Showing: coveragereset
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How to extract high coverage region from BAM?
reads ngs bam coverage mapping written 9 days ago by BioGeek60 • updated 9 days ago by Pierre Lindenbaum92k
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How do I access genome coverage using SPADES?
genome spades coverage myposts written 20 months ago by fhsantanna270 • updated 17 days ago by shenwei3562.8k
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search for low coverage regions on bam file
bedtools genomecov coverage awk written 17 days ago by mary0 • updated 17 days ago by Pierre Lindenbaum92k
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compute coverage with file.bam and bed : bedtools empty output
bedtools bed bam coverage written 27 days ago by noeD50 • updated 27 days ago by Devon Ryan64k
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How does coverage of all contigs varies?
reads ngs coverage depth written 4 weeks ago by BioGeek60 • updated 4 weeks ago by h.mon5.4k
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select -500 from the TSS to +500 after the TES strand +/-
strand sequencing coverage tes tss written 9 weeks ago by Lila M 230 • updated 9 weeks ago by Alex Reynolds18k
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understanding contig statistics
assembly mapping reads qualimap coverage spades written 10 weeks ago by mary0 • updated 9 weeks ago by Brian Bushnell10k
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Peak Detection In Intergenic Regions In Rna-Seq Data
rna bioconductor peak-calling coverage written 6.9 years ago by Michael Dondrup41k • updated 11 weeks ago by Charles Warden4.7k
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plot coverage for WES data
bam coverage plot written 3 months ago by koala0 • updated 3 months ago by michael.ante1.6k
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Contig's coverage and bam files.
contig coverage bam written 5 months ago by Picasa270 • updated 3 months ago by Biostar ♦♦ 10
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coverage on exons with bedtools genomecov
bedtools exons rna-seq coverage written 4 months ago by guillaume.rbt220 • updated 4 months ago by Jeffin Rockey270
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Differentiate "no coverage regions" in bedtools
bedtools ngs coverage split written 4 months ago by BioGeek60 • updated 4 months ago by Charles Plessy1.6k
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How To Filter Vcf By Coverage?
vcf coverage written 3.1 years ago by newDNASeqer540 • updated 4 months ago by Biostar ♦♦ 10
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What is the coverage when allele frequency is < 1?
ngs next-gen coverage sequencing written 5 months ago by izaak.coleman130 • updated 5 months ago by Chris Miller18k
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How do people know to use at least 30X coverage in WGS?
wgs coverage sequencing written 6 months ago by Helene340 • updated 5 months ago by Brian Bushnell10k
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[solved]bedtools coverageBed: not sorted output
next-gen coverage written 15 months ago by Chico Fernandez40 • updated 6 months ago by aiirtime0
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