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<prev • 113 results • page 1 of 4 • next >
5
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2
answers
4.6k
views
2
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Easy Way To Map Cds Coordinates To Genomic Coordinates
cds gff coordinates mapping bed written 9.0 years ago by Alper Yilmaz • 90 • updated 9 weeks ago by Shicheng Guo • 8.1k
0
votes
0
answers
113
views
0
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conversion of genomic variant to coding variant to protein variant
coordinates variant snp conversion written 3 months ago by justinms • 10
0
votes
1
answer
134
views
1
answer
index tabulate file to get chrom, pos, ref, alt
indexing tabix coordinates variants written 3 months ago by damian.loska • 10 • updated 3 months ago by Pierre Lindenbaum ♦ 127k
5
votes
2
answers
445
views
2
answers
Create Chain File for Converting Genome Coordinates
genome assembly coordinates liftover alignment written 8 months ago by Gabriel • 30 • updated 8 months ago by jean.elbers • 1.3k
0
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0
answers
231
views
0
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Retrieve base position/coordinates due to AA position on a protein
base coordinates position aminoacid written 10 months ago by cocchi.e89 • 50
1
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2
answers
277
views
2
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UCSC different exome sets per each gene
gene coordinates exomes ucsc written 10 months ago by cocchi.e89 • 50 • updated 10 months ago by Luis Nassar • 360
1
vote
1
answer
848
views
1
answer
genetic coordinates hg19/GRCh37 latest version
gene grch37 coordinates refseq hg19 written 14 months ago by cocchi.e89 • 50
1
vote
1
answer
2.3k
views
1
answer
Map Uniprot On Genomic Coordinates (Eg. Hg19)
coordinates mapping uniprot written 7.9 years ago by jirivoller • 10 • updated 15 months ago by Biostar ♦♦ 20
17
votes
3
answers
10k
views
6 follow
3
answers
Getting Sequence Based On Chromosome No And Coordinates From Whole Genome Fasta File
sequence coordinates tool written 8.0 years ago by Anurag • 20 • updated 16 months ago by Biostar ♦♦ 20
0
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0
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494
views
0
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How to divide a chromosome into arms and center?
chromsome arm coordinates center bed written 16 months ago by Zee_S • 50
11
votes
4
answers
854
views
10 follow
4
answers
Extracting snps from a range of coordinates
vcf gene coordinates sub-set snp written 18 months ago by S AR • 50 • updated 18 months ago by toralmanvar • 840
19
votes
6
answers
7.4k
views
10 follow
6
answers
How To Extract Just The Coordinate Values From A Pdb File Converted To A Text File, In Java Only?
pdb java coordinates structure parsing written 9.8 years ago by Jeremiahloh • 30 • updated 19 months ago by RamRS ♦ 26k
20
votes
4
answers
12k
views
5 follow
4
answers
How Do I Get The Gene Names From The Chromosome Locations In A Wig File
wiggle galaxy coordinates ucsc written 9.9 years ago by pixie@bioinfo • 1.4k • updated 19 months ago by RamRS ♦ 26k
3
votes
1
answer
508
views
5 follow
1
answer
Get variant position knowing the gene name, base change, and NM#
gene genome coordinates variant written 21 months ago by bisansamara • 10 • updated 21 months ago by Tao • 370
208
votes
0
answers
55k
views
148 follow
0
answers
Tutorial: Cheat Sheet For One-Based Vs Zero-Based Coordinate Systems
tutorial coordinates written 6.4 years ago by Obi Griffith ♦ 18k
0
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0
answers
1.0k
views
0
answers
Retrieve genomic coordinates (locus start, locus end) from blastn hits?
locus coordinates blastn reciprocal best hits written 2.1 years ago by sombrajo92 • 0 • updated 23 months ago by Biostar ♦♦ 20
0
votes
1
answer
801
views
1
answer
Blast subject coordinates
coordinates subject blast written 23 months ago by deepti1rao • 30 • updated 23 months ago by RamRS ♦ 26k
0
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0
answers
543
views
0
answers
fantom5 enhancers GRCh38
fantom5 R enhancers coordinates genomics written 24 months ago by Pin.Bioinf • 270
0
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0
answers
523
views
0
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how to get intergene coordinates for a single chromosome?
bedtools intersect intergene coordinates written 24 months ago by Zee_S • 50
0
votes
1
answer
2.2k
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1
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Finding hg19 coordinates for primers to make BED file
primers coordinates hg19 written 4.3 years ago by adnan.haider.ra • 10 • updated 24 months ago by bioinfo89 • 40
182
votes
1
answer
91k
views
117 follow
1
answer
Tool: Converting Genome Coordinates From One Genome Version To Another (Ucsc Liftover, Ncbi Remap, Ensembl Api)
tool genome conversion coordinates ensembl liftover written 7.1 years ago by Malachi Griffith ♦ 18k
9
votes
6
answers
7.8k
views
10 follow
6
answers
Is There An Easy Way Of Getting Gene Symbols From Genomic Coordinates?
gene coordinates written 6.7 years ago by merajazizmeraj • 20 • updated 2.0 years ago by Roman Valls Guimerà • 530
26
votes
6
answers
14k
views
12 follow
6
answers
Converting Ensembl Gene Ids To Hgnc Gene Name / Coordinates
genome ensembl coordinates mapping ucsc written 8.4 years ago by Ryan D • 3.3k • updated 2.3 years ago by ericrkofman • 10
1
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2
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2.6k
views
2
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Mutation Taster Gdna Coordinates
coordinates mutation written 7.5 years ago by jp.of.mars • 0 • updated 2.5 years ago by Biostar ♦♦ 20
9
votes
1
answer
688
views
7 follow
1
answer
Data Mining from my Genomic Coordinates
vcf ngs coordinates database sql written 2.5 years ago by Paul • 1.4k • updated 2.5 years ago by Kevin Blighe ♦ 56k
36
votes
3
answers
19k
views
10 follow
3
answers
Exon Coordinates Of Hg19 Genome Download
exon coordinates human hg written 9.1 years ago by Neeraj • 150 • updated 2.5 years ago by Biostar ♦♦ 20
2
votes
1
answer
1.0k
views
1
answer
[hg19] Reading genes with CCDS
grch37 coordinates ccds hg19 written 2.6 years ago by mollitz • 40 • updated 2.6 years ago by Satyajeet Khare • 1.5k
2
votes
1
answer
2.3k
views
1
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Can One Use The Ensembl Api To Retrieve Multiple Alignment Between The 46 Vertebrate Species
ensembl alignment coordinates written 7.7 years ago by bingyu19821270 • 40 • updated 2.9 years ago by Biostar ♦♦ 20
21
votes
5
answers
13k
views
9 follow
5
answers
How To Extract Just The Coordinate Values From A Pdb File, Using Perl Only?
pdb perl coordinates protein parsing written 9.0 years ago by Sakshi • 20 • updated 2.9 years ago by Biostar ♦♦ 20
6
votes
1
answer
1.3k
views
5 follow
1
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Construct a gene arrow map to show the gene features
annotation coordinates gene map written 3.0 years ago by utkarsh.sood • 30 • updated 3.0 years ago by Pierre Lindenbaum ♦ 127k
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