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6
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Removing small contigs from fasta files
perl assembly contigs fasta written 4 months ago by subrahmanya0 • updated 4 weeks ago by mejait9920
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Assembly size decreased after using SSPACE for scaffolding
sspace contigs assembly size scaffolding written 9 weeks ago by deepti1rao30 • updated 7 weeks ago by Biostar ♦♦ 20
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4
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Counting Contigs in Fasta/GBK File
genome contigs checkm written 10 weeks ago by biohacker_tobe40 • updated 10 weeks ago by Joe16k
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Convert abyss scaffolds to contigs
contigs abyss written 4 months ago by jm4400 • updated 4 months ago by h.mon29k
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5
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Merge contigs in fasta file
fasta merge contigs written 10 months ago by Rubal310 • updated 10 months ago by finswimmer13k
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Prokka setupdb issue
annotation contigs prokka assembly written 12 months ago by DanielC120
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 2.2 years ago by fhsantanna470 • updated 12 months ago by bhclement0
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Where can I find publicly available metagenomics contig datsets?
metagenomics contigs datasets written 14 months ago by vijinim100 • updated 13 months ago by Jonathanjacobs240
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assembly of contigs into scaffolds
assembly contigs scaffolds written 15 months ago by M.Nadeem Khan0 • updated 15 months ago by shubhra.bhattacharya120
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411
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Is there a standard file format for anchored contigs?
genome assembly linkage map contigs anchor contigs written 15 months ago by brogroh0 • updated 15 months ago by cmdcolin1.3k
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4
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Contig name in SAM file
contig contigs sam contig name written 16 months ago by maryam.9510 • updated 16 months ago by WouterDeCoster43k
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Thousands of contigs in E.coli assembly
genome assembly contigs prokka written 19 months ago by vitorgomesbio0 • updated 19 months ago by Biostar ♦♦ 20
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Order of contigs
contigs written 19 months ago by agata88790 • updated 19 months ago by piet1.7k
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SSPACE for scaffolding
contigs sspace insert size bbmap scaffolding written 23 months ago by deepti1rao30 • updated 23 months ago by RamRS26k
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Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 23 months ago by deepti1rao30 • updated 23 months ago by h.mon29k
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Annotating and predicting the genomic region of a sequenced phage
contigs phage blast tail protein written 2.0 years ago by DanielC120 • updated 23 months ago by Biostar ♦♦ 20
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Contig cutoff of 300 bp - why? (Trinity transcriptome assembly)
trinity contigs rna-seq assembly written 2.3 years ago by BioBing100 • updated 2.3 years ago by jwhan.algae10
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Determining a complete genome from contigs
complete genome contigs written 2.4 years ago by Optimist90 • updated 2.3 years ago by ropolocan640
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