Showing: countsreset
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59
votes
10
answers
8.2k
views
16 follow
10
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Counting N'S Within Fasta
fasta perl counts written 6.1 years ago by PoGibas4.7k • updated 2 days ago by Biostar ♦♦ 20
1
vote
0
answers
115
views
0
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Normalization of read counts
read counts written 8 days ago by dllopezr10
1
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3
answers
127
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3
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0
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2
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174
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5 follow
2
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Extracting counts of reads into a matrix
reads grep counts unix written 8 weeks ago by rmash0 • updated 8 weeks ago by cpad01125.2k
7
votes
1
answer
324
views
1
answer
Error in extracting Counts from the bam file using htseq-count
htseq bam counts rna-seq written 3 months ago by beginner20 • updated 3 months ago by h.mon14k
1
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0
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192
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0
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2
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2
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678
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2
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RNAseq: Mapping to ORFs
htseq-count mapping rna-seq counts written 21 months ago by chimeric0 • updated 6 months ago by Biostar ♦♦ 20
4
votes
1
answer
431
views
6 follow
1
answer
Raw counts TCGA Firebrowse
tcga counts firebrowse written 7 months ago by runnerbio88110 • updated 7 months ago by Kevin Blighe19k
7
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0
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370
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0
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0
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0
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825
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0
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0
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0
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1.7k
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0
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Stranded Paired-End Data With Rsem
next-gen counts written 5.7 years ago by Ge80 • updated 14 months ago by Biostar ♦♦ 20
10
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2
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899
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6 follow
2
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2
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0
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691
views
0
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0
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0
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547
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0
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2
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2
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888
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2
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Counts from cuffdiff VS featurecounts
cufflinks counts rna-seq written 19 months ago by marina.v.yurieva400 • updated 19 months ago by geek_y8.5k
1
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0
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783
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0
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8
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2
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807
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2
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Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 21 months ago by camelbbs610 • updated 21 months ago by i.sudbery2.1k
5
votes
1
answer
933
views
1
answer
Summerizing Mapped Reads
normalization counts written 4.3 years ago by HNK110 • updated 2.0 years ago by Biostar ♦♦ 20
8
votes
4
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13k
views
13 follow
4
answers
How To Export Normalized Counts From Edger
counts edger written 5.6 years ago by Rm7.6k • updated 2.1 years ago by eduardo.andres.leon0
2
votes
3
answers
5.9k
views
3
answers
Raw Counts From Cufflinks Output
bedtools fpkm cufflinks counts written 5.3 years ago by Ge80 • updated 2.5 years ago by student-t430
38
votes
4
answers
35k
views
18 follow
4
answers
Sequence Number Count In Fastq.Gz File
fastq sequence counts written 6.9 years ago by Bioscientist1.6k • updated 2.7 years ago by Biostar ♦♦ 20
18
votes
7
answers
4.3k
views
12 follow
7
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Count 5'End Mapped To A Specific Genomic Position
reads bam counts sam written 4.7 years ago by ifreecell140 • updated 2.9 years ago by Brian Bushnell15k
2
votes
1
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1.1k
views
1
answer
When to use FPKM over raw counts or vice-versa?
fpkm counts rna-seq written 3.4 years ago by NHEJ260 • updated 3.4 years ago by Devon Ryan79k
9
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2
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2.8k
views
2
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Proper normalization method
normalization counts rna-seq statistics written 3.5 years ago by Cytosine430 • updated 3.5 years ago by Asaf4.8k
43
votes
4
answers
46k
views
10 follow
4
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How Do I Count The Number Values Less Than X In A Column Using R ?
R rna counts edger written 7.1 years ago by Jason840 • updated 3.5 years ago by seidel6.5k
0
votes
1
answer
708
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1
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Counting Features metaRNA-seq
rpkm bam counts rna-seq written 3.6 years ago by jbran0 • updated 3.6 years ago by zorbax30
0
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2
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5.6k
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2
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comparing RSEM and counts data
rna-seq rsem counts written 3.9 years ago by Angel190 • updated 3.9 years ago by Charles Warden5.0k
0
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0
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859
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0
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10
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2
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2.5k
views
2
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GTF2/GFF3 "feature" types and expression analysis
gtf bedtools gff counts rna-seq written 4.1 years ago by ndejay30 • updated 4.1 years ago by Devon Ryan79k
3
votes
2
answers
3.6k
views
2
answers
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