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15
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3
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560
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7 follow
3
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3
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1
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Issue With CRAM -> BAM -> FASTQ Conversion
samtools fastq bam cram view written 7 months ago by denis.k10 • updated 7 months ago by jkbonfield340
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321
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0
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2
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1
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724
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1
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CRAM reference registry and the GRch38 reference genome
cram bam samtools variantcalling grch38 written 14 months ago by Mehulsharma.25310 • updated 14 months ago by h.mon29k
2
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0
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1.3k
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0
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samtools fastq compression
samtools fastq cram written 17 months ago by bsmith030465150
5
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1
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2.7k
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6 follow
1
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How to convert fastq to cram, and from cram back to fastq
fastq cram written 18 months ago by Niek De Klein2.5k • updated 18 months ago by finswimmer13k
1
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482
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cram.cip format ???
cram alignment file_format sequencing written 19 months ago by 2nelly170
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520
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657
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0
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1.2k
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Specify reference to samtools index
samtools cram written 2.2 years ago by mkher50
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2
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3.0k
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6 follow
2
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BAM to CRAM to BAM
bam cram written 2.6 years ago by ElUretsky20 • updated 2.6 years ago by James Bonfield130
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2
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1.9k
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5 follow
2
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Is samtools' compression of bam to cram lossless?
samtools cram written 2.9 years ago by bjarki.sigurjons10 • updated 2.8 years ago by James Bonfield130
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1.3k
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0
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CRAM conversion to .BAM or FastQ not working
bam cram written 3.4 years ago by always_learning1.0k • updated 3.4 years ago by Devon Ryan94k
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1
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1.3k
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1
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cramtools Java NoClassDefFoundError
cram cramtools written 3.7 years ago by ttom210
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2.1k
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small CRAM file to test
cram cramtools written 3.9 years ago by lien90
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2.3k
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1
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2
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3
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2.3k
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Reading CRAM files in pysam
python htslib samtools pysam cram written 4.2 years ago by QVINTVS_FABIVS_MAXIMVS2.3k • updated 4.2 years ago by duxan50
1
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1
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1.6k
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tools using CRAM format?
cram written 4.5 years ago by Richard570 • updated 4.5 years ago by Pierre Lindenbaum126k
1
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1
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1.6k
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1
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cramtools without internet access
cram bam cramtools written 4.8 years ago by evansjo10 • updated 4.8 years ago by Pierre Lindenbaum126k
201
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7
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20k
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39 follow
7
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115
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5
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23k
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27 follow
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Why are we still using Bam files? And not Cram, HDF5 or improved Bam files?
bam cram io hdf written 5.6 years ago by WilliamS310 • updated 5.5 years ago by Pavel Senin1.9k
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1.3k
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