Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: coverage • reset
or   Classic search
<prev • 320 results • page 1 of 11 • next >
2
votes
0
answers
182
views
0
answers
Understanding coverage in genome assemblies
assembly coverage blobtools written 5 days ago by yp19 • 30 • updated 3 days ago by h.mon ♦ 27k
0
votes
1
answer
84
views
1
answer
Predicted Proteins: Mapping Reads to ORFs
assembly mapping prodigal coverage counts written 11 days ago by infenit101 • 20 • updated 9 days ago by colindaven • 1.6k
2
votes
1
answer
123
views
1
answer
Draw coverage plot from bed file
deeptools coverage bed file written 13 days ago by ben.kunfang • 10 • updated 13 days ago by Alex Reynolds ♦ 28k
1
vote
1
answer
78
views
1
answer
Genome coverage within specified regions
bedtools genomecov coverage written 22 days ago by ilovesuperheroes1993 • 0 • updated 22 days ago by ATpoint ♦ 21k
1
vote
1
answer
84
views
1
answer
Calculating effective coverage/callable genome for variant calling from a bam file
genome variant-calling bam bigwig coverage written 22 days ago by Rubal • 240 • updated 22 days ago by Pierre Lindenbaum ♦ 122k
2
votes
3
answers
177
views
5 follow
3
answers
Export Coverage on IGV
igv coverage sequencing written 7 weeks ago by callieboskin • 0 • updated 7 weeks ago by trausch • 1.4k
0
votes
0
answers
114
views
0
answers
Coverage table and exons
coverage database mysql ngs exons written 11 weeks ago by Swimming bird • 10
5
votes
1
answer
205
views
1
answer
what is the best way to calculate significant differences in tss profiles?
differences coverage tss written 5 months ago by Lila M • 790 • updated 12 weeks ago by Biostar ♦♦ 20
3
votes
1
answer
162
views
1
answer
Comparing metrics of two exome: how to interpret higher median coverage but lower mean target coverage?
exome median metrics coverage mean written 3 months ago by pegeot.henri • 0 • updated 3 months ago by trausch • 1.4k
15
votes
4
answers
6.6k
views
14 follow
4
answers
bedtools coverage gives error received illegal bin number, but that number isn't in my data!
bedtools bin chip-seq coverage error written 2.5 years ago by tara.alpert • 30 • updated 3 months ago by iqra • 0
12
votes
5
answers
9.2k
views
12 follow
5
answers
Comparing And Plotting Coverage Between Two Bam Files
genome bam coverage chromosome written 7.2 years ago by Rubal7 • 760 • updated 3 months ago by john.e.major.jr • 0
1
vote
0
answers
198
views
0
answers
CollectHsMetrics base coverage output has overlapping targets
picard coverage written 5 months ago by blazer9131 • 10 • updated 3 months ago by Biostar ♦♦ 20
2
votes
1
answer
2.3k
views
1
answer
MutSig coverage table
wig mutsig coverage written 4.8 years ago by sadiq.saleem.09 • 10
15
votes
1
answer
9.4k
views
1
answer
Coverage Calculation
next-gen coverage written 6.8 years ago by Raygozak • 1.3k • updated 4 months ago by Biostar ♦♦ 20
5
votes
2
answers
1.7k
views
2
answers
Generating a bedgraph from a scored bed file
genome bedtools chip-seq coverage bedgraph written 4.4 years ago by Matt Corley • 40 • updated 4 months ago by Biostar ♦♦ 20
0
votes
0
answers
207
views
0
answers
Depth of coverage of Bed file regions?
bedtools bed coverage genome written 5 months ago by Jon17 • 10 • updated 5 months ago by h.mon ♦ 27k
5
votes
1
answer
253
views
7 follow
1
answer
Extract coverage from each nucleotide position of a genome in a bam file
bed bam coverage written 5 months ago by MAPK • 1.4k
1
vote
0
answers
212
views
0
answers
TDF Coverage in Figure
igv rna-seq coverage tdf m6a written 5 months ago by Charles Warden ♦ 7.2k
2
votes
2
answers
1.4k
views
6 follow
2
answers
Median coverage from BAM file
dna-seq coverage written 19 months ago by rmf • 700
5
votes
0
answers
218
views
0
answers
How to calculate read depth for a specific gene list?
readdepth interesct coverage written 6 months ago by Lila M • 790
2
votes
0
answers
173
views
0
answers
how to plot a TSS profile using an external quantification for Watson and Crick strand
ggplot ratio coverage tss written 6 months ago by Lila M • 790
5
votes
1
answer
224
views
1
answer
Efficent Estimation of Sequencing Coverage
samtools coverage written 6 months ago by dario.garvan • 460 • updated 6 months ago by harold.smith.tarheel • 4.4k
15
votes
1
answer
428
views
1
answer
error while reading bigwig files in computeMatrix (deeptools)
deeptools bigwig coverage computematrix written 6 months ago by Lila M • 790 • updated 6 months ago by Devon Ryan ♦ 91k
1
vote
0
answers
427
views
0
answers
What coverage is recommended for amplicon sequencing?
amplicon coverage written 7 months ago by Picasa • 460
0
votes
1
answer
259
views
1
answer
How to conclude in a significant decrease of coverage depth
genome alignment next-gen samtools coverage written 7 months ago by maxime.policarpo • 80 • updated 7 months ago by Ahill • 1.6k
0
votes
1
answer
257
views
1
answer
Lower Assembly Quality Despite Higher Coverage?
genome assembly next-gen coverage alignment written 7 months ago by GTR • 0 • updated 7 months ago by h.mon ♦ 27k
9
votes
2
answers
277
views
2
answers
What would be the expected average coverage of a 384 multiplexed run on a Novaseq S4 flowcell?
novaseq coverage written 8 months ago by Biomed ♦ 4.5k • updated 8 months ago by ATpoint ♦ 21k
4
votes
1
answer
931
views
1
answer
Giga base or Giga byte
gb assembly coverage written 12 months ago by Shawrob400 • 10 • updated 8 months ago by ATpoint ♦ 21k
5
votes
1
answer
318
views
1
answer
Finding out which genes are covered the most
genes coverage written 9 months ago by shubhra.bhattacharya • 120 • updated 9 months ago by Pierre Lindenbaum ♦ 122k
0
votes
0
answers
288
views
0
answers
Is is possible to find "SureSelectXT Human Methyl-Seq Capture Library" somewhere?
methyl-seq capture library ssmethylseq coverage written 10 months ago by daisy.ko • 30 • updated 9 months ago by Biostar ♦♦ 20
<prev • 320 results • page 1 of 11 • next >
Recent Votes
Recent Locations • All »
  • EMBL Heidelberg / de.NBI, just now
  • Denmark, Copenhagen, UCPH, 2 minutes ago
  • Spain, 5 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1824 users visited in the last hour