Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: cnvkit • reset
or   Classic search
<prev • 44 results • page 1 of 2 • next >
3
votes
1
answer
94
views
1
answer
CNVkit calling strategies with matched-normal tumor
cnvkit whole-exome copy-number-variation written 7 days ago by fbrundu • 250 • updated 6 days ago by Kevin Blighe • 3.0k
0
votes
1
answer
160
views
1
answer
How to import the output of CNVkit into GISTIC2.0 ?
cnvkit gistic2.0 written 4 weeks ago by Tonny • 20 • updated 4 weeks ago by Eric T. • 1.9k
0
votes
1
answer
198
views
1
answer
CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 4 weeks ago by merella.stefania • 0 • updated 4 weeks ago by Eric T. • 1.9k
1
vote
1
answer
191
views
1
answer
Error due to annotation file while running target module from CNVkit tool
exome cnvkit cnv sequencing written 6 weeks ago by arta • 0 • updated 6 weeks ago by Eric T. • 1.9k
0
votes
2
answers
236
views
2
answers
Using CNVkit for hybrid capture data -- the huge CNV regions in results does not make any sense
cnvkit hybrid capture cnv written 7 weeks ago by wujunjames • 0 • updated 6 weeks ago by Eric T. • 1.9k
2
votes
1
answer
201
views
1
answer
How to get the range of LOH?
cnvkit written 8 weeks ago by Tonny • 20 • updated 8 weeks ago by Eric T. • 1.9k
0
votes
1
answer
261
views
1
answer
Understanding Weight column in .cns files in cnvkit
cnvkit weight call written 9 weeks ago by ingrid.schulman • 0 • updated 9 weeks ago by Eric T. • 1.9k
1
vote
1
answer
225
views
1
answer
Problems using cnvkit for ctDNA targeted sequencing
cnvkit ctdna results written 10 weeks ago by ingrid.schulman • 0 • updated 10 weeks ago by Eric T. • 1.9k
0
votes
1
answer
220
views
1
answer
Recurrent Segmentation Errors
cnvkit written 4 months ago by AndyW • 0 • updated 3 months ago by Eric T. • 1.9k
1
vote
2
answers
235
views
2
answers
"Shifted" copy number ratios coming from cnvkit?
cnvkit somatic copy number written 4 months ago by gil.hornung • 50 • updated 3 months ago by Eric T. • 1.9k
1
vote
1
answer
178
views
1
answer
Question about run cnvkit on DNAnexus
cnvkit snp dnanexus written 4 months ago by qyang • 20 • updated 3 months ago by Eric T. • 1.9k
3
votes
2
answers
228
views
5 follow
2
answers
CNV detection of single cell genome sequencing
cnvkit single cell genome sequencing cnv written 3 months ago by Tonny • 20 • updated 3 months ago by Eric T. • 1.9k
2
votes
1
answer
297
views
1
answer
Using cnvkit for targeted amplicon sequencing
cnvkit targeted amplicon sequencing reference cnv written 3 months ago by ingrid.schulman • 0 • updated 3 months ago by Eric T. • 1.9k
0
votes
0
answers
209
views
0
answers
CNVkit - creating a reference panel from 'normal' parts of tumour bams
cnvkit sequencing cnv tumour written 3 months ago by ferenju • 0
0
votes
1
answer
280
views
1
answer
Using THETA2 from CNVkit: what king of vcf do you need?
cnvkit tumor purity theta2 written 5 months ago by gil.hornung • 50 • updated 5 months ago by Eric T. • 1.9k
0
votes
1
answer
239
views
1
answer
CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 5 months ago by nina.naitatmane • 10 • updated 5 months ago by Eric T. • 1.9k
2
votes
1
answer
613
views
1
answer
How to add a legend to the heatmap?
cnvkit written 8 months ago by gil.hornung • 50
2
votes
1
answer
310
views
1
answer
Explications about call function of CNVkit
cnvkit call written 7 months ago by alice.choury • 50 • updated 7 months ago by Eric T. • 1.9k
1
vote
1
answer
327
views
1
answer
Error 1: NULL byte detected when trying to segment by PSCBS
exome cnvkit copy number segment written 7 months ago by nbay13 • 0 • updated 7 months ago by Eric T. • 1.9k
3
votes
1
answer
351
views
1
answer
CNVkit Segments vs Bins
exome cnvkit copy number segment written 7 months ago by Lauren • 10 • updated 7 months ago by Eric T. • 1.9k
6
votes
1
answer
378
views
1
answer
How is the "weight" calculated by CNVkit ?
cnvkit weight cnv written 7 months ago by alice.choury • 50 • updated 7 months ago by Eric T. • 1.9k
0
votes
1
answer
352
views
1
answer
How to export CNVkit results into PyClone?
cnvkit pyclone written 8 months ago by Jokhe • 40 • updated 8 months ago by Eric T. • 1.9k
3
votes
2
answers
330
views
2
answers
No call for exomes analysis
exome cnvkit written 8 months ago by alice.choury • 50 • updated 8 months ago by Eric T. • 1.9k
1
vote
1
answer
443
views
1
answer
Understanding coverage command
cnvkit written 8 months ago by deber1980 • 0 • updated 8 months ago by Eric T. • 1.9k
2
votes
1
answer
452
views
1
answer
Draw centromere on chromosome scatter plot
cnvkit plot cnv somatic written 9 months ago by alice.choury • 50 • updated 9 months ago by Eric T. • 1.9k
0
votes
1
answer
361
views
1
answer
CNVkit and Ion Torrent Data - Targeted Sequencing
ion torrent cnvkit cnv written 9 months ago by quantrum75 • 0 • updated 9 months ago by Eric T. • 1.9k
1
vote
2
answers
500
views
2
answers
cnvkit output understanding
cnvkit cnv written 9 months ago by runnerbio88 • 90
0
votes
2
answers
439
views
2
answers
Format of VCF for CNVkit call fonction and results
vcf cnvkit format cnv written 10 months ago by alice.choury • 50
1
vote
1
answer
349
views
1
answer
can I use CNVkit for calculating copy number differences in different human population sample data for selected regions?
cnvkit cnv written 10 months ago by jainythomas1 • 10 • updated 10 months ago by Eric T. • 1.9k
3
votes
2
answers
681
views
2
answers
CNVkit : small CNV calling
cnvkit single-exon cnv written 10 months ago by alice.choury • 50 • updated 10 months ago by Eric T. • 1.9k
<prev • 44 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • Greece, just now
  • Austria, just now
  • Belgium, just now
  • UK, U. Glasgow, 1 minute ago
  • Singapore, 2 minutes ago
  • India, 3 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1298 users visited in the last hour