Showing: coveragereset
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Judging best assembly
assembly cut off kmer coverage velvet written 22 days ago by deepti1rao0 • updated 16 days ago by Rohit1.3k
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Genome Assembly at low coverage?
assembly coverage written 4 weeks ago by AP80
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Mean coverage in Ion Torrent PGM
ion torrent ngs coverage written 10 weeks ago by Abdul Rafay Khan790 • updated 10 weeks ago by haro220
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How does picard CollectWGSmetrics estimate coverage on Soft-Clipped Reads?
wgs coverage written 10 weeks ago by knagul10 • updated 10 weeks ago by Dan D6.4k
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Calculating gene/exon coverage
coverage written 11 weeks ago by Joshi0 • updated 11 weeks ago by Macspider2.4k
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Tool: mosdepth: fast BAM/CRAM depth calculation for WGS, exome, or targeted sequencing
exome wgs depth coverage tool written 11 weeks ago by brentp22k • updated 11 weeks ago by ATpoint3.5k
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Calculating the gene coverage in StringTie
gene stringtie coverage rna-seq written 9 months ago by sjbasu20 • updated 12 weeks ago by geo.pertea60
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Bedtools coverage adding feature scores
bedtools score coverage written 23 months ago by jaime.alvarez.benayas0 • updated 3 months ago by Alex Reynolds23k
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Median coverage from BAM file
dna-seq coverage written 3 months ago by rmf250 • updated 3 months ago by Alex Reynolds23k
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Excluding reads for Coverage Calculation in given regions
bedtools bam coverage written 3 months ago by finswimmer1.5k • updated 3 months ago by Pierre Lindenbaum106k
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How can I calculate coverage from the base frequencies file?
frequency coverage basefrequency written 4 months ago by SaltedPork70 • updated 4 months ago by cpad01124.5k
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Create mean coverage plot
R ngs coverage sequencing written 5 months ago by Bella_p50
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Physical/Fragment Coverage for Paired-Ends: Read Length
coverage written 5 months ago by QVINTVS_FABIVS_MAXIMVS2.0k • updated 5 months ago by Devon Ryan78k
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Is cnvkit coverage output split into non-overlapping segments?
exome cnvkit coverage written 6 months ago by fbrundu260 • updated 6 months ago by Eric T.2.1k
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Tools To Calculate Average Coverage For A Bam File?
bam coverage sequencing written 7.2 years ago by Biomed4.4k • updated 6 months ago by bioinfo890
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Extracting coverage per base pair
alignment coverage written 6 months ago by Burgenix0 • updated 6 months ago by Samarth Kulshrestha110
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find snp depth and total depth
coverage snp written 8 months ago by paumarc0 • updated 6 months ago by Biostar ♦♦ 20
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MutSig coverage table
wig mutsig coverage written 3.5 years ago by sadiq.saleem.090 • updated 7 months ago by Biostar ♦♦ 20
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Calculating coverage for WGS, WES and RNASeq
wgs sequence coverage wes rna-seq written 7 months ago by Joshi0 • updated 7 months ago by Philipp Bayer5.4k
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