Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: cnvkit • reset
or   Classic search
<prev • 39 results • page 1 of 2 • next >
0
votes
1
answer
131
views
1
answer
How to get the range of LOH?
cnvkit written 4 days ago by Tonny • 10 • updated 1 day ago by Eric T. • 1.8k
0
votes
1
answer
193
views
1
answer
Understanding Weight column in .cns files in cnvkit
cnvkit weight call written 13 days ago by ingrid.schulman • 0 • updated 12 days ago by Eric T. • 1.8k
1
vote
1
answer
129
views
1
answer
Problems using cnvkit for ctDNA targeted sequencing
cnvkit ctdna results written 18 days ago by ingrid.schulman • 0 • updated 16 days ago by Eric T. • 1.8k
0
votes
1
answer
175
views
1
answer
Recurrent Segmentation Errors
cnvkit written 12 weeks ago by AndyW • 0 • updated 5 weeks ago by Eric T. • 1.8k
1
vote
2
answers
172
views
2
answers
"Shifted" copy number ratios coming from cnvkit?
cnvkit somatic copy number written 9 weeks ago by gil.hornung • 30 • updated 5 weeks ago by Eric T. • 1.8k
1
vote
1
answer
136
views
1
answer
Question about run cnvkit on DNAnexus
cnvkit snp dnanexus written 10 weeks ago by qyang • 20 • updated 5 weeks ago by Eric T. • 1.8k
3
votes
2
answers
163
views
5 follow
2
answers
CNV detection of single cell genome sequencing
cnvkit single cell genome sequencing cnv written 5 weeks ago by Tonny • 10 • updated 5 weeks ago by Eric T. • 1.8k
2
votes
1
answer
246
views
1
answer
Using cnvkit for targeted amplicon sequencing
cnvkit targeted amplicon sequencing reference cnv written 9 weeks ago by ingrid.schulman • 0 • updated 7 weeks ago by Eric T. • 1.8k
0
votes
0
answers
151
views
0
answers
CNVkit - creating a reference panel from 'normal' parts of tumour bams
cnvkit sequencing cnv tumour written 7 weeks ago by ferenju • 0
0
votes
1
answer
227
views
1
answer
Using THETA2 from CNVkit: what king of vcf do you need?
cnvkit tumor purity theta2 written 3 months ago by gil.hornung • 30 • updated 3 months ago by Eric T. • 1.8k
0
votes
1
answer
191
views
1
answer
CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 3 months ago by nina.naitatmane • 10 • updated 3 months ago by Eric T. • 1.8k
2
votes
1
answer
534
views
1
answer
How to add a legend to the heatmap?
cnvkit written 6 months ago by gil.hornung • 30
2
votes
1
answer
263
views
1
answer
Explications about call function of CNVkit
cnvkit call written 5 months ago by alice.choury • 50 • updated 5 months ago by Eric T. • 1.8k
1
vote
1
answer
281
views
1
answer
Error 1: NULL byte detected when trying to segment by PSCBS
exome cnvkit copy number segment written 5 months ago by nbay13 • 0 • updated 5 months ago by Eric T. • 1.8k
3
votes
1
answer
292
views
1
answer
CNVkit Segments vs Bins
exome cnvkit copy number segment written 5 months ago by Lauren • 10 • updated 5 months ago by Eric T. • 1.8k
6
votes
1
answer
315
views
1
answer
How is the "weight" calculated by CNVkit ?
cnvkit weight cnv written 5 months ago by alice.choury • 50 • updated 5 months ago by Eric T. • 1.8k
0
votes
1
answer
285
views
1
answer
How to export CNVkit results into PyClone?
cnvkit pyclone written 6 months ago by Jokhe • 40 • updated 6 months ago by Eric T. • 1.8k
3
votes
2
answers
276
views
2
answers
No call for exomes analysis
exome cnvkit written 6 months ago by alice.choury • 50 • updated 6 months ago by Eric T. • 1.8k
1
vote
1
answer
382
views
1
answer
Understanding coverage command
cnvkit written 6 months ago by deber1980 • 0 • updated 6 months ago by Eric T. • 1.8k
2
votes
1
answer
402
views
1
answer
Draw centromere on chromosome scatter plot
cnvkit plot cnv somatic written 7 months ago by alice.choury • 50 • updated 7 months ago by Eric T. • 1.8k
0
votes
1
answer
330
views
1
answer
CNVkit and Ion Torrent Data - Targeted Sequencing
ion torrent cnvkit cnv written 7 months ago by quantrum75 • 0 • updated 7 months ago by Eric T. • 1.8k
1
vote
2
answers
421
views
2
answers
cnvkit output understanding
cnvkit cnv written 7 months ago by runnerbio88 • 50
0
votes
2
answers
403
views
2
answers
Format of VCF for CNVkit call fonction and results
vcf cnvkit format cnv written 8 months ago by alice.choury • 50
1
vote
1
answer
316
views
1
answer
can I use CNVkit for calculating copy number differences in different human population sample data for selected regions?
cnvkit cnv written 8 months ago by jainythomas1 • 10 • updated 8 months ago by Eric T. • 1.8k
3
votes
2
answers
607
views
2
answers
CNVkit : small CNV calling
cnvkit single-exon cnv written 9 months ago by alice.choury • 50 • updated 8 months ago by Eric T. • 1.8k
1
vote
1
answer
372
views
1
answer
Questions about creating my_antitargets.bed
cnvkit antitarget cnv capture written 10 months ago by alice.choury • 50 • updated 9 months ago by Eric T. • 1.8k
0
votes
2
answers
545
views
2
answers
Help on understanding CNVkit CN1/CN2
cnvkit written 10 months ago by phusion • 0
0
votes
3
answers
548
views
3
answers
CNVkit assuming male for female samples
cnvkit written 11 months ago by bracha.avigdor • 0
0
votes
2
answers
644
views
2
answers
cnvkit example data
cnvkit bam cnv written 15 months ago by laxvid • 10 • updated 12 months ago by Akliao • 0
2
votes
1
answer
547
views
1
answer
CNVkit: CSV error when testing installation
cnvkit written 13 months ago by opm • 0 • updated 13 months ago by Eric T. • 1.8k
<prev • 39 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • Cardiff, UK, 1 minute ago
  • Asgard, 1 minute ago
  • United Kingdom, 2 minutes ago
  • EMBL-EBI, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1130 users visited in the last hour