Showing: countsreset
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5 follow
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Making a counts
feauturecounts bam counts rna-seq written 13 days ago by Nick0 • updated 13 days ago by h.mon21k
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16 follow
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Counting N'S Within Fasta
fasta perl counts written 6.6 years ago by PoGibas4.7k • updated 6 months ago by Biostar ♦♦ 20
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Normalization of read counts
read counts written 6 months ago by dllopezr40
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305
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3
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0
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301
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5 follow
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Extracting counts of reads into a matrix
reads grep counts unix written 7 months ago by rmash0 • updated 7 months ago by cpad011210k
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1
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Error in extracting Counts from the bam file using htseq-count
htseq bam counts rna-seq written 9 months ago by Biologist90 • updated 9 months ago by h.mon21k
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306
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Problem bam files 0 counts
mapping rna-seq counts written 9 months ago by Pin.Bioinf170
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RNAseq: Mapping to ORFs
htseq-count mapping rna-seq counts written 2.3 years ago by chimeric0 • updated 12 months ago by Biostar ♦♦ 20
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1
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842
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6 follow
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Raw counts TCGA Firebrowse
tcga counts firebrowse written 13 months ago by Folder40g110 • updated 13 months ago by Kevin Blighe32k
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Stranded Paired-End Data With Rsem
next-gen counts written 6.2 years ago by Ge80 • updated 20 months ago by Biostar ♦♦ 20
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6 follow
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663
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Counts from cuffdiff VS featurecounts
cufflinks counts rna-seq written 2.1 years ago by marina.v.yurieva470 • updated 2.1 years ago by geek_y8.8k
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Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 2.2 years ago by camelbbs630 • updated 2.2 years ago by i.sudbery2.7k
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Summerizing Mapped Reads
normalization counts written 4.8 years ago by HNK110 • updated 2.5 years ago by Biostar ♦♦ 20
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4
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13 follow
4
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How To Export Normalized Counts From Edger
counts edger written 6.1 years ago by Rm7.8k • updated 2.6 years ago by eduardo.andres.leon0
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Raw Counts From Cufflinks Output
bedtools fpkm cufflinks counts written 5.8 years ago by Ge80 • updated 3.0 years ago by SmallChess460
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4
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18 follow
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Sequence Number Count In Fastq.Gz File
fastq sequence counts written 7.4 years ago by Bioscientist1.6k • updated 3.2 years ago by Biostar ♦♦ 20
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12 follow
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Count 5'End Mapped To A Specific Genomic Position
reads bam counts sam written 5.2 years ago by ifreecell170 • updated 3.4 years ago by Brian Bushnell16k
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When to use FPKM over raw counts or vice-versa?
fpkm counts rna-seq written 3.9 years ago by NHEJ290 • updated 3.9 years ago by Devon Ryan86k
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Proper normalization method
normalization counts rna-seq statistics written 4.0 years ago by Cytosine430 • updated 4.0 years ago by Asaf5.0k
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4
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10 follow
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How Do I Count The Number Values Less Than X In A Column Using R ?
R rna counts edger written 7.6 years ago by Jason870 • updated 4.0 years ago by seidel6.6k
0
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775
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1
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Counting Features metaRNA-seq
rpkm bam counts rna-seq written 4.1 years ago by jbran0 • updated 4.1 years ago by zorbax30
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comparing RSEM and counts data
rna-seq rsem counts written 4.4 years ago by Angel200 • updated 4.4 years ago by Charles Warden5.6k
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