Showing: chip-seqreset
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Small dataset for data analysis in the own laptop
chip-seq rna-seq written 2 days ago by iibrams070 • updated 1 day ago by Istvan Albert ♦♦ 79k
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Homer not finding any genomes?
homer chip-seq hic written 3 days ago by rf100
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bamCompare the result if 0
deeptools chip-seq bamcompare written 3 days ago by HI0 • updated 3 days ago by Devon Ryan88k
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Bowtie 2 error?
bowtie2 chip-seq aligne written 7 days ago by star130
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the peaks of ChIPseq are few
next-gen chip-seq call peak written 9 days ago by Francis10 • updated 8 days ago by Friederike3.2k
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GC content from bam to fasta file
chip-seq written 12 days ago by GK161060
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284
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92
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No called peaks from macse 2 and the alignment rate 90%
macs2 chip-seq written 14 days ago by sahhomaha0 • updated 14 days ago by h.mon24k
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Aligment rate vs called peaks
chip-seq written 14 days ago by sahhomaha0 • updated 14 days ago by h.mon24k
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how to retrieve binding affinity matrix in diffbind
diffbind dba.count chip-seq written 22 days ago by hamaor0 • updated 15 days ago by iamjli10
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CLIP-seq peak analysis
clip-seq peak calling chip-seq written 19 days ago by mb3140 • updated 18 days ago by shawn.w.foley260
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Calculate ChIP-seq correlation in promoter regions
chip-seq sequencing written 20 days ago by dcheng10 • updated 20 days ago by Devon Ryan88k
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How to compare different chipseq peak calling methods?
chip-seq written 20 days ago by jesvinjoy350 • updated 20 days ago by jared.andrews071.8k
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Upsampling BAMs, or downsampling
chip-seq written 21 days ago by HI0
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Peak caller for broad peaks, replicates and paired-end reads
chip-seq written 2.9 years ago by Ric190 • updated 22 days ago by msimmer92150
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Union Peaks For Peaks Called On Different Strains
chip-seq written 6.8 years ago by Sander Timmer700 • updated 23 days ago by Biostar ♦♦ 20
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