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Nanopore data decontamination
ont decontamination nanopore contamination written 7 months ago by Juke344.6k • updated 6 months ago by Biostar ♦♦ 20
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rRNA removal needed for salmon / DESeq2 analysis
rrna deseq2 salmon contamination written 22 months ago by mark.dunning210 • updated 9 months ago by ATpoint38k
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How do I know if I have DNA contamination in RNA-seq data?
contamination rna-seq written 19 months ago by blur140 • updated 10 months ago by zebasilio0
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Problem to run checkm.
fasta contamination checkm written 15 months ago by pablo140 • updated 15 months ago by Asaf8.4k
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Estimating cross contamination in a set of BAMS
bam contamination written 2.3 years ago by Pierre Lindenbaum130k • updated 2.3 years ago by igor11k
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Blast many read sequences
reads alignment contamination blast written 2.3 years ago by zoegward100 • updated 2.3 years ago by lakhujanivijay5.2k
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Tool: Introducing CrossBlock, a BBTool for removing cross-contamination
crossblock bbmap contamination mda tool written 3.7 years ago by Brian Bushnell17k • updated 2.9 years ago by awwood0
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20% of unknown-source contamination RNA-Seq Illumina
contamination rna-seq sequencing written 3.2 years ago by crimsontabaq50 • updated 3.2 years ago by Brian Bushnell17k
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BLAT against nt
2bit fasta nt contamination blat written 3.6 years ago by Assa Yeroslaviz1.4k
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ribosomal RNA contamination
rnaseq rrna contamination written 3.7 years ago by lkmklsmn930 • updated 3.7 years ago by Devon Ryan96k
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Read filtering strategy and BWA
contamination bwa written 3.7 years ago by Picasa540 • updated 3.7 years ago by Brian Bushnell17k
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