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<prev • 123 results • page 1 of 5 • next >
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Interpretting cnvkit p-value results
cnvkit cnv written 21 days ago by tjbencomo • 10
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85
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CNVkit 0.9.7: problems with incorrectly filtered bins, batch command outputs
cnvkit targeted amplicon panel cnv written 23 days ago by erikt • 0
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98
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CNVkit germline CNV calling error.
exome cnvkit germline written 25 days ago by amandine.septier • 0
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92
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Number of normal samples necessary for creating the reference in case of WGS
cnvkit written 6 weeks ago by samhitapn.96 • 0
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1
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419
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1
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How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr cnv wgs written 7 months ago by Jordan • 1.2k • updated 6 weeks ago by Kevin Blighe ♦ 66k
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125
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cnvkit-Combine consecutive bins with the same targeted gene name
wgs copy number calling snp cnvkit written 3 months ago by parvathi.sudha • 10 • updated 7 weeks ago by Biostar ♦♦ 20
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100
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Running cnvkit with nanopore long read ?
cnvkit longread written 7 weeks ago by yeeokkang • 0
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161
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Getting huge size of CNV region from CNV-kit with hybrid data.
cnvkit wes cnv written 12 weeks ago by Makplus T • 70
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431
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cnvkit filtering low depth bins
exome cnvkit exome capture written 17 months ago by pzratnog89 • 10 • updated 3 months ago by linouhao • 0
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148
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CNVkit cnv_ztest with low log2 values
cnvkit germline cnv_ztest exome sequencing written 3 months ago by merella.stefania • 10 • updated 3 months ago by genomax ♦ 91k
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171
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CNVkit with tumor only bam and flat reference
cnvkit tumor cnv written 4 months ago by youki • 0 • updated 4 months ago by genomax ♦ 91k
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2
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1.4k
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2
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Format of VCF for CNVkit call fonction and results
vcf cnvkit format cnv written 3.9 years ago by Hällyss • 50 • updated 4 months ago by Biostar ♦♦ 20
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134
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how to set the number of segments?
cnvkit written 4 months ago by leovam173 • 0
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156
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CNV calling on WGS only on gene positions
cnvkit cnvcalling cnvs written 5 months ago by pabloatienzalo • 0 • updated 5 months ago by RamRS ♦ 30k
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2
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468
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6 follow
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CNVKit noisy scatter plot
cnvkit copy number profile cnv on wes data cnv written 5 months ago by tanbiswas6 • 0 • updated 5 months ago by Eugene A • 80
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Tool: CNVkit, robust genome-wide copy number detection from DNA sequencing
sv python tool cnv cnvkit written 5.4 years ago by Eric T. • 2.6k • updated 5 months ago by tanbiswas6 • 0
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294
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Help with the CNVkit analysis
cnvkit written 6 months ago by kaurravneet4123 • 10
2
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1
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255
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1
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How do you know the best segments in cnvkit after filtering?
cnvkit cnv wgs written 6 months ago by Jordan • 1.2k • updated 6 months ago by brunobsouzaa • 370
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1
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282
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1
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The center in scatter plot generated by CNVkit looks off
scatter-plot cnvkit wgs written 7 months ago by Jordan • 1.2k • updated 6 months ago by d-cameron • 2.2k
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7 follow
1
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ImportError: cannot import name zip_longest
cnvkit written 11 months ago by russell.stewart.j • 0 • updated 6 months ago by moldach • 130
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164
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Analysis using CNVkit tool
cnvkit written 6 months ago by kaurravneet4123 • 10
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224
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How to understand CNVkit output (.cnr, .cns)
cnvkit written 7 months ago by 2yuna710 • 10 • updated 7 months ago by lakhujanivijay ♦ 5.3k
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1
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182
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1
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how to get a male reference when using cnvkit.py batch command
gene cnvkit written 7 months ago by guofengwang123 • 0 • updated 7 months ago by officialoxybreath • 0
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174
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Flat reference vs. pooled reference (unknown target files)
cnvkit written 8 months ago by newbio17 • 240
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2
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2
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Noisy germline CNV data using CNVKit
cnvkit copy number variation germline cnv gcnv written 17 months ago by omg what am I doing • 70 • updated 8 months ago by sutturka • 170
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266
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CNVKit interpretation of results?
cnvkit written 8 months ago by vctrm67 • 20 • updated 8 months ago by jared.andrews07 ♦ 7.6k
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417
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cnvkit Error message "length of weights should be the same as the number of probes Execution halted"
cnvkit sequencing written 9 months ago by lhaiyan3 • 40 • updated 9 months ago by Medhat ♦ 8.8k
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how to use output of cnvkit to plot
R cnvkit written 10 months ago by guofengwang123 • 0 • updated 10 months ago by genomax ♦ 91k
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355
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how to understand output form from CNVkit
wgs cnv cnvkit written 11 months ago by prosium • 0
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5.3k
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2
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 4.7 years ago by alons • 270 • updated 12 months ago by linouhao • 0
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