Showing: coveragereset
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41
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How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 3.0 years ago by krithika.gu140 • updated 12 hours ago by bioinfo870
185
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11
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87 follow
11
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Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 6.4 years ago by Biomed4.2k • updated 1 day ago by bioinfo870
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1
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3
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5 follow
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Calculating Mapping Coverage
calculate mapping coverage tool written 3.0 years ago by Hatem Elshazly50 • updated 19 days ago by Brian Bushnell12k
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Tool for BAM coverage without the soft clipping base
softclipping bam coverage written 4 weeks ago by nayshool20 • updated 4 weeks ago by Pierre Lindenbaum95k
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1
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115
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1
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coverage for unique transcript and df process
R coverage data frame written 5 weeks ago by Lila M 280 • updated 5 weeks ago by Rashedul Islam140
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0
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236
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6 follow
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22
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187
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6
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709
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5 follow
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0
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94
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actual coverage vs. macs2
macs2 coverage coveragebed written 9 weeks ago by blur50
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166
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How to extract high coverage region from BAM?
reads ngs bam coverage mapping written 9 weeks ago by BioGeek80 • updated 9 weeks ago by Pierre Lindenbaum95k
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How do I access genome coverage using SPADES?
genome spades coverage myposts written 22 months ago by fhsantanna290 • updated 10 weeks ago by shenwei3563.1k
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200
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3
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214
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search for low coverage regions on bam file
bedtools genomecov coverage awk written 11 weeks ago by mary0 • updated 11 weeks ago by Pierre Lindenbaum95k
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1
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1
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compute coverage with file.bam and bed : bedtools empty output
bedtools bed bam coverage written 12 weeks ago by noeD50 • updated 12 weeks ago by Devon Ryan68k
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1
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135
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1
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How does coverage of all contigs varies?
reads ngs coverage depth written 3 months ago by BioGeek80 • updated 3 months ago by h.mon6.6k
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select -500 from the TSS to +500 after the TES strand +/-
strand sequencing coverage tes tss written 4 months ago by Lila M 280 • updated 4 months ago by Alex Reynolds19k
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183
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3
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338
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understanding contig statistics
assembly mapping reads qualimap coverage spades written 4 months ago by mary0 • updated 4 months ago by Brian Bushnell12k
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9 follow
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Peak Detection In Intergenic Regions In Rna-Seq Data
rna bioconductor peak-calling coverage written 7.0 years ago by Michael Dondrup42k • updated 4 months ago by Charles Warden4.8k
4
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5 follow
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plot coverage for WES data
bam coverage plot written 5 months ago by koala0 • updated 5 months ago by michael.ante1.6k
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280
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Contig's coverage and bam files.
contig coverage bam written 7 months ago by Picasa290 • updated 5 months ago by Biostar ♦♦ 20
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coverage on exons with bedtools genomecov
bedtools exons rna-seq coverage written 6 months ago by guillaume.rbt280 • updated 6 months ago by Jeffin Rockey360
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