Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: cnvkit • reset
or   Classic search
<prev • 67 results • page 1 of 3 • next >
0
votes
0
answers
61
views
0
answers
How to deside gene CNVs from .cnr outputs
cnvkit written 22 days ago by guisongtao0104 • 0
0
votes
1
answer
257
views
1
answer
scatter plots with single chromosome gives IndexError
cnvkit bcbio written 4 months ago by fenrir.sivar • 0 • updated 26 days ago by Vijay Lakhujani ♦ 3.2k
2
votes
0
answers
146
views
0
answers
cnvkit flasso interrupt
exome cnvkit written 8 weeks ago by gab • 20
14
votes
1
answer
3.0k
views
1
answer
Help with understanding CNVkit output
cnvkit ngs cnv cancer written 2.7 years ago by alons • 260 • updated 9 weeks ago by RamRS ♦ 19k
2
votes
1
answer
195
views
1
answer
CNVkit import-rna : calculate cnv expression correlation using cBioportal
cnvkit rna-seq written 9 weeks ago by noodle • 30
1
vote
0
answers
179
views
0
answers
Error : run cnvkit from bam
software error cnvkit written 10 weeks ago by reany • 0 • updated 10 weeks ago by finswimmer ♦ 6.9k
0
votes
1
answer
130
views
1
answer
Running cnvkit batch with -y parameter
cnvkit next-gen copynumber sequencing written 11 weeks ago by alyza • 0 • updated 10 weeks ago by Eric T. • 2.3k
0
votes
1
answer
225
views
1
answer
Best variant caller for CNVkit
cnvkit written 3 months ago by milos-91 • 0 • updated 3 months ago by Eric T. • 2.3k
2
votes
2
answers
643
views
2
answers
How to get the range of LOH?
cnvkit written 15 months ago by Tonny • 20 • updated 3 months ago by Shixiang • 30
1
vote
1
answer
171
views
1
answer
CNVkit: gene results not in output
cnvkit written 4 months ago by Lauren • 20 • updated 4 months ago by Eric T. • 2.3k
0
votes
2
answers
247
views
2
answers
minus integer copy number when using --purity for cnvkit
cnvkit written 5 months ago by xiaoqiaoliu • 0 • updated 4 months ago by Eric T. • 2.3k
2
votes
1
answer
221
views
1
answer
Using CNVkit to identify poor-quality normal samples
cnvkit written 5 months ago by Andy Lee • 20 • updated 5 months ago by Eric T. • 2.3k
0
votes
1
answer
281
views
1
answer
Is there a way to plot both tumor and normal samples' copy number segments on the same plot using CNVkit scatter
cnvkit written 7 months ago by asjannu • 0 • updated 6 months ago by Eric T. • 2.3k
1
vote
2
answers
374
views
2
answers
confused about how to run pipeline
cnvkit written 6 months ago by andrew.lamb • 0 • updated 6 months ago by toralmanvar • 660
1
vote
1
answer
247
views
1
answer
CNV details about the normal samples?
cnvkit cnv written 6 months ago by kvn95ss • 0 • updated 6 months ago by toralmanvar • 660
2
votes
1
answer
351
views
1
answer
Is there a way to use CNVkit without a reference from normal samples?
cnvkit sequence written 7 months ago by leandro.bispo.oliveira • 0 • updated 7 months ago by h.mon ♦ 21k
2
votes
2
answers
1.3k
views
2
answers
cnvkit example data
cnvkit bam cnv written 2.5 years ago by laxvid • 10 • updated 8 months ago by Biostar ♦♦ 20
0
votes
1
answer
453
views
1
answer
Regarding Cnvkit analysis
cnvkit written 9 months ago by DL • 10 • updated 9 months ago by Eric T. • 2.3k
3
votes
1
answer
664
views
1
answer
CNVkit - how many normal samples do I need for the pooled normal reference?
genome cnvkit written 9 months ago by ibphuangchen • 10 • updated 9 months ago by Eric T. • 2.3k
0
votes
1
answer
256
views
1
answer
CNVKit - Gene labels in 'diagram'
cnvkit cnv calling written 9 months ago by asjannu • 0 • updated 9 months ago by Eric T. • 2.3k
2
votes
1
answer
586
views
1
answer
tumor/normal WGS with CNVkit has many small segments with small copy number changes
cnvkit cnv wgs written 9 months ago by swheelan • 10 • updated 9 months ago by Eric T. • 2.3k
10
votes
2
answers
658
views
2
answers
CNVKIT import errors
cnvkit python cnv linux written 9 months ago by alons • 260 • updated 9 months ago by Eric T. • 2.3k
0
votes
1
answer
594
views
1
answer
How to merge CNV of multiple samples from CNVkit
cnvkit cnv written 11 months ago by cc • 10 • updated 11 months ago by Eric T. • 2.3k
1
vote
2
answers
517
views
2
answers
cnvkit segmetrics on multiple files
cnvkit cnv written 12 months ago by adoak • 10
1
vote
2
answers
477
views
2
answers
Is cnvkit coverage output split into non-overlapping segments?
exome cnvkit coverage written 13 months ago by fbrundu • 270 • updated 12 months ago by Eric T. • 2.3k
3
votes
1
answer
608
views
1
answer
How to assess confidence of cnvkit calls
cnvkit cnv written 12 months ago by phusion • 0 • updated 12 months ago by Kevin Blighe ♦ 32k
3
votes
1
answer
575
views
1
answer
CNVkit calling strategies with matched-normal tumor
cnvkit whole-exome copy-number-variation written 13 months ago by fbrundu • 270 • updated 13 months ago by Kevin Blighe ♦ 32k
0
votes
1
answer
921
views
1
answer
How to import the output of CNVkit into GISTIC2.0 ?
cnvkit gistic2.0 written 14 months ago by Tonny • 20 • updated 14 months ago by Eric T. • 2.3k
1
vote
1
answer
1.1k
views
1
answer
CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 14 months ago by merella.stefania • 10 • updated 14 months ago by Eric T. • 2.3k
1
vote
1
answer
619
views
1
answer
Error due to annotation file while running target module from CNVkit tool
exome cnvkit cnv sequencing written 14 months ago by arta • 540 • updated 14 months ago by Eric T. • 2.3k
<prev • 67 results • page 1 of 3 • next >
Recent Votes
Recent Locations • All »
  • United Kingdom, just now
  • Royan Institute, Tehran, Iran, just now
  • Copenhagen, 4 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 825 users visited in the last hour