Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: counts • reset
or   Classic search
<prev • 66 results • page 1 of 3 • next >
1
vote
0
answers
56
views
0
answers
vcftools counts output not written to file
vcf frequency vcftools snp counts written 10 days ago by spider_monkey • 10
2
votes
0
answers
149
views
0
answers
how to compare 2 rna-seq counts with each other by python
counts rna-seq written 8 weeks ago by ali.hakimzadeh • 0
0
votes
0
answers
139
views
0
answers
Low HTseq Feature Counts in Subset of RNA-seq Samples
htseq rnaseq feature counts alignment written 9 weeks ago by kmyers2 • 20
0
votes
0
answers
179
views
0
answers
How to get gene counts with HTseq
reads htseq counts rna-seq written 10 weeks ago by Michel Edwar • 70
2
votes
1
answer
179
views
1
answer
Transform Bedgraph counts into Gene Counts (DESeq2 input)
bedgraph gene counts counts written 3 months ago by LuisNagano • 10 • updated 3 months ago by gocougs • 20
2
votes
0
answers
213
views
0
answers
Is Gene's counts done correctly?
counts rna-seq written 5 months ago by Nick • 0
1
vote
1
answer
383
views
1
answer
What kind of read counts of RNA-seq should be used in machine learning models?
machine learning rna-seq counts written 6 months ago by magicpants • 60
4
votes
1
answer
260
views
5 follow
1
answer
Making a counts
feauturecounts bam counts rna-seq written 6 months ago by Nick • 0 • updated 6 months ago by h.mon ♦ 25k
60
votes
10
answers
10k
views
16 follow
10
answers
Counting N'S Within Fasta
fasta perl counts written 7.1 years ago by PoGibas ♦ 4.8k • updated 12 months ago by Biostar ♦♦ 20
1
vote
0
answers
311
views
0
answers
Normalization of read counts
read counts written 12 months ago by dllopezr • 40
1
vote
3
answers
466
views
3
answers
Question about which option should I choose (reversely stranded or forward stranded)
counts rna-seq sequencing written 13 months ago by kamel • 10 • updated 13 months ago by swbarnes2 ♦ 5.6k
0
votes
2
answers
432
views
5 follow
2
answers
Extracting counts of reads into a matrix
reads grep counts unix written 14 months ago by rmash • 0 • updated 14 months ago by cpad0112 ♦ 11k
7
votes
1
answer
1.1k
views
1
answer
Error in extracting Counts from the bam file using htseq-count
htseq bam counts rna-seq written 15 months ago by Biologist • 150 • updated 15 months ago by h.mon ♦ 25k
1
vote
0
answers
409
views
0
answers
Problem bam files 0 counts
mapping rna-seq counts written 15 months ago by Pin.Bioinf • 240
2
votes
2
answers
937
views
2
answers
RNAseq: Mapping to ORFs
htseq-count mapping rna-seq counts written 2.8 years ago by chimeric • 0 • updated 18 months ago by Biostar ♦♦ 20
4
votes
1
answer
1.3k
views
6 follow
1
answer
Raw counts TCGA Firebrowse
tcga counts firebrowse written 20 months ago by Folder40g • 120 • updated 20 months ago by Kevin Blighe ♦ 42k
7
votes
0
answers
628
views
0
answers
What is the difference between counts and expression level?
R expression level counts rna-seq written 23 months ago by iza08.ik • 20
0
votes
0
answers
2.0k
views
0
answers
Large number of Unassigned_NoFeature reads from featureCounts
unassigned tophat2 featurecounts counts rna-seq written 2.0 years ago by price0416 • 0
0
votes
0
answers
2.0k
views
0
answers
Stranded Paired-End Data With Rsem
next-gen counts written 6.7 years ago by Ge • 80 • updated 2.2 years ago by Biostar ♦♦ 20
10
votes
2
answers
1.5k
views
6 follow
2
answers
HTSeq not counting all the fragments it should count on a gene
htseq gene expression counts rna-seq written 2.4 years ago by Macspider • 2.8k
2
votes
0
answers
1.0k
views
0
answers
Count features of particulair reads in a BAM file
bam counts rna-seq written 2.5 years ago by harmbrugge • 20
0
votes
0
answers
755
views
0
answers
NextSeq/Neoprep Stranded RNA-Seq Count Issue
neoprep rna-seq library counts written 2.6 years ago by bruce.moran • 610
2
votes
2
answers
1.7k
views
2
answers
Counts from cuffdiff VS featurecounts
cufflinks counts rna-seq written 2.6 years ago by marina.v.yurieva • 480 • updated 2.6 years ago by geek_y ♦ 9.6k
1
vote
0
answers
1.1k
views
0
answers
How to identify the miRNA counts column?
bedtools biostat ngs counts mirna written 2.7 years ago by Shahzad • 10
8
votes
2
answers
1.2k
views
2
answers
Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 2.7 years ago by camelbbs • 650 • updated 2.7 years ago by i.sudbery ♦ 4.5k
5
votes
1
answer
1.1k
views
1
answer
Summerizing Mapped Reads
normalization counts written 5.3 years ago by HNK • 120 • updated 3.0 years ago by Biostar ♦♦ 20
9
votes
4
answers
16k
views
13 follow
4
answers
How To Export Normalized Counts From Edger
counts edger written 6.6 years ago by Rm ♦ 7.8k • updated 3.1 years ago by eduardo.andres.leon • 0
2
votes
3
answers
6.4k
views
3
answers
Raw Counts From Cufflinks Output
bedtools fpkm cufflinks counts written 6.3 years ago by Ge • 80 • updated 3.5 years ago by SmallChess • 480
40
votes
4
answers
40k
views
18 follow
4
answers
Sequence Number Count In Fastq.Gz File
fastq sequence counts written 7.9 years ago by Bioscientist • 1.7k • updated 3.7 years ago by Biostar ♦♦ 20
20
votes
7
answers
5.3k
views
12 follow
7
answers
Count 5'End Mapped To A Specific Genomic Position
reads bam counts sam written 5.7 years ago by ifreecell • 170 • updated 3.9 years ago by Brian Bushnell ♦ 16k
<prev • 66 results • page 1 of 3 • next >
Recent Votes
Recent Locations • All »
  • United States, 3 minutes ago
  • United Kingdom, 4 minutes ago
  • Canada, 4 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 976 users visited in the last hour