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11
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2
answers
5.9k
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8 follow
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Work With Dnacopy (Bioconductor) And Varscan Copynumber Results
varscan bioconductor copynumber written 7.4 years ago by Mdeng510 • updated 14 days ago by noonbobnoon10
1
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1
answer
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1
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Varscan2 copynumber 'Parsing Exception' error
varscan2 copynumber samtools bam whole exome written 2.3 years ago by Vanish00710 • updated 8 weeks ago by jgarces0
0
votes
1
answer
152
views
1
answer
Running cnvkit batch with -y parameter
cnvkit next-gen copynumber sequencing written 3 months ago by alyza0 • updated 3 months ago by Eric T.2.3k
2
votes
1
answer
261
views
1
answer
copy number file format issue
R copynumber cnv python written 5 months ago by jim.paredes0 • updated 5 months ago by cpad011210k
5
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2
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2.8k
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2
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Cbioportal/Tcga Cnv Data
copynumber tcga cnv written 5.1 years ago by RoyC140 • updated 8 months ago by Biostar ♦♦ 20
2
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1
answer
465
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1
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How to use DNAcopy package to analyze Affymetrix SNP array?
R bioconductor copynumber snp cnv written 9 months ago by Shixiang30 • updated 9 months ago by Eric T.2.3k
13
votes
1
answer
906
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9 follow
1
answer
copynumber package in R - basic R question
R copynumber plotfreq data input written 14 months ago by lien90 • updated 13 months ago by cpad011210k
5
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3
answers
2.5k
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7 follow
3
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Cnv Data
copynumber tcga cnv written 4.7 years ago by RoyC140 • updated 15 months ago by smrutimayipanda10
1
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2
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2
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Problems After Loading Varscan 2 Output Into Bioconductor.Dnacopy
exome varscan copynumber cnv sequencing written 5.8 years ago by sousuffer20 • updated 20 months ago by Biostar ♦♦ 20
0
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0
answers
729
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only chrM in the varscan2 copynumber output
copynumber varscan2 chrm written 2.0 years ago by lhaiyan320 • updated 2.0 years ago by WouterDeCoster35k
2
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1
answer
872
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0
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0
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2
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1
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1
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1
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JISTIC. Make Probe location file to compare copy number among samples
dnacopy copynumber jistic written 3.3 years ago by Chirag Nepal2.1k • updated 3.3 years ago by Chris Miller20k
63
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8
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18k
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31 follow
8
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6
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1
answer
4.6k
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1
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Copy number variation plot (R package)
R copynumber cnv plot written 3.4 years ago by lee.jingu062630 • updated 3.4 years ago by QVINTVS_FABIVS_MAXIMVS2.2k
0
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0
answers
1.2k
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0
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Mouse SNP Array Copy Number Profiling
mouse copynumber snp written 3.7 years ago by Noushin N530 • updated 3.4 years ago by Biostar ♦♦ 20
1
vote
1
answer
983
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1
answer
Gene copy number analysis from genome sequences
copynumber analysis written 3.5 years ago by amoltej80 • updated 3.5 years ago by h.mon22k
0
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6
answers
2.7k
views
6 follow
6
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Merging Segments From Varscan2 Output...
exome varscan copynumber cnv sequencing written 5.7 years ago by sousuffer20 • updated 3.8 years ago by lmesrob0
3
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1
answer
6.4k
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1
answer
0
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1
answer
4.2k
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1
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Absolute Copy Number And Relative Copy Number
copynumber written 5.7 years ago by xiguoyuan0 • updated 4.0 years ago by Biostar ♦♦ 20
3
votes
1
answer
1.6k
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1
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Error When Running The Varscan Mergesegments.Pl Tool
exome varscan copynumber cnv sequencing written 5.7 years ago by sousuffer20 • updated 4.0 years ago by Biostar ♦♦ 20
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6
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8.8k
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20 follow
6
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0
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1
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1.8k
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1
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varscan copynumber producing highly variable data
varscan copynumber written 4.4 years ago by ryan.hartmaier0 • updated 4.4 years ago by poisonAlien2.6k
6
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1
answer
2.3k
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1
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3
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1
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1.8k
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1
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Recommended Approach For Copy Number Analysis In Non-Human Organisms
array mouse copynumber somatic written 4.8 years ago by Noushin N530 • updated 4.8 years ago by Stefano Berri4.0k
12
votes
1
answer
5.2k
views
6 follow
1
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How To Use Maf Files In The Absolute Software
maf somatic copynumber mutation tcga written 4.8 years ago by Danielk550 • updated 4.8 years ago by Cyriac Kandoth5.2k
2
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1
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1.0k
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1
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Is There A Correlation Between Copy Number And Tumor Severity ?
copynumber written 4.9 years ago by Cheng Guo30 • updated 4.9 years ago by Irsan6.8k
15
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3
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7.1k
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11 follow
3
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1
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0
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2.0k
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