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Job: Postdoctoral researcher at Bioinformatics Unit, Turku Centre for Biotechnology, Finland
R sequence chip-seq job rna-seq written 20 hours ago by mirkka.ruotsalainen • 0
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Comparing open chromatin data to ChromHMM model
chromhmm chip-seq atac-seq written 1 day ago by rbronste • 110
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Difference in number of peaks called
macs2 chip-seq peakcalling written 1 day ago by anupriyaverma1408 • 100
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Calling peaks with macs2 if not all replicates have a corresponding input-file
replicates macs2 chip-seq written 9 weeks ago by jklopp • 0 • updated 3 days ago by Biostar ♦♦ 20
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Enrichment Analysis: BiNGO + DAVID
chip-seq written 2.9 years ago by federica.bda • 0 • updated 3 days ago by Biostar ♦♦ 20
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peak annotation chip-seq
software error peakanalyzer next-gen chip-seq written 4 days ago by ana222 • 0 • updated 4 days ago by Ram ♦ 11k
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139
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ValueError: invalid literal for int() with base 10: 'start' computeMatrix of deeptools
deeptools chip-seq written 5 days ago by salamandra • 60
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1
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Low-quality datasets for QC purposes?
chip-seq written 5 days ago by Bohdan Khomtchouk • 270 • updated 5 days ago by dyollluap • 180
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How to analyze processed data from ArrayExpress?
genome R next-gen chip-seq rna-seq written 7 weeks ago by Muhammad Haseeb • 50 • updated 5 days ago by Biostar ♦♦ 20
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Extracting Features That Appear In TSS Regions
chip-seq atac-seq written 6 days ago by armonazizi • 0 • updated 6 days ago by christacaggiano • 20
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News: A Personalized, Precise Approach to Fighting Cancer
cancer news chip-seq sequencing biotech rna-seq written 6 days ago by Pine Biotech • 20
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Visualize smooth ChIP peaks with Homer makeUCSCfile
homer chip-seq ucsc written 6 days ago by varsha619 • 0
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How does differences in library size infuences ChIP-Seq experiments?
chip-seq library normalisation written 6 days ago by Assa Yeroslaviz • 1.1k • updated 6 days ago by Istvan Albert ♦♦ 71k
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Erorr in peakannotator
software error annotation next-gen chip-seq written 7 days ago by Brice222 • 30
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Data size for ChIPseq and RNAseq data
chip-seq rna-seq written 8 days ago by adelest.ad • 0 • updated 8 days ago by Devon Ryan ♦ 68k
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Job: 3-year fully funded PhD position in bioinformatics/integromics at the University of Bergen, Norway
integromics next-gen chip-seq job rna-seq written 8 days ago by Gon • 50
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147
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Chip-seq peak annotation [Chipseeker]
peak chip-seq chipseeker annotation written 14 days ago by anupriyaverma1408 • 100 • updated 9 days ago by Guangchuang Yu • 1.5k
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124
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Twobittofa download and install link?
chip-seq written 9 days ago by Azhar • 20
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Job: Core Bioinformatician (Research Associate) x2 : Cambridge, United Kingdom
next-gen chip-seq atac-seq rna-seq job written 22 days ago by alexsossick • 10 • updated 9 days ago by Bioinformatics_NewComer • 170
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MACS2 bdgpeakcall gives UnboundLocalError: local variable 'peak_content' referenced before assignment:
macs2 chip-seq written 9 days ago by salamandra • 60
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Merge bed files, keep the peak count
bedtools bedops chip-seq written 12 months ago by rioualen • 170 • updated 11 days ago by Biostar ♦♦ 20
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I have a problem when I am using the bedGraphToBigWig.
chip-seq written 11 days ago by ghostforever.shi • 10
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How to deal with low-depth ChIP-seq / ATAC-seq samples
normalization chip-seq atac-seq low depth written 13 days ago by Vanilla • 30
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5 follow
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Bowtie2 and Bowtie2-align error
chip-seq written 14 days ago by Azhar • 20
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Tool: Transcription Factor Binding Sites, Motifs and Profiles from ~10200 ChIP-seq and TCGA datasets
transcription factor lncrna chip-seq tool mirna written 8 months ago by lsp03yjh • 450
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get intervals of a fraction of bed-files
chip-seq written 14 days ago by markus.glass • 0 • updated 14 days ago by Alex Reynolds ♦ 19k
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meaning of XM:i:N in Bowtie output
chip-seq written 14 days ago by Don • 10 • updated 14 days ago by Sej Modha • 1.3k
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Differential chip-seq peak calling using macs2
chip-seq written 14 days ago by lucas.michel • 0 • updated 14 days ago by Ian ♦ 4.9k
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Using Zagros & understanding its results
software error clip-seq next-gen chip-seq written 9 months ago by anupriyaverma1408 • 100 • updated 15 days ago by Biostar ♦♦ 20
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Separating adapter sequences
chip-seq sequencing written 15 days ago by a.rex • 60
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