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Nanopore data decontamination
ont decontamination nanopore contamination written 10 weeks ago by Juke-343.7k • updated 4 weeks ago by Biostar ♦♦ 20
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rRNA removal needed for salmon / DESeq2 analysis
rrna deseq2 salmon contamination written 17 months ago by mark.dunning210 • updated 4 months ago by ATpoint32k
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How do I know if I have DNA contamination in RNA-seq data?
contamination rna-seq written 13 months ago by blur110 • updated 4 months ago by zebasilio0
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Problem to run checkm.
fasta contamination checkm written 9 months ago by vincentpailler110 • updated 9 months ago by Asaf7.3k
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Estimating cross contamination in a set of BAMS
bam contamination written 21 months ago by Pierre Lindenbaum127k • updated 21 months ago by igor9.9k
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Blast many read sequences
reads alignment contamination blast written 22 months ago by zoegward100 • updated 22 months ago by lakhujanivijay4.8k
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Tool: Introducing CrossBlock, a BBTool for removing cross-contamination
crossblock bbmap contamination mda tool written 3.2 years ago by Brian Bushnell17k • updated 2.4 years ago by awwood0
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20% of unknown-source contamination RNA-Seq Illumina
contamination rna-seq sequencing written 2.8 years ago by crimsontabaq40 • updated 2.8 years ago by Brian Bushnell17k
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BLAT against nt
2bit fasta nt contamination blat written 3.2 years ago by Assa Yeroslaviz1.3k
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ribosomal RNA contamination
rnaseq rrna contamination written 3.2 years ago by lkmklsmn920 • updated 3.2 years ago by Devon Ryan94k
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Read filtering strategy and BWA
contamination bwa written 3.3 years ago by Picasa490 • updated 3.3 years ago by Brian Bushnell17k
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