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How to extend contigs from single-end reads?
contigs contig extension single-end reads written 4 months ago by Audrey30 • updated 4 months ago by shelkmike320
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how can I do the assembly of contigs
assembly contigs sequencing written 5 months ago by aline.paula1429120 • updated 5 months ago by hugo.avila180
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how to annotate draft genome
bacteria contigs draft genome written 6 months ago by zhangdengwei130 • updated 6 months ago by andres.firrincieli1.1k
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meaning of CheckM output
contigs checkm genome assembly written 6 months ago by zhangdengwei130 • updated 6 months ago by Asaf8.5k
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How to filter a VCF file with a list of CHR or contig IDs?
vcf chromosome contigs vcftools awk written 7 months ago by acoles10 • updated 7 months ago by drkennetz510
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Mapping using assembled contigs
genome assembly contigs mapping bbmap written 8 months ago by la_ff0 • updated 8 months ago by colindaven2.6k
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Split fasta file into chromosomes
fasta core genome contigs chromosome written 4.9 years ago by natasha100 • updated 9 months ago by Biostar ♦♦ 20
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Removing small contigs from fasta files
perl assembly contigs fasta written 14 months ago by Nyksubuz10 • updated 11 months ago by Bioinfo20
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Assembly size decreased after using SSPACE for scaffolding
sspace contigs assembly size scaffolding written 12 months ago by deepti1rao30 • updated 11 months ago by Biostar ♦♦ 20
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Counting Contigs in Fasta/GBK File
genome contigs checkm written 12 months ago by biohacker_tobe40 • updated 12 months ago by Joe18k
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Convert abyss scaffolds to contigs
contigs abyss written 14 months ago by jm4400 • updated 14 months ago by h.mon32k
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Merge contigs in fasta file
fasta merge contigs written 20 months ago by Rubal330 • updated 20 months ago by finswimmer14k
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Prokka setupdb issue
annotation contigs prokka assembly written 22 months ago by DanielC140
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 3.0 years ago by fhsantanna490 • updated 22 months ago by bhclement0
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Where can I find publicly available metagenomics contig datsets?
metagenomics contigs datasets written 2.0 years ago by vijinim100 • updated 23 months ago by Jonathanjacobs260
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assembly of contigs into scaffolds
assembly contigs scaffolds written 2.1 years ago by M.Nadeem Khan0 • updated 2.1 years ago by shubhra.bhattacharya120
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Is there a standard file format for anchored contigs?
genome assembly linkage map contigs anchor contigs written 2.1 years ago by brogroh0 • updated 2.1 years ago by cmdcolin1.5k
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Contig name in SAM file
contig contigs sam contig name written 2.1 years ago by maryam.9510 • updated 2.1 years ago by WouterDeCoster45k
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