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How are the log2 values in CNVkit .cnr files calculated?
cnvkit .cnr cnv wgs written 7 months ago by Jordan1.2k • updated 6 weeks ago by Kevin Blighe66k
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cnvkit filtering low depth bins
exome cnvkit exome capture written 17 months ago by pzratnog8910 • updated 3 months ago by linouhao0
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CNVkit cnv_ztest with low log2 values
cnvkit germline cnv_ztest exome sequencing written 3 months ago by merella.stefania10 • updated 3 months ago by genomax91k
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CNVkit with tumor only bam and flat reference
cnvkit tumor cnv written 4 months ago by youki0 • updated 4 months ago by genomax91k
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Format of VCF for CNVkit call fonction and results
vcf cnvkit format cnv written 3.9 years ago by Hällyss50 • updated 4 months ago by Biostar ♦♦ 20
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how to set the number of segments?
cnvkit written 4 months ago by leovam1730
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CNV calling on WGS only on gene positions
cnvkit cnvcalling cnvs written 5 months ago by pabloatienzalo0 • updated 5 months ago by RamRS30k
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CNVKit noisy scatter plot
cnvkit copy number profile cnv on wes data cnv written 5 months ago by tanbiswas60 • updated 5 months ago by Eugene A80
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Tool: CNVkit, robust genome-wide copy number detection from DNA sequencing
sv python tool cnv cnvkit written 5.4 years ago by Eric T.2.6k • updated 5 months ago by tanbiswas60
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Help with the CNVkit analysis
cnvkit written 6 months ago by kaurravneet412310
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How do you know the best segments in cnvkit after filtering?
cnvkit cnv wgs written 6 months ago by Jordan1.2k • updated 6 months ago by brunobsouzaa370
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The center in scatter plot generated by CNVkit looks off
scatter-plot cnvkit wgs written 7 months ago by Jordan1.2k • updated 6 months ago by d-cameron2.2k
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ImportError: cannot import name zip_longest
cnvkit written 11 months ago by russell.stewart.j0 • updated 6 months ago by moldach130
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Analysis using CNVkit tool
cnvkit written 6 months ago by kaurravneet412310
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How to understand CNVkit output (.cnr, .cns)
cnvkit written 7 months ago by 2yuna71010 • updated 7 months ago by lakhujanivijay5.3k
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how to get a male reference when using cnvkit.py batch command
gene cnvkit written 7 months ago by guofengwang1230 • updated 7 months ago by officialoxybreath0
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Noisy germline CNV data using CNVKit
cnvkit copy number variation germline cnv gcnv written 17 months ago by omg what am I doing70 • updated 8 months ago by sutturka170
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CNVKit interpretation of results?
cnvkit written 8 months ago by vctrm6720 • updated 8 months ago by jared.andrews077.6k
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how to use output of cnvkit to plot
R cnvkit written 10 months ago by guofengwang1230 • updated 10 months ago by genomax91k
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 4.7 years ago by alons270 • updated 12 months ago by linouhao0
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