Showing: combatreset
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ComBat on TCGA RNAseq data generates all NAN
tcga combat written 17 months ago by mforde841.2k • updated 7 days ago by coyoung0
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Using ComBat on RNASeq FPKM counts
combat rna-seq written 2.1 years ago by ebrudermanver40 • updated 3 months ago by Kevin Blighe32k
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390
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Help with multiple batch effects
sva batch effects combat written 4 months ago by fp890 • updated 4 months ago by genomax58k
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Batch effects : ComBat or removebatcheffects (limma package) ?
sva batch effects combat limma written 15 months ago by lessismore520 • updated 12 months ago by Kevin Blighe32k
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Error in while (change > conv) { : missing value where TRUE/FALSE needed
combat rna-seq batch effect written 13 months ago by lessismore520 • updated 13 months ago by Biostar ♦♦ 20
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RNA-Seq Batch correction negative values
batch-effect combat scran rna-seq sva written 13 months ago by rmf440 • updated 13 months ago by Kevin Blighe32k
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Time point microarray data correcting for batch effects
combat microarray batch effect written 15 months ago by tleona310 • updated 15 months ago by mforde841.2k
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svaseq and combat
combat sva effect batch written 18 months ago by Folder40g110 • updated 16 months ago by Biostar ♦♦ 20
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removing batch effects using ComBat and SVA
R sva combat batch effect written 2.4 years ago by LJ150 • updated 16 months ago by lessismore520
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Converting beta value to M value (when beta=1)
dna methylation combat written 16 months ago by janhuang.cn120 • updated 16 months ago by Devon Ryan86k
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R: Error when using ComBat
R sva combat written 2.2 years ago by kkj30830 • updated 19 months ago by susanna.downing0
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Remove Surrogate Variables and Batch
R sva combat written 4.0 years ago by tucanj70 • updated 2.1 years ago by ddiez1.7k
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ComBat (SVA) Application - Two Technical Effects
bioconductor combat sva written 3.8 years ago by andrew.j.skelton735.4k • updated 2.1 years ago by Biostar ♦♦ 20
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Remove Batch Effect From RNAseq with SVAseq and Combat
combat svaseq model.matrix rna-seq batch effect written 3.7 years ago by cankutcubuk170 • updated 2.3 years ago by amoltej80
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what is the meaning of covariates in ComBat
R combat written 2.4 years ago by LJ150
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17 follow
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Are we tricking ourselves with batch effect correction?
sva combat batch effect written 3.5 years ago by Christian2.7k • updated 2.5 years ago by vegard nygaard130
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Combat normalization returns negative values
batch correction sva combat rna-seq R written 2.8 years ago by lahat.albert50 • updated 2.8 years ago by mamunbabu200140
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Normalizing For Batch Effect In RNA-Seq Data
batch-effect principle-component combat rna-seq written 4.6 years ago by Tom A80 • updated 3.0 years ago by tonja.r430
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How to remove batch effect from RNA-seq data?
sva deseq2 combat rna-seq batch written 3.4 years ago by alesssia480 • updated 3.4 years ago by Michael Love1.6k
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