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4
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118
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python calculation of protein multiple sequence alignment
conservation python alignment written 4 weeks ago by ttubiana • 20 • updated 4 weeks ago by Macspider • 3.2k
0
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0
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110
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0
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How to calculate PhyloP score for only primates and rodents?
genome conservation phylop written 4 months ago by xinrantian • 10
1
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1
answer
131
views
1
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Whole-genome human-mouse syntenic block tracks/database
genome mouse conservation homology synteny written 5 months ago by Papyrus • 370
2
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1
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345
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1
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How to get the phastcons score for protein coding genes and lncRNAs?
genome conservation phastcons rna-seq written 7 months ago by newbie • 90 • updated 7 months ago by gayachit • 200
9
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2
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672
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2
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Which conservation score to use to measure conservation of splice sites?
conservation compartive genomics written 16 months ago by i.sudbery ♦ 9.4k • updated 16 months ago by Ian ♦ 5.7k
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0
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304
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0
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Downloading conserved untranscribed sequences of multiple species
conservation alignment noncoding untranscribed written 17 months ago by max.rempel2 • 0
5
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2
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684
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2
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Looking for a database containing the least-conserved, most highly polymorphic SNPs (or regions) of the human genome (hg38)
conservation human snp written 21 months ago by fwuffy • 100 • updated 21 months ago by colindaven • 2.4k
2
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0
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723
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0
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mm10 phyloP download for custom tracks
conservation phylop ucsc written 2.0 years ago by rbronste • 360 • updated 23 months ago by Biostar ♦♦ 20
5
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1
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4.1k
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1
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Measuring Conservation
conservation sequence written 8.5 years ago by Loki • 30 • updated 24 months ago by Biostar ♦♦ 20
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0
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344
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0
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Deriving phyloP based branch length scores
conservation phylop phastcons branch written 24 months ago by rbronste • 360
0
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0
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841
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0
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how to find lineage specific dissimilar regions in an alignment?
phylogeny conservation alignment tree written 3.0 years ago by Elendol • 0 • updated 2.2 years ago by Biostar ♦♦ 20
0
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0
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439
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0
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Align UniRef Cluster for conservation study
conservation align written 2.5 years ago by Benni • 30
0
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1
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736
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1
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Trying to use Siphy to get pi scores for each position
conservation broad siphy written 2.7 years ago by Andy Lee • 10
3
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1
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3.5k
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1
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Comparing gene conservation across species
gene conservation written 5.5 years ago by oganm • 60 • updated 3.2 years ago by Biostar ♦♦ 20
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1.9k
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0
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Gene lists and calculated Ka/Ks ratio per gene
conservation gene family written 5.8 years ago by Floris Brenk • 970 • updated 3.3 years ago by Biostar ♦♦ 20
0
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1
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1.8k
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1
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Has anyone used GET_HOMOLOGUES
conservation ortholog protein comparative genomics written 6.5 years ago by Sujai Kumar • 240 • updated 3.4 years ago by bcontreras • 10
6
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2
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883
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2
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I have DNA motifs 6-12 bp long. Trying to get conservation measurements for them.
conservation motif written 3.4 years ago by ericbrenner • 0 • updated 3.4 years ago by shenwei356 ♦ 5.5k
0
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1
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1.1k
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1
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Getting Precomputed Conservation Scores
genome conservation snp written 3.5 years ago by GabrielMontenegro • 560 • updated 3.5 years ago by Santosh Anand ♦ 5.2k
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0
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837
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0
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Protein protein interaction conservation scores
conservation ppi scores written 3.6 years ago by Saad Khan • 400
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0
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1.3k
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0
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Conservation Score Of Amino Acid Positions (2017)
conservation amino acid protein msa written 3.6 years ago by bhffs01 • 10
8
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2
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1.7k
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2
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How to get conservation information for bed file using 100wayPhastCons
genome bed conservation sequence written 3.6 years ago by chrys • 40 • updated 3.6 years ago by Alex Reynolds ♦ 31k
2
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0
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970
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0
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Batch conservation analysis
conservation fasta batch genome written 3.7 years ago by chrys • 40
2
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1
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1.6k
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1
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How to calculate the conservation score of a short RNA sequence?
conservation ucsc phastcons mirna mirna target written 3.8 years ago by Bjoux • 0
0
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0
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993
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0
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calculating conservation depth of multiple regions(in form of bed coordinates)
conservation alignment phastcons ucsc chain files written 4.2 years ago by amna.farooq • 0
8
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5
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7.6k
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7 follow
5
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Conservation Score Of Amino Acid Positions In Human Proteins
conservation sequence protein snp written 9.9 years ago by Khader Shameer ♦ 18k • updated 4.2 years ago by mg0010 • 10
10
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1
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1.7k
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1
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Visualization of maf alignments in JBrowse
conservation multiz alignments .maf written 4.5 years ago by ifreecell • 180 • updated 4.4 years ago by cmdcolin • 1.4k
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2
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2.3k
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2
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Conservation Scores Concept
conservation ucsc written 7.2 years ago by anuragm • 130 • updated 4.4 years ago by Denise CS • 5.1k
0
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1
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2.5k
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1
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GERP score for all positions
conservation gerp annotation gerp written 4.4 years ago by always_learning • 1.1k
0
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0
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989
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0
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calculating the conservation between TADs with statistical significance
conservation topologically associating domains written 4.6 years ago by ancient_learner • 630
12
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5
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6 follow
5
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How Can I Find The Conserved Microrna Genes Between Human And Mouse
conservation mirna written 9.0 years ago by K-Li • 80 • updated 4.7 years ago by mongaisha4 • 0
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