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compiling kmergenie 1.7038. Is it possible?

compilation kmergenie kmer written 2.5 years ago by torsten • 0 • updated 2.4 years ago by Rayan Chikhi • 1.4k

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DRIMM-synteny : C# compilation errors in Ubuntu 14.04 LTS

drimm compilation c# synteny software error written 4.1 years ago by jigen.no.majou • 0 • updated 4.1 years ago by Biostar ♦♦ 20

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Recent Replies

C: help with biopython by RamRS ♦ 22k
If it's Entrez Gene ID (human/mouse/other popular organism), you can use the `TxDb` package to ge...
C: BAM/SAM to FASTA conversion by xiaoleiusc • 0
Thanks. I need FASTA output from SAM input, you mean to make sure my SAM file (not FASTA file) is...
C: BAM/SAM to FASTA conversion by Alex Reynolds ♦ 28k
Put the directory containing the Perl script into your environment PATH, or run it with Perl. Mak...
C: WGBS alignment with BitMapperBS by hcheng • 50
Thank you so much! You know in most cases editors do not use the reviewers recommended by the aut...
A: VCF File type by manuel.belmadani • 920
That group is called the "genotype", and yes, you could have `2` or higher if there's 2 or more n...
C: WGBS alignment with BitMapperBS by Shicheng Guo • 7.6k
Maybe you didn't suggest the best reviewers. Sure. different people have different comments to sa...
C: Correcting batch effect in unevenly distributed groups by Kevin Blighe ♦ 45k
It may help to explain what are these groups, as understanding the biology can be important. I un...
C: VCF file from DanteLabs Dante Labs does not load in IGV by Charles Warden ♦ 7.0k
Hi - I probably won't be ordering a Dante Labs kit this year. I'm trying to wrap up the analysis...
C: VCF file from DanteLabs Dante Labs does not load in IGV by rob • 10
Hey! - I've recently purchased WGS from Dante (the 30x product) and plan to upload everything to ...
C: Fast download of FASTQ files from the European Nucleotide Archive (ENA) by Kevin Blighe ♦ 45k
Hey, take a look at the comment trail, from here: https://www.biostars.org/p/325010/#389254 Also,...
C: What kind of Affymetrix SNP 6.0 datafile is this? by Kevin Blighe ♦ 45k
So, you need expression data? Then you should be looking for the Affymetrix expression arrays, no...
A: Nucleotide to amino acid conversion of multiple sequences by swbarnes2 ♦ 6.0k
If you know what they should translate to, I'd use blastx. Then blastx will handle getting the f...

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