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<prev • 130 results • page 1 of 5 • next >
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CNVKit for unmatched tumor-only WGS samples
cnvkit written 9 days ago by vctrm67 • 20
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1
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105
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1
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CNVkit bwa-mem parameters
cnvkit bwa-mem written 24 days ago by atariw • 0 • updated 17 days ago by Eric T. • 2.6k
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109
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CNVkit - confusion with batch command results
cnvkit written 4 weeks ago by sumudu_rangika • 30
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202
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Interpretting cnvkit p-value results
cnvkit cnv written 3 months ago by tjbencomo • 10 • updated 4 weeks ago by Biostar ♦♦ 20
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2
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130
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cnvkit Rscript error
cnvkit written 5 weeks ago by ruhirai • 0
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127
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How do I get a vcf file containing germline information paired with tumor and normal
cnvkit cnv written 5 weeks ago by 244349324 • 0 • updated 5 weeks ago by Pierre Lindenbaum ♦ 133k
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113
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CNVkit intervarls questions
cnvkit written 7 weeks ago by emmanouil.a • 30
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2
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257
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purecn with cnvkit
cnvkit purecn written 9 weeks ago by ww22runner • 0 • updated 9 weeks ago by markus.riester • 510
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191
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CNVkit 0.9.7: problems with incorrectly filtered bins, batch command outputs
cnvkit targeted amplicon panel cnv written 3 months ago by erikt • 0
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180
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CNVkit germline CNV calling error.
exome cnvkit germline written 3 months ago by amandine.septier • 0
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143
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Number of normal samples necessary for creating the reference in case of WGS
cnvkit written 4 months ago by samhitapn.96 • 0
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568
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How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr cnv wgs written 9 months ago by Jordan • 1.2k • updated 4 months ago by Kevin Blighe ♦ 69k
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158
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cnvkit-Combine consecutive bins with the same targeted gene name
wgs copy number calling snp cnvkit written 6 months ago by parvathi.sudha • 20 • updated 4 months ago by Biostar ♦♦ 20
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126
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Running cnvkit with nanopore long read ?
cnvkit longread written 4 months ago by yeeokkang • 0
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212
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Getting huge size of CNV region from CNV-kit with hybrid data.
cnvkit wes cnv written 5 months ago by Makplus T • 70
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504
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cnvkit filtering low depth bins
exome cnvkit exome capture written 19 months ago by pzratnog89 • 10 • updated 5 months ago by linouhao • 0
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194
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CNVkit cnv_ztest with low log2 values
cnvkit germline cnv_ztest exome sequencing written 6 months ago by merella.stefania • 10 • updated 6 months ago by GenoMax ♦ 94k
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279
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CNVkit with tumor only bam and flat reference
cnvkit tumor cnv written 6 months ago by youki • 0 • updated 6 months ago by GenoMax ♦ 94k
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Format of VCF for CNVkit call fonction and results
vcf cnvkit format cnv written 4.1 years ago by Hällyss • 50 • updated 6 months ago by Biostar ♦♦ 20
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177
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how to set the number of segments?
cnvkit written 7 months ago by leovam173 • 0
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200
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CNV calling on WGS only on gene positions
cnvkit cnvcalling cnvs written 8 months ago by pabloatienzalo • 0 • updated 8 months ago by _r_am ♦ 32k
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6 follow
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CNVKit noisy scatter plot
cnvkit copy number profile cnv on wes data cnv written 8 months ago by tanbiswas6 • 0 • updated 8 months ago by Eugene A • 90
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Tool: CNVkit, robust genome-wide copy number detection from DNA sequencing
sv python tool cnv cnvkit written 5.6 years ago by Eric T. • 2.6k • updated 8 months ago by tanbiswas6 • 0
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360
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Help with the CNVkit analysis
cnvkit written 9 months ago by kaurravneet4123 • 20
2
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1
answer
349
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1
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How do you know the best segments in cnvkit after filtering?
cnvkit cnv wgs written 9 months ago by Jordan • 1.2k • updated 9 months ago by brunobsouzaa • 490
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1
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332
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1
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The center in scatter plot generated by CNVkit looks off
scatter-plot cnvkit wgs written 9 months ago by Jordan • 1.2k • updated 9 months ago by d-cameron • 2.3k
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7 follow
1
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ImportError: cannot import name zip_longest
cnvkit written 14 months ago by russell.stewart.j • 10 • updated 9 months ago by moldach • 130
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208
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Analysis using CNVkit tool
cnvkit written 9 months ago by kaurravneet4123 • 20
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288
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0
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How to understand CNVkit output (.cnr, .cns)
cnvkit written 9 months ago by 2yuna710 • 10 • updated 9 months ago by lakhujanivijay ♦ 5.3k
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211
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1
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how to get a male reference when using cnvkit.py batch command
gene cnvkit written 9 months ago by guofengwang123 • 0 • updated 9 months ago by officialoxybreath • 0
<prev • 130 results • page 1 of 5 • next >
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