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<prev • 104 results • page 1 of 4 • next >
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How to get a consensus of the contigs obtained from an assembler like spades?
consensus spades contigs written 5 days ago by DK • 70
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1
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121
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1
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Contig name in SAM file
contig contigs sam contig name written 6 days ago by maryam.95 • 10 • updated 6 days ago by WouterDeCoster ♦ 35k
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How to decide how many Iontorrent reads to run for contig assembly using Mira assembler?
reads mira assembler iointorrent contigs written 14 days ago by DK • 70 • updated 14 days ago by WouterDeCoster ♦ 35k
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138
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GATK BaseRecalibrator No overlapping contigs found ERROR
reads gatk contigs baserecalibrator written 8 weeks ago by marongiu.luigi • 340 • updated 8 weeks ago by Pierre Lindenbaum ♦ 115k
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Thousands of contigs in E.coli assembly
genome assembly contigs prokka written 3 months ago by vitorgomesbio • 0 • updated 3 months ago by Biostar ♦♦ 20
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2
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241
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Order of contigs
contigs written 3 months ago by agata88 • 760 • updated 3 months ago by piet • 1.6k
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234
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Tool to do Variant calling from contigs data
variant calling contigs written 6 months ago by de.mecquenem.ninon • 10
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288
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SSPACE for scaffolding
contigs sspace insert size bbmap scaffolding written 7 months ago by deepti1rao • 20 • updated 7 months ago by RamRS ♦ 19k
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313
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Continuous alignment of contigs with reference using blast /blat
alignment contigs blat written 7 months ago by deepti1rao • 20 • updated 7 months ago by h.mon ♦ 21k
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Annotating and predicting the genomic region of a sequenced phage
contigs phage blast tail protein written 9 months ago by DK • 70 • updated 8 months ago by Biostar ♦♦ 20
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7 follow
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 11 months ago by fhsantanna • 420
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2
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537
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Contig cutoff of 300 bp - why? (Trinity transcriptome assembly)
trinity contigs rna-seq assembly written 12 months ago by BioBing • 100 • updated 12 months ago by jwhan.algae • 0
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1
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536
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Determining a complete genome from contigs
complete genome contigs written 13 months ago by Optimist • 40 • updated 12 months ago by ropolocan • 490
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Can 167 contigs in my genome be stitched in to one fasta sequence
fasta genome contigs bioinformatics written 16 months ago by Optimist • 40 • updated 16 months ago by Michael Dondrup ♦ 45k
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5 follow
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Merge Scaffolds From Different Individuals?
consensus assembly contigs written 6.3 years ago by Gabriel R. • 2.5k
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473
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Capturing whole gene sequences from WGS metagenomics sample
assembly metagenomics contigs binning written 18 months ago by Lina F • 150 • updated 18 months ago by Sej Modha ♦ 3.9k
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478
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Is there any tool to convert a contig to illumina reads?
assembly contigs illumina written 18 months ago by m.koohi.m • 80
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1
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759
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1
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Difference between read and contig based taxonomic classification
reads classification contigs taxonomic written 18 months ago by BAGeno • 100 • updated 18 months ago by Sej Modha ♦ 3.9k
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Reference guided assembly of contigs
assembly tools bacteria contigs reference written 19 months ago by hman6.2.91 • 0
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5 follow
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How to assemble contigs?
assembly contigs denovo sequencing written 19 months ago by Paul • 70 • updated 19 months ago by vmicrobio • 230
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Split BAM file into parts with headers rebuilt
bam contigs rna-seq split written 19 months ago by viktorfeketa • 0
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718
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5 follow
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How to identify the contigs for each predicted cds sequences?
genome augustus output contigs cds written 20 months ago by mirza • 80 • updated 20 months ago by jrj.healey ♦ 9.1k
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How Can I Increase The Length Of Existing Genome Contigs Using Paired-End Reads?
assembly contigs genomics scaffolding written 5.9 years ago by aswad87 • 0 • updated 22 months ago by Biostar ♦♦ 20
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Can Scaffolds overlap?
radseq contigs scaffolds written 23 months ago by beausoleilmo • 210
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GATK Haplotype Caller
gatk next-gen haplotype contigs caller written 2.1 years ago by plink_9857 • 40 • updated 23 months ago by Biostar ♦♦ 20
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How to determine number of unigenes from conigs (De Novo Assembly developed Trinity)
gene assembly contigs rna-seq unigene written 24 months ago by bilal.sarwar • 0
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543
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Causes of missing genes in de novo assembed resequenced bacteria
genome assembly bacteria contigs written 2.1 years ago by f2369583 • 10
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How to order contigs generated from PlasmidSPAdes
assembly alignment contigs written 2.2 years ago by mandigene94 • 10 • updated 2.1 years ago by Roye Rozov • 90
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Incompatible Contigs Issue In Mitochondria Dna
mitochondria contigs written 5.7 years ago by ckr123 • 10 • updated 2.2 years ago by Biostar ♦♦ 20
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Making a Venn Diagram Using BLAST Results?
metagenomics contigs venn diagram blast written 2.4 years ago by sturne29 • 10 • updated 2.4 years ago by Jean-Karim Heriche ♦ 17k
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