Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 2,516 results • page 1 of 84 • next >
2
votes
1
answer
43
views
1
answer
NarrowPeak format -Peak field
bed chip-seq dnase-seq written 1 day ago by kimkes25 • 0 • updated 1 day ago by ATpoint ♦ 39k
0
votes
0
answers
43
views
0
answers
how can i evaluate the different between two samples of distribution of peaks in the genome of chip-seq
chip-seq written 2 days ago by zhao03 • 30
0
votes
0
answers
43
views
0
answers
Flip the heatmaps of ChIP-seq data to match TSS of +/- strand in deeptools
chip-seq written 2 days ago by Sho • 0
0
votes
0
answers
39
views
0
answers
Plot a dotted line to the start of the regions in computeMatrix, deepTools
chip-seq tool written 2 days ago by Sho • 0
1
vote
1
answer
49
views
1
answer
Chip-Seq Peak Annotation
chip-seq written 2 days ago by NAIKANKIT1994 • 0 • updated 2 days ago by jared.andrews07 ♦ 7.3k
1
vote
1
answer
53
views
1
answer
ChIPQC error when running example from documentation
R chip-seq chipqc written 3 days ago by DBScan • 20 • updated 3 days ago by jared.andrews07 ♦ 7.3k
3
votes
0
answers
65
views
0
answers
What is the best peakcaller for H3 antibody?
chip-seq written 3 days ago by grx0326 • 0 • updated 3 days ago by hyperghjhon • 0
0
votes
1
answer
67
views
1
answer
Failed to convert bamToBed, pair-end
chip-seq written 4 days ago by MJ • 0 • updated 4 days ago by swbarnes2 ♦ 8.7k
0
votes
1
answer
61
views
1
answer
sparse peak calling
chip-seq written 4 days ago by kanwarjag • 1.1k • updated 4 days ago by AS • 0
1
vote
2
answers
112
views
7 follow
2
answers
Does anyone know/would be willing to give me a guide on how to do ChIP-Seq data analysis?
next-gen chip-seq written 5 days ago by orchard4 • 10
0
votes
0
answers
111
views
0
answers
findOverlapofPeaks discrepancy in peaklist vs Venn diagram
R chip-seq written 10 weeks ago by sayantani.ghoshdastidar • 0 • updated 5 days ago by Biostar ♦♦ 20
0
votes
0
answers
71
views
0
answers
HOMER: ./findMotifsGenome.pl
homer chip-seq written 5 days ago by radicav06 • 0
0
votes
0
answers
60
views
0
answers
Visualizing a bigwig ChIP-seq file over a region determined by a bed ChIP-seq file
bed sequencing correlation chip-seq bigwig written 6 days ago by topalsalih • 0
0
votes
2
answers
71
views
2
answers
how to define cis regulatory elements using histone modifications ChIPseq
chip-seq written 8 days ago by hubenxia123 • 0
3
votes
1
answer
74
views
1
answer
Alternative/Incorrect DiffBind outputs for each contrast when providing entire vs. partial datasheet
software error diffbind chip-seq written 7 days ago by gkunz • 10 • updated 7 days ago by jared.andrews07 ♦ 7.3k
0
votes
0
answers
55
views
0
answers
News: Online training - NGS analysis for gene regulation and epigenomics
next-gen epigenomics genome news chip-seq R written 7 days ago by carlopecoraro2 • 1.8k
1
vote
1
answer
11k
views
1
answer
Error: Encountered internal Bowtie 2 exception (#1) (ERR): bowtie2-align exited with value 1
chip-seq written 3.3 years ago by salamandra • 330 • updated 9 days ago by taufiqbge • 0
2
votes
0
answers
108
views
0
answers
Deeptools correlation plot: between RNAseq and H3K27ac ChIPseq
deeptools h3k27ac chip-seq rna-seq correlation written 9 days ago by aditi225 • 0 • updated 9 days ago by genomax ♦ 90k
2
votes
1
answer
99
views
1
answer
Aligned read loss after SAM to BAM conversion?
samtools alignment chip-seq written 9 days ago by saddamhusain77 • 0 • updated 9 days ago by swbarnes2 ♦ 8.7k
3
votes
4
answers
3.1k
views
6 follow
4
answers
Blacklisted regions for mm10
blacklisted regions chip-seq written 3.4 years ago by rbronste • 360 • updated 11 days ago by ATpoint ♦ 39k
1
vote
0
answers
100
views
0
answers
Chia-pipe cannot find the module pigz
chia-pet next-gen chip-seq written 12 days ago by bioinfo89 • 40 • updated 12 days ago by RamRS ♦ 30k
0
votes
0
answers
161
views
0
answers
Merging multiple fastq files and having IndexError when calling peaks using SICER
ngs chip-seq written 5 weeks ago by dcheng1 • 0 • updated 14 days ago by Biostar ♦♦ 20
5
votes
1
answer
120
views
1
answer
how matrix composition influences the final results in diff bind
diffbind chip-seq written 22 days ago by francesca3 • 30 • updated 22 days ago by Rory Stark • 790
2
votes
1
answer
174
views
1
answer
How can I obtain genome-wide coordinates for the motif of a particular transcription factor?
chip-seq written 22 days ago by Spencer • 20
2
votes
2
answers
123
views
2
answers
Saving results from GREAT
chip-seq great written 24 days ago by kanwarjag • 1.1k • updated 22 days ago by jared.andrews07 ♦ 7.3k
0
votes
0
answers
94
views
0
answers
Append/Merge/Combining multiple VCF files
sequence next-gen chip-seq rna-seq sequencing written 22 days ago by akshaykum684 • 0
1
vote
1
answer
2.0k
views
1
answer
How to filter chip-seq results?
next-gen chip-seq written 6.3 years ago by jfrigola1 • 0 • updated 24 days ago by Biostar ♦♦ 20
1
vote
1
answer
187
views
1
answer
Align chip seq data to specific sequences not in reference genome
alignment chip-seq written 9 weeks ago by j.matt.franklin • 0 • updated 25 days ago by Biostar ♦♦ 20
0
votes
0
answers
168
views
0
answers
help with segmentation fault deeptools
software error deeptools chip-seq written 28 days ago by campbell.1933 • 0
0
votes
0
answers
127
views
0
answers
Forum: Welcome to join our Wechat group for Bioinformatics!
genome forum chip-seq algorithm rna-seq single-cell written 27 days ago by Min Dai • 160
<prev • 2,516 results • page 1 of 84 • next >
Recent Votes
Recent Locations • All »
  • USA, 1 minute ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1005 users visited in the last hour