Showing: cnvkitreset
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4
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15
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Help with understanding CNVkit output
cnvkit ngs cnv cancer written 3.4 years ago by alons270 • updated 10 months ago by RamRS22k
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6
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CNVkit Segments vs Bins
exome cnvkit copy number segment written 2.4 years ago by Lauren50 • updated 2.4 years ago by Eric T.2.5k
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CNV not called
cnvkit exome copy number written 3.8 years ago by vps76710
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2
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Why do I get a weird copy number in the tumour?
cnvkit theta2 written 3.3 years ago by w.jaratlerdsiri10 • updated 3.2 years ago by hywg20
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Draw centromere on chromosome scatter plot
cnvkit plot cnv somatic written 2.5 years ago by alice.choury50 • updated 2.5 years ago by Eric T.2.5k
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How is the "weight" calculated by CNVkit ?
cnvkit weight cnv written 2.4 years ago by alice.choury50 • updated 2.4 years ago by Eric T.2.5k
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Explications about call function of CNVkit
cnvkit call written 2.4 years ago by alice.choury50 • updated 2.3 years ago by Eric T.2.5k
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CNVkit reference.cnn .cnr .cns log ratio
cnvkit cnv written 2.2 years ago by nina.naitatmane20 • updated 2.2 years ago by Eric T.2.5k
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5 follow
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CNV detection of single cell genome sequencing
cnvkit single cell genome sequencing cnv written 2.0 years ago by Tonny20 • updated 2.0 years ago by Eric T.2.5k
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How to get the range of LOH?
cnvkit written 23 months ago by Tonny20 • updated 12 months ago by Shixiang40
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1
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CNVkit for germline samples
cnvkit next-gen targetsequencing germline written 22 months ago by merella.stefania10 • updated 22 months ago by Eric T.2.5k
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cnvkit segmetrics on multiple files
cnvkit cnv written 20 months ago by adoak10
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CNVKIT import errors
cnvkit python cnv linux written 18 months ago by alons270 • updated 18 months ago by Eric T.2.5k
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1
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tumor/normal WGS with CNVkit has many small segments with small copy number changes
cnvkit cnv wgs written 18 months ago by swheelan10 • updated 18 months ago by Eric T.2.5k
2
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1
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Best variant caller for CNVkit
cnvkit written 11 months ago by milos-9110 • updated 11 months ago by Eric T.2.5k
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2
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CNVkit: Choice of Bin Size and CNV Calling
cnvkit genemetrics written 4 months ago by wei.wei10 • updated 4 months ago by Chris Miller21k
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1
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Passing cnvkit output to pureCN to account for cellularity
cnvkit purecn written 12 weeks ago by biologist10 • updated 12 weeks ago by markus.riester480
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5
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5
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CNVkit runtime for WGS?
cnvkit written 3.5 years ago by wjar67180
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CNVkit - Format of VCF file
cnvkit written 3.2 years ago by fongchunchan10 • updated 3.2 years ago by Eric T.2.5k
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Interpretation of sex chromosome ploidy using CNVKit
cnvkit sex chromosome written 3.2 years ago by andcl930 • updated 3.2 years ago by 2nelly160
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cnvkit example data
cnvkit bam cnv written 3.2 years ago by laxvid10 • updated 16 months ago by Biostar ♦♦ 20
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CNVkit - Proper Way to Generate Accurate Sex Chromosome Predictions
cnvkit written 3.2 years ago by fongchunchan10 • updated 3.1 years ago by Eric T.2.5k
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CNVkit: Overlapping Segments?
cnvkit written 3.1 years ago by fongchunchan10
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CNVkit: CSV error when testing installation
cnvkit written 3.0 years ago by opm0 • updated 3.0 years ago by Eric T.2.5k
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