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<prev • 128 results • page 1 of 5 • next >
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How to use genoPlotR if genes reside on multiple contigs
contigs genoplotr written 3 months ago by shakti83kumar • 0
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5 follow
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How to extend contigs from single-end reads?
contigs contig extension single-end reads written 4 months ago by Audrey • 30 • updated 4 months ago by shelkmike • 320
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how can I do the assembly of contigs
assembly contigs sequencing written 5 months ago by aline.paula142912 • 0 • updated 5 months ago by hugo.avila • 180
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269
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how to annotate draft genome
bacteria contigs draft genome written 6 months ago by zhangdengwei • 130 • updated 6 months ago by andres.firrincieli • 1.1k
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meaning of CheckM output
contigs checkm genome assembly written 6 months ago by zhangdengwei • 130 • updated 6 months ago by Asaf ♦ 8.5k
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How to interpret a contig statistics table?
assembly n50 contigs soapdenovo2 wgs written 7 months ago by mrj • 20
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How to filter a VCF file with a list of CHR or contig IDs?
vcf chromosome contigs vcftools awk written 7 months ago by acoles • 10 • updated 7 months ago by drkennetz • 510
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Phyluce unable to recognize Galaxy-assembled .fasta file
contigs .fasta galaxy valueerror phyluce written 7 months ago by kacollier • 0
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Mapping using assembled contigs
genome assembly contigs mapping bbmap written 8 months ago by la_ff • 0 • updated 8 months ago by colindaven • 2.6k
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Split fasta file into chromosomes
fasta core genome contigs chromosome written 4.9 years ago by natasha • 100 • updated 9 months ago by Biostar ♦♦ 20
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Removing small contigs from fasta files
perl assembly contigs fasta written 14 months ago by Nyksubuz • 10 • updated 11 months ago by Bioinfo • 20
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Assembly size decreased after using SSPACE for scaffolding
sspace contigs assembly size scaffolding written 12 months ago by deepti1rao • 30 • updated 11 months ago by Biostar ♦♦ 20
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Annotation of contigs through Genome assembly
genome assembly contigs annotation written 12 months ago by Chikitow • 0
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Counting Contigs in Fasta/GBK File
genome contigs checkm written 12 months ago by biohacker_tobe • 40 • updated 12 months ago by Joe ♦ 18k
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Mapping to contigs or predicted genes, for quantitative gene analysis (DNAseq)
dnaseq fastq alignment contigs map written 14 months ago by allerdrengen55 • 50 • updated 14 months ago by Asaf ♦ 8.5k
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Assemble multiple contigs to single
contigs microbial pacbio genome assembly written 14 months ago by star715 • 20
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Convert abyss scaffolds to contigs
contigs abyss written 14 months ago by jm440 • 0 • updated 14 months ago by h.mon ♦ 32k
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Should I consider contigs.fa or scaffolds.fa from SPAdes output for downstream analyses?
assembly spades quast contigs written 19 months ago by bioinforesearchquestions • 280 • updated 19 months ago by h.mon ♦ 32k
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Merge contigs in fasta file
fasta merge contigs written 20 months ago by Rubal • 330 • updated 20 months ago by finswimmer ♦ 14k
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Prokka setupdb issue
annotation contigs prokka assembly written 22 months ago by DanielC • 140
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Gaps in sequenced DNA consensus generated from contigs
gaps consensus contigs written 22 months ago by DanielC • 140
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Binning Tools for Long Reads/Contigs
long reads metagenomics contigs binning written 22 months ago by vijinim • 100
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Criteria for filtering contigs after spades assembly
assembly spades contigs filtering written 3.0 years ago by fhsantanna • 490 • updated 22 months ago by bhclement • 0
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Where can I find publicly available metagenomics contig datsets?
metagenomics contigs datasets written 2.0 years ago by vijinim • 100 • updated 23 months ago by Jonathanjacobs • 260
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assembly of contigs into scaffolds
assembly contigs scaffolds written 2.1 years ago by M.Nadeem Khan • 0 • updated 2.1 years ago by shubhra.bhattacharya • 120
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Is there a standard file format for anchored contigs?
genome assembly linkage map contigs anchor contigs written 2.1 years ago by brogroh • 0 • updated 2.1 years ago by cmdcolin • 1.5k
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How to get a consensus of the contigs obtained from an assembler like spades?
consensus spades contigs written 2.1 years ago by DanielC • 140
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Contig name in SAM file
contig contigs sam contig name written 2.1 years ago by maryam.95 • 10 • updated 2.1 years ago by WouterDeCoster ♦ 45k
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How to decide how many Iontorrent reads to run for contig assembly using Mira assembler?
reads mira assembler iointorrent contigs written 2.2 years ago by DanielC • 140 • updated 2.2 years ago by WouterDeCoster ♦ 45k
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GATK BaseRecalibrator No overlapping contigs found ERROR
reads gatk contigs baserecalibrator written 2.3 years ago by marongiu.luigi • 520 • updated 2.3 years ago by Pierre Lindenbaum ♦ 133k
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