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<prev • 29 results • page 1 of 1 • next >
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Number of reference sequence contigs in sam/bam header does not match the number in my fasta
fasta bowtie2 contig sam bam written 3 months ago by marcusanaymik • 10 • updated 3 months ago by Brian Bushnell ♦ 12k
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219
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How to map NCBI contig positions to chromosome positions
ncbi contig ribosomal grch37.13 written 4 months ago by Jackie • 40 • updated 4 months ago by genomax ♦ 29k
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0
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314
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Contigs Taxonomy from assembled metagenomes
metagenomics taxonomy metagenome contig written 4 months ago by David • 50
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0
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275
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Contig's coverage and bam files.
contig coverage bam written 7 months ago by Picasa • 290 • updated 5 months ago by Biostar ♦♦ 20
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294
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What is the format of *.contigs.fasta files?
fasta next-gen contig written 9 months ago by Na Sed • 250 • updated 9 months ago by genomax ♦ 29k
5
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1
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766
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1
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What are contig, singleton read and discordant mate pairs?
singleton reads contig discordant mate pairs written 16 months ago by MAPK • 970
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1
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837
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1
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Contig length distribution plotting with R
plotting R contig length written 17 months ago by seta • 890 • updated 17 months ago by h.mon ♦ 6.6k
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583
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Transcriptome assembly improvement with Soap-denovo trans
assembly contig rna-seq soap-denovo trans written 18 months ago by seta • 890
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2
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1.8k
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2
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Spades Assembler output
assembly contig spades written 19 months ago by midox • 180 • updated 19 months ago by MathGon • 10
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1
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528
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1
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contigs alignment with long reads
ngs alignment contig written 20 months ago by midox • 180
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473
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traversal stats explanations
assembly contig quast traversal minia written 21 months ago by pbigbig • 170
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0
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458
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0
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What is "M" letter in the singlets output file generated by CAP3
singlets assembly contig cap3 written 20 months ago by seta • 890
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1
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866
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1
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contig with overlaps. how to circularize?
genome assembly contig circular dna written 22 months ago by jolespin • 80 • updated 22 months ago by Philipp Bayer ♦ 4.3k
1
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1
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709
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1
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Nice open source alternative to "contig viewer" in SeqMan Pro
seqman contig paired end written 22 months ago by mschmid • 90 • updated 22 months ago by Lesley Sitter • 410
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2
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730
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2
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Tool to detect closed contigs in FASTA/FASTQ file
contig close assambly written 22 months ago by mschmid • 90
2
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1
answer
780
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1
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Split BAM into 1 BAM per contig
contig sam written 24 months ago by Marvin • 90 • updated 24 months ago by Pierre Lindenbaum ♦ 95k
1
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1
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1.1k
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1
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Mapping Contigs based on Reference Genome
genome contig mapping written 2.0 years ago by Tanvir Ahamed • 210 • updated 2.0 years ago by h.mon ♦ 6.6k
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1
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685
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1
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generation of contigs from sanger sequencing
sequence contig written 2.1 years ago by jasbadesha27 • 0 • updated 2.1 years ago by Antonio R. Franco • 3.3k
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720
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How to compare contigs with an existing protein from a species ?
contig sequence blastx dna written 2.3 years ago by carerjose • 0 • updated 2.2 years ago by Biostar ♦♦ 20
2
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1.3k
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Problem replacing contigs in a dbsnp vcf using Picard SortVcf
vcf picard contig written 2.2 years ago by idedios • 30
1
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1
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934
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1
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SOAPdenovo: what is the input file of the second step (the command "contig") ?
genome assembly contig soapdenovo written 2.3 years ago by alecloic • 30
3
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1
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1.1k
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1
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Contigs unmapped to reference, Sanger sequencing assembly improvements and plasmid DNA
assembly next-gen contig sequencing written 2.3 years ago by a.a.kechin • 20 • updated 2.3 years ago by rob234king • 530
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456
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Contig linking with specific sequence
assembly contig written 2.4 years ago by jeccy.J • 50
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2
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1.2k
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2
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Taxonomic assignments to metagenomic sequences
organism contig sequence metagenome taxonomy written 2.4 years ago by jolespin • 80 • updated 2.4 years ago by iraun • 3.1k
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4
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1.6k
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4
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How to extract contigs from FASTA file which contains specific sequence
fasta find extraction contig written 2.5 years ago by Paul • 600 • updated 2.5 years ago by Matt Shirley ♦ 7.3k
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2
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How do I choose among velvet assembled contigs with different k (k-mer) values?
velvetg assembly contig velvet written 2.8 years ago by whatup • 30 • updated 2.8 years ago by Adrian Pelin • 2.0k
0
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871
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Contigs of same genes have lots of different bases, How can I understand which is reliable?
assembly contig next-gen alignment written 3.0 years ago by ada • 0 • updated 2.9 years ago by Biostar ♦♦ 20
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1
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1.4k
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1
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Tool for Contig joining on overlaps ?
contig rna-seq written 2.9 years ago by perrettony • 0 • updated 2.9 years ago by Prakki Rama • 2.0k
6
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Can one get the entire genome by putting all contigs together in this particular case?
genome sequence contig written 3.0 years ago by John Smith • 200 • updated 3.0 years ago by Philipp Bayer ♦ 4.3k
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