Showing: cufflinksreset
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How does Cufflinks DE calculate q-value?
cufflinks de rna-seq test statistic written 4 months ago by john.perish0 • updated 21 days ago by kristoffer.vittingseerup460
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CummeRbund Column Name Mismatch Error
cummerbund cufflinks cuffdiff bioconductor rna-seq written 5 weeks ago by bryce.kirby0 • updated 4 weeks ago by Chaozhong Liu40
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1
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175
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Using Cufflinks for Novel Transcripts
cufflinks rna-seq written 8 weeks ago by Ron720 • updated 8 weeks ago by seidel6.5k
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145
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6
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Analyzing RNA-seq without replicates
cufflinks isoem2 deseq2 isode2 rna-seq written 10 weeks ago by shawn.w.foley70 • updated 10 weeks ago by i.sudbery1.9k
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Advice : Building Transcript Models Using Cufflinks
cufflinks rna-seq transcriptome written 5.9 years ago by Abhi1.4k • updated 10 weeks ago by Biostar ♦♦ 20
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172
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165
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7
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Cuffdiff input error
cufflinks cuffdiff rna-seq written 3.8 years ago by ljohanam20 • updated 12 weeks ago by Ram14k
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177
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Cufflinks gives only CUFF names with a gtf.
cufflinks rna-seq hisat2 written 3 months ago by hkarakurt10 • updated 3 months ago by Macspider2.4k
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Cuffcompare on the merged GTF file produced by Stringtie
stringtie cufflinks cuffdiff splicing written 13 months ago by seta960 • updated 3 months ago by Biostar ♦♦ 20
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324
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Calculate TPM from cuffnorm count data
fpkm cufflinks tpm cuffnorm rna-seq written 3 months ago by galozs20 • updated 3 months ago by Macspider2.4k
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Cufflinks Or Alternative From Bwa Alignments?
cufflinks bwa written 6.0 years ago by Biostar User350 • updated 3 months ago by Biostar ♦♦ 20
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How to identify and count multi-exon genes
cufflinks multi-exon written 4 months ago by mail2steff30 • updated 4 months ago by EagleEye5.0k
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Cufflinks : Analysis Comparison With And Without A Gtf Reference File
fpkm cufflinks rna written 6.9 years ago by Hélène90 • updated 4 months ago by Biostar ♦♦ 20
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272
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How to get an XS field in SAM with unstranded data ?
cufflinks alignment rna-seq written 4 months ago by corend30 • updated 4 months ago by Friederike1.3k
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Cummerbund Isn'T Managing Cuffdiff Database
cummerbund cufflinks cuffdiff written 6.0 years ago by caworms20 • updated 4 months ago by Fabio Marroni1.8k
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299
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0
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Cufflinks gffread utility
gff cufflinks reverse complement gffread written 23 months ago by Thomas90 • updated 5 months ago by Kevin Blighe17k
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cummeRbund grouping by TSS / CDS / Isoforms
cummerbund cufflinks rna-seq written 6 months ago by corend30 • updated 6 months ago by kristoffer.vittingseerup460
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283
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