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htseq-count without GTF?
htseq count fpkm htseq-count gtf written 4 weeks ago by blur140 • updated 4 weeks ago by ATpoint41k
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pysam doesn't calculate correct nucleotide quantities from .bam file
count pysam python written 8 weeks ago by vit.filippo50 • updated 8 weeks ago by dariober11k
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getting 0 counts using hisat2 and feature_count pipeline
count featurecounts rna-seq hisat2 written 10 months ago by bioyas0 • updated 10 months ago by swbarnes29.1k
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RPKM with bowtie output
rpkm rna bowtie count written 13 months ago by flogin250 • updated 12 months ago by anoo0
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jellyfish kmer counting discrepancy
genome count kmer rna-seq jellyfish written 14 months ago by 7ehuang0 • updated 14 months ago by Istvan Albert ♦♦ 85k
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hom/het definition from Allelic Depth counts
ad count variant het hom written 18 months ago by cocchi.e89110 • updated 18 months ago by Vitis2.4k
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CIRCexplorer2: Exon count
rnaseq count circrna diffexp written 2.7 years ago by k.mamoud10 • updated 19 months ago by nedoluzhko0
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Command for counting gene model after each round of MAKER
count gene model maker written 19 months ago by Elizabeth20 • updated 19 months ago by ringourquia20
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Count amino acid in protein sequence in R
count protein R written 21 months ago by boaty110 • updated 21 months ago by zx87549.7k
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best pipeline to get gene and transcript counts
count alignment star rna-seq hisat2 written 2.1 years ago by lkianmehr50 • updated 2.1 years ago by t.blasco9530
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Mutation count in multi-sample vcf file
vcf annotate mutations count written 2.1 years ago by LimMo0 • updated 2.1 years ago by Pierre Lindenbaum131k
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Gene name with its mutations number
gene count tool mutations annotation written 2.2 years ago by LimMo0 • updated 2.2 years ago by Alex Reynolds31k
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Can I determine the machine used for RNA-seq from the .count file extension?
count rna-seq written 2.5 years ago by MarjoryMollusc50 • updated 2.5 years ago by mkulecka320
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GDC - count Matrix data
count gdc rna-seq written 3.0 years ago by David_emir380 • updated 3.0 years ago by svlachavas680
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Retrieving data from NCBI GEO and RNA-Seq Data Analysis
geo R normalization rna-seq count written 3.3 years ago by hkarakurt100 • updated 3.3 years ago by theobroma221.1k
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