Showing: coveragereset
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counting the number of reads in FASTQ files
next-gen coverage sequencing written 5 days ago by Ric280 • updated 5 days ago by swbarnes27.0k
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Plotting - Coverage Analysyis
R sequencing python coverage plot written 9 days ago by Gene 10 • updated 9 days ago by zx87548.4k
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how to visualize rna-seq coverage track in igv?
normalization bam coverage rna-seq igv written 20 days ago by Zee_S50 • updated 20 days ago by jared.andrews074.0k
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Calculate the area covered more than a certain depth
next-gen coverage bam sequencing written 5 weeks ago by Floydian_slip130 • updated 5 weeks ago by yztxwd170
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Query cover in global alignment
global alignment needleman coverage written 6 weeks ago by el9700410 • updated 6 weeks ago by gb1.2k
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Biopython BLAST: how to include minimum coverage in the parameters?
biopython blast coverage written 8 weeks ago by lea.picard0 • updated 7 weeks ago by Biostar ♦♦ 20
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Samtools Read Coverage At Bp And Call % At Each Base
read samtools coverage written 7.4 years ago by diltsjeri440 • updated 9 weeks ago by ATpoint26k
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Understanding coverage in genome assemblies
assembly coverage blobtools written 3 months ago by yp1950 • updated 3 months ago by h.mon28k
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Predicted Proteins: Mapping Reads to ORFs
assembly mapping prodigal coverage counts written 3 months ago by Longshotx 20 • updated 3 months ago by colindaven1.8k
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Draw coverage plot from bed file
deeptools coverage bed file written 3 months ago by ben.kunfang10 • updated 3 months ago by Alex Reynolds29k
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Genome coverage within specified regions
bedtools genomecov coverage written 3 months ago by ilovesuperheroes19930 • updated 3 months ago by ATpoint26k
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Export Coverage on IGV
igv coverage sequencing written 4 months ago by callieboskin0 • updated 4 months ago by trausch1.4k
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what is the best way to calculate significant differences in tss profiles?
differences coverage tss written 8 months ago by Lila M 800 • updated 5 months ago by Biostar ♦♦ 20
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Comparing And Plotting Coverage Between Two Bam Files
genome bam coverage chromosome written 7.5 years ago by Rubal7770 • updated 6 months ago by john.e.major.jr0
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CollectHsMetrics base coverage output has overlapping targets
picard coverage written 8 months ago by blazer913110 • updated 6 months ago by Biostar ♦♦ 20
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MutSig coverage table
wig mutsig coverage written 5.1 years ago by sadiq.saleem.0910
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Coverage Calculation
next-gen coverage written 7.0 years ago by Raygozak1.3k • updated 7 months ago by Biostar ♦♦ 20
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Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 4.7 years ago by Matt Corley40 • updated 7 months ago by Biostar ♦♦ 20
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Depth of coverage of Bed file regions?
bedtools bed coverage genome written 8 months ago by Jon1710 • updated 8 months ago by h.mon28k
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TDF Coverage in Figure
igv rna-seq coverage tdf m6a written 8 months ago by Charles Warden7.4k
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Median coverage from BAM file
dna-seq coverage written 22 months ago by rmf750
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