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esearch query does not return sorted results from NCBI EDirect
ncbi edirect esearch command-line entrez written 4.8 years ago by ciclistadan30 • updated 2.1 years ago by h.mon31k
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Renaming fasta headers according to a matching name list
sequence text-processing command-line written 4.7 years ago by san.san160 • updated 2.6 years ago by na.poorin0
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Getting a bash pipeline to output non-zero exit code when a step fails
bash sh command-line written 2.8 years ago by SaltedPork110 • updated 2.8 years ago by bernatgel2.7k
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Lightweight Structure Viewer, Callable From Linux Command Line
viewer structure command-line written 9.5 years ago by Lyco2.3k • updated 2.8 years ago by Biostar ♦♦ 20
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Dividing A Protein Sequence Into Equal Parts
command-line written 8.2 years ago by Nitish Mishra30 • updated 2.8 years ago by Biostar ♦♦ 20
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Useful Bash Commands To Handle Fasta Files
fasta list command-line bash written 8.8 years ago by Anima Mundi2.8k • updated 3.1 years ago by Joe18k
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Running MSigDB locally *without* expression data
msigdb command-line written 4.8 years ago by Kasthuri270 • updated 3.8 years ago by predeus1.4k
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Renaming fasta file according to a name list (blast output)
fasta sequence command-line written 4.2 years ago by san.san160 • updated 4.2 years ago by shenwei3565.6k
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Show Progress (Bar?) For Blast+ Query
command-line blast written 8.9 years ago by Leonardo Normando60 • updated 4.2 years ago by holgerbrandl30
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Processing FASTQ files after fastq-dump
sequencing command-line linux written 4.4 years ago by SOHAIL320 • updated 4.4 years ago by Antonio R. Franco4.5k
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specifying "GI mapping files" for MEGAN5 on command line interface
metagenomics taxonomy command-line megan written 5.1 years ago by JV410 • updated 5.0 years ago by bedeabc110
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Command To Change Fasta File Format
command-line linux written 7.0 years ago by biolab1.2k • updated 5.4 years ago by Biostar ♦♦ 20
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Outgroup from command line
phylogeny perl outgroup raxml command-line written 6.2 years ago by Lee Katz3.0k • updated 6.2 years ago by David W4.8k
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Plink --Update-Alleles Command Is Not Resulting In Right Way
plink command-line written 7.7 years ago by kumar.vinod81280 • updated 6.6 years ago by Biostar ♦♦ 20
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Command Line Genome Browser
annotation command-line genome-browser written 6.7 years ago by Lee Katz3.0k • updated 6.7 years ago by Istvan Albert ♦♦ 85k
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A Tool For Flagging Blast Searches?
command-line blast+ written 6.8 years ago by ishengomae110 • updated 6.8 years ago by Daniel3.8k
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