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written 7 weeks ago by
peifei0418 • 0
• updated
7 weeks ago by
kreemangjuriya • 0
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Recent Replies
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C: mirdeep2 step-by-step tutorial by
13530213 • 10
http://petang.cgu.edu.tw/Bioinfomatics/Lecture/0_HTS/2015/04/
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C: Adding gene names to fasta file by
Joe ♦ 18k
What is the relationship between `CG2918` and `dmel_X `? Are they simply in order as @rpolicastro...
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C: K-mer sequencing vs sequence-alignment by
Joe ♦ 18k
Separate to my answer below, I would contend that the right hand alignment is all that realistic ...
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C: K-mer sequencing vs sequence-alignment by
Joe ♦ 18k
You wouldn't generally use kmers this short as the odds of finding spurious matches becomes massi...
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C: sortmerna terminates without generating the file with rRNA being removed by
Dunois • 440
So it was just the compressed file then? I hope everything goes smoothly hereonforth.
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C: ColSideColors' must be a character vector of length ncol(x) by
Kevin Blighe ♦ 69k
You have 2 colours and 2 groups? If that is the case, then this should work myColors[condn] ...
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C: Mutating columns by changing units - R/dplyr solution by
Dunois • 440
Never realized `case_when()` is a thing. TIL. Thank you!!
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C: K-mer sequencing vs sequence-alignment by
GenoMax ♦ 94k
If you intend to identify genes then using this toy example is inappropriate. One would need to u...
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C: Adding gene names to fasta file by
rpolicastro ♦ 3.2k
Are the gene names in the file the same order as the fasta entry for which it matches?
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C: Count matrices correction before integrating single-cell RNA-seq datasets by
rpolicastro ♦ 3.2k
Is this from a paper or a collaborator?
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C: K-mer sequencing vs sequence-alignment by
ATpoint ♦ 44k
Cross-posted: https://bioinformatics.stackexchange.com/questions/15234/k-mer-sequencing-vs-sequen...
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C: Count matrices correction before integrating single-cell RNA-seq datasets by
berry • 30
Hi Friederike, thank you for your reply. I only have access to CellRanger outputs unfortunately.
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