348
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1
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Mapping aligned reads to UTRs
cds alignment utr rna-seq written 19 months ago by jpcchoy • 0 • updated 19 months ago by Ace • 80
2
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0
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456
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Bulk Download all CDS and UTRs of known genes from ENSEMBL
cds utr ensembl written 19 months ago by Aishwarya Kulkarni • 80 • updated 19 months ago by ATpoint ♦ 44k
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Amino acid sequence from CDS information of gff file
cds gff amino acid written 20 months ago by doubleA • 0
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