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<prev • 26 results • page 1 of 1 • next >
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Read counts from DCC or CIRI2 for differential expression with DESeq2?
differential expression rna-seq dcc circ2 circrna written 6 weeks ago by microbiotaiota • 20
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Tools to extract circRNA data from rRNA-depleted RNA-seq?
circrna rna-seq written 4 months ago by MatthewP • 780
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129
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1
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Is FPM the only normalisation method recommended for CircRNAs?
circrna rna-seq normalisation written 5 months ago by mimA • 30 • updated 5 months ago by Kevin Blighe ♦ 66k
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144
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How to get RNA data from whole genome sequencing data
circrna whole genome sequencing mirna written 5 months ago by rick42 • 0
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194
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circRNA - miRNA ceRNA network construction
cerna cscd circinteractome circrna mirna written 6 months ago by Barry Digby • 500
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284
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Perform differential circular RNA expression
circexplorer2 circrna written 7 months ago by wangdp123 • 250
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Arraystar Human CircRNA microarray V2 annotation
agilent annotation arraystar microarray circrna written 12 months ago by Barry Digby • 500 • updated 12 months ago by Kevin Blighe ♦ 66k
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1
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lncRNA and circular RNA identification softwares
rnaseq software circrna lncrna written 13 months ago by Rituriya • 30
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CIRCexplorer2: Exon count
rnaseq count circrna diffexp written 2.6 years ago by k.mamoud • 10 • updated 18 months ago by nedoluzhko • 0
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2
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What's the meaning of the strand+ or strand-?
circrna rna-seq written 23 months ago by fffuuue • 0 • updated 23 months ago by Erin_Ensembl • 410
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CIRCexplorer2 only looks for exonic circRNA
circexplorer circrna circular rna-seq written 2.0 years ago by t.blasco95 • 30 • updated 2.0 years ago by IP • 700
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circRNA-Seq analysis tools
circrna-seq circrna written 2.2 years ago by Ömer An • 200 • updated 2.1 years ago by IP • 700
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5 follow
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Someone has experience with KNIFE software for circRNA detection?
knife circrna rna-seq written 3.5 years ago by najibveto • 40 • updated 2.2 years ago by jianxiangshi • 0
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Understanding sailfish-cir results
circrna sailfish-cir rna-seq written 2.3 years ago by csijst • 20
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MapSplice2 circRNA output
mapsplice circrna rna-seq sequencing written 2.4 years ago by Grouse • 10
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MapSplice2 manual unavailable
mapsplice2 alignment circrna rna-seq sequencing written 2.3 years ago by Grouse • 10
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5 follow
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Tool: CircTools: Softwares for Discovering circRNA-microRNA Interactions from CLIP-Seq Datasets
circrna microrna interactome rna-seq clip-seq tool written 2.5 years ago by lsp03yjh • 800
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How can I classify circRNA as exonic, intronic or intergenic from the output of find_circ
circrna rna-seq written 2.5 years ago by tofazzal.stat • 0 • updated 2.5 years ago by Kevin Blighe ♦ 66k
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Well characterized circular RNA structure
rna structure circrna rna folding written 3.6 years ago by ccag • 30
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Does TCGA cancer institute have circRNA NGS sequencing data?
tcga circrna cancer written 3.7 years ago by Calvin • 60
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How does CIRCexplorer2 work with paired-end data?
tophat circrna rna-seq written 3.9 years ago by IP • 700 • updated 3.8 years ago by kepbod • 90
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1
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circRNA- seq normalization
normalization circrna rna-seq written 4.1 years ago by IP • 700 • updated 4.1 years ago by Kanne • 440
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Tool: deepBase: Identification, Expression, Evolution and Function of lncRNAs, circRNAs, sRNAs from deep-sequencing data
expression circrna rna-seq mirna tool lncrna written 4.9 years ago by lsp03yjh • 800
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Tool: StarScan: scanning small RNA targets in lncRNA, circRNA, mRNA and pseudo genes from degradome sequencing data
circrna degradome sequencing rna-seq mirna tool lncrna written 5.4 years ago by lsp03yjh • 800
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Performance of circRNA detection tools
circrna rna-seq written 5.2 years ago by Graslevy • 240 • updated 5.1 years ago by Biostar ♦♦ 20
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Difference between ciRNA and ICF's?
circrna written 5.4 years ago by neha 114 • 0 • updated 5.3 years ago by Jean-Karim Heriche ♦ 23k
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