Showing: countsreset
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59
votes
10
answers
8.6k
views
16 follow
10
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Counting N'S Within Fasta
fasta perl counts written 6.4 years ago by PoGibas4.7k • updated 3 months ago by Biostar ♦♦ 20
1
vote
0
answers
180
views
0
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Normalization of read counts
read counts written 3 months ago by dllopezr20
1
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3
answers
213
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3
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0
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2
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244
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5 follow
2
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Extracting counts of reads into a matrix
reads grep counts unix written 4 months ago by rmash0 • updated 4 months ago by cpad01128.3k
7
votes
1
answer
501
views
1
answer
Error in extracting Counts from the bam file using htseq-count
htseq bam counts rna-seq written 6 months ago by Biologist70 • updated 6 months ago by h.mon18k
1
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0
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245
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0
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2
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2
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754
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2
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RNAseq: Mapping to ORFs
htseq-count mapping rna-seq counts written 2.0 years ago by chimeric0 • updated 9 months ago by Biostar ♦♦ 20
4
votes
1
answer
637
views
6 follow
1
answer
Raw counts TCGA Firebrowse
tcga counts firebrowse written 10 months ago by Folder40g110 • updated 10 months ago by Kevin Blighe26k
7
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0
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416
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0
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0
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0
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1.1k
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0
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0
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0
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1.8k
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0
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Stranded Paired-End Data With Rsem
next-gen counts written 5.9 years ago by Ge80 • updated 17 months ago by Biostar ♦♦ 20
10
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2
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1.1k
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6 follow
2
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2
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0
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777
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0
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0
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0
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607
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0
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2
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2
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1.0k
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2
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Counts from cuffdiff VS featurecounts
cufflinks counts rna-seq written 22 months ago by marina.v.yurieva470 • updated 22 months ago by geek_y8.7k
1
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0
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870
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0
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8
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2
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909
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2
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Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 24 months ago by camelbbs630 • updated 24 months ago by i.sudbery2.4k
5
votes
1
answer
982
views
1
answer
Summerizing Mapped Reads
normalization counts written 4.5 years ago by HNK110 • updated 2.2 years ago by Biostar ♦♦ 20
8
votes
4
answers
14k
views
13 follow
4
answers
How To Export Normalized Counts From Edger
counts edger written 5.9 years ago by Rm7.7k • updated 2.3 years ago by eduardo.andres.leon0
2
votes
3
answers
6.1k
views
3
answers
Raw Counts From Cufflinks Output
bedtools fpkm cufflinks counts written 5.5 years ago by Ge80 • updated 2.8 years ago by SmallChess460
38
votes
4
answers
36k
views
18 follow
4
answers
Sequence Number Count In Fastq.Gz File
fastq sequence counts written 7.2 years ago by Bioscientist1.6k • updated 2.9 years ago by Biostar ♦♦ 20
20
votes
7
answers
4.5k
views
12 follow
7
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Count 5'End Mapped To A Specific Genomic Position
reads bam counts sam written 5.0 years ago by ifreecell170 • updated 3.1 years ago by Brian Bushnell15k
2
votes
1
answer
1.2k
views
1
answer
When to use FPKM over raw counts or vice-versa?
fpkm counts rna-seq written 3.7 years ago by NHEJ290 • updated 3.7 years ago by Devon Ryan82k
9
votes
2
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3.0k
views
2
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Proper normalization method
normalization counts rna-seq statistics written 3.7 years ago by Cytosine430 • updated 3.7 years ago by Asaf4.8k
43
votes
4
answers
49k
views
10 follow
4
answers
How Do I Count The Number Values Less Than X In A Column Using R ?
R rna counts edger written 7.4 years ago by Jason850 • updated 3.7 years ago by seidel6.5k
0
votes
1
answer
731
views
1
answer
Counting Features metaRNA-seq
rpkm bam counts rna-seq written 3.8 years ago by jbran0 • updated 3.8 years ago by zorbax30
0
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2
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5.9k
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2
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comparing RSEM and counts data
rna-seq rsem counts written 4.2 years ago by Angel200 • updated 4.2 years ago by Charles Warden5.1k
0
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0
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989
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0
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10
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2
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2.6k
views
2
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GTF2/GFF3 "feature" types and expression analysis
gtf bedtools gff counts rna-seq written 4.3 years ago by ndejay30 • updated 4.3 years ago by Devon Ryan82k
3
votes
2
answers
3.8k
views
2
answers
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