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News: Variant Analysis, Bioinformatics Prerequisites, & Genome Browser workshops at UC Davis

class news training workshop written 15 months ago by nikhil.ashok.joshi • 10

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Parsing FASTA file using class in Python

fasta python class biopython parsing written 2.6 years ago by mrth • 30 • updated 2.6 years ago by Matt Shirley ♦ 9.1k

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Tutorial: Scripting for Biology - Online Virtual Classroom-based Module

perl python class tutorial go written 4.1 years ago by ugly.betty77 • 1.0k

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Recent Replies

C: PCA plot interpretation from scRNA data set by shoujun.gu • 230
1. How do you get the DEG list? If you compared by clusters (either cluster contains both ctrl an...
C: Database Recommendations for 16S-seq of the V4 Region by Carambakaracho • 1.8k
I might be missing the essential information on my mobile phone screen, but I to me the [Genome T...
C: QUAL scores in ipyrad vcf file output by Giovanni.madrigal12 • 100
Not an answer towards your question, but you can ask for help directly from the developers [here]...
C: Bioinformatician, a jack of all trades, but in the eye of the CV-beholder a mast by Carambakaracho • 1.8k
I do believe the accomplishments section is the most important part in the CV, too. This is the s...
C: Question any limit number of posts to download from API? by toshuta • 0
Biostars API. I don't get output. Maybe, there is limit to download posts? #title & comm...
A: Differential Peak Analysis from ENCODE Pipeline normalized outputs by ATpoint ♦ 24k
> The ENCODE pipeline corrects this problem by correcting to controls I do not know the ENCOD...
C: PCA plot interpretation from scRNA data set by cook.675 • 10
With regard to point 2, this is not the case when we look at a list of DEG by cluster. We see a w...
C: Question any limit number of posts to download from API? by ATpoint ♦ 24k
Post lacks any details what you are talking about. Please add details: Which API, which posts, ar...
C: Does Harmony batch correction for scRNA-seq require the same populations to be p by shoujun.gu • 230
looks like it requires same population.
C: haplotype phasing realted issues by kas • 0
thank you for your response. I'm using beagle output (.phased files) as input for selscan
C: PCA plot interpretation from scRNA data set by shoujun.gu • 230
To me, it looks like 1) each of your samples has two different cell identities; 2) treatment does...
A: Bioinformatician, a jack of all trades, but in the eye of the CV-beholder a mast by JC ♦ 8.7k
I am repeating what it was said before, you need to adjust your CV depending on the position you ...

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