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15
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2
answers
4.9k
views
2
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 4.3 years ago by alons270 • updated 6 months ago by linouhao0
1
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1
answer
2.5k
views
1
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CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 2.7 years ago by merella.stefania10 • updated 2.7 years ago by Eric T.2.6k
2
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1
answer
2.4k
views
1
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How to add a legend to the heatmap?
cnvkit written 3.3 years ago by gil.hornung70
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5
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2.3k
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5
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CNVkit runtime for WGS?
cnvkit written 4.3 years ago by wjar67180
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1
answer
2.2k
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1
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How to import the output of CNVkit into GISTIC2.0 ?
cnvkit gistic2.0 written 2.7 years ago by Tonny20 • updated 2.7 years ago by Eric T.2.6k
3
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2
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2.2k
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6 follow
2
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CNVkit : small CNV calling
cnvkit single-exon cnv written 3.5 years ago by Hällyss50 • updated 3.5 years ago by Eric T.2.6k
1
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1
answer
2.2k
views
1
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CNV not called
cnvkit exome copy number written 4.7 years ago by vps76710
4
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0
answers
2.1k
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0
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Tool: CNVkit, robust genome-wide copy number detection from DNA sequencing
sv python tool cnv cnvkit written 4.9 years ago by Eric T.2.6k • updated 13 days ago by tanbiswas60
2
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2
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2.1k
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2
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cnvkit output understanding
cnvkit cnv written 3.4 years ago by Folder40g120
1
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1
answer
2.1k
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1
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Error 1: NULL byte detected when trying to segment by PSCBS
exome cnvkit copy number segment written 3.2 years ago by nbay130 • updated 3.2 years ago by Eric T.2.6k
7
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1
answer
2.0k
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1
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How is the "weight" calculated by CNVkit ?
cnvkit weight cnv written 3.2 years ago by Hällyss50 • updated 3.2 years ago by Eric T.2.6k
2
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2
answers
2.0k
views
2
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cnvkit example data
cnvkit bam cnv written 4.0 years ago by laxvid10 • updated 2.2 years ago by Biostar ♦♦ 20
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3
answers
1.9k
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3
answers
1
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1
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1.9k
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1
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CNVkit - Format of VCF file
cnvkit written 4.1 years ago by fongchunchan10 • updated 4.1 years ago by Eric T.2.6k
6
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1
answer
1.9k
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1
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CNVkit Segments vs Bins
exome cnvkit copy number segment written 3.2 years ago by Lauren70 • updated 3.2 years ago by Eric T.2.6k
2
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1
answer
1.9k
views
1
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CNVkit: CSV error when testing installation
cnvkit written 3.9 years ago by opm0 • updated 3.9 years ago by Eric T.2.6k
0
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1
answer
1.8k
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1
answer
Help on understanding CNVkit CN1/CN2
cnvkit written 3.6 years ago by phusion0
0
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1
answer
1.8k
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1
answer
How to export CNVkit results into PyClone?
cnvkit pyclone written 3.3 years ago by Jokhe110 • updated 3.3 years ago by Eric T.2.6k
0
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1
answer
1.8k
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1
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Using THETA2 from CNVkit: what king of vcf do you need?
cnvkit tumor purity theta2 written 3.0 years ago by gil.hornung70 • updated 3.0 years ago by Eric T.2.6k
5
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2
answers
1.7k
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2
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Why do I get a weird copy number in the tumour?
cnvkit theta2 written 4.1 years ago by w.jaratlerdsiri10 • updated 4.0 years ago by hywg20
3
votes
2
answers
1.7k
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5 follow
2
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CNV detection of single cell genome sequencing
cnvkit single cell genome sequencing cnv written 2.9 years ago by Tonny20 • updated 2.9 years ago by Eric T.2.6k
0
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1
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1.7k
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1
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Interpretation of sex chromosome ploidy using CNVKit
cnvkit sex chromosome written 4.0 years ago by andcl930 • updated 4.0 years ago by 2nelly180
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1
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1.6k
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1
answer
CNVkit - Proper Way to Generate Accurate Sex Chromosome Predictions
cnvkit written 4.0 years ago by fongchunchan10 • updated 4.0 years ago by Eric T.2.6k
2
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1
answer
1.6k
views
1
answer
CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 3.0 years ago by nina.naitatmane20 • updated 3.0 years ago by Eric T.2.6k
1
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2
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1.6k
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2
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"Shifted" copy number ratios coming from cnvkit?
cnvkit somatic copy number written 3.0 years ago by gil.hornung70 • updated 2.9 years ago by Eric T.2.6k
3
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1
answer
1.6k
views
1
answer
CNVkit - how many normal samples do I need for the pooled normal reference?
genome cnvkit written 2.3 years ago by ibphuangchen10 • updated 2.3 years ago by Eric T.2.6k
3
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2
answers
1.6k
views
2
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CNVkit: Overlapping Segments?
cnvkit written 3.9 years ago by fongchunchan10
2
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1
answer
1.5k
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1
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Draw centromere on chromosome scatter plot
cnvkit plot cnv somatic written 3.4 years ago by Hällyss50 • updated 3.3 years ago by Eric T.2.6k
10
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2
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1.4k
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2
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CNVKIT import errors
cnvkit python cnv linux written 2.3 years ago by alons270 • updated 2.3 years ago by Eric T.2.6k
4
votes
0
answers
1.4k
views
0
answers
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