Showing: copy numberreset
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Preprocess Illumina Hiseq Exome for ASCAT
genome R next-gen copy number sequencing written 3 months ago by prideda00 • updated 8 weeks ago by Biostar ♦♦ 20
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GISTIC 2.0.23 error
gistic dnacopy copy number written 9 months ago by mkaushal70 • updated 9 weeks ago by iiii_hr0
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Copy number variation using HTSeq/DESeq2
htseq copy number deseq written 12 weeks ago by ThePresident90 • updated 11 weeks ago by WouterDeCoster25k
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I need allele copy number information for running PyClone
wes whole-exome allele copy number written 6 months ago by a010390123870 • updated 4 months ago by Eric T.2.0k
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SNP Array data with 0 copies for a segment
copy number snp cgh written 11 months ago by zucker.6410 • updated 11 months ago by bernatgel950
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Error 1: NULL byte detected when trying to segment by PSCBS
exome cnvkit copy number segment written 11 months ago by nbay130 • updated 11 months ago by Eric T.2.0k
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CNVkit Segments vs Bins
exome cnvkit copy number segment written 11 months ago by Lauren20 • updated 11 months ago by Eric T.2.0k
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Ploidy vs. copy number in Sequenza
depth ratio sequenza copy number ploidy written 15 months ago by wclee470 • updated 15 months ago by favero.francesco120
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What isthe Indication of copy number?
gene copy number dna written 15 months ago by andrew.samy.abdelmalak0 • updated 15 months ago by Devon Ryan76k
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sciClone:input data wrong
dnacopy varscan copy number sciclone cluster written 16 months ago by lyan.liu0 • updated 16 months ago by Chris Miller19k
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Sciclone on exome sequencing data
copy number sciclone exome seq written 23 months ago by chloe.steen120 • updated 17 months ago by Chris Miller19k
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The outputs of GISTIC
gistic copy number cnv written 19 months ago by agicict120 • updated 18 months ago by Biostar ♦♦ 20
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Why does GISTIC require a markers file?
gistic copy number written 20 months ago by Irsan6.5k • updated 19 months ago by neelablore0
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Calling CNA from aCGH: Thresholding?
copy number array cgh written 2.0 years ago by Noushin N490 • updated 2.0 years ago by Eric T.2.0k
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gistic for whole genome sequencing copy number analysis
gistic copy number whole genome sequencing written 2.8 years ago by owen0 • updated 2.8 years ago by Irsan6.5k
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How to find most common copy number changes in cancer
copy number cancer sequencing written 2.9 years ago by sebastianzeki0110 • updated 2.9 years ago by vchris_ngs4.3k
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tumor sample SNP6 copy number calling
cna snp6 tumor copy number snp written 2.9 years ago by Zhenyu160 • updated 2.9 years ago by Pierre Lindenbaum104k
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Copy number (repeat count) of assembled contigs
de novo assembly repeat count copy number contigs written 3.0 years ago by misaghb20 • updated 3.0 years ago by apelin20460
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