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<prev • 227 results • page 1 of 8 • next >
5
votes
1
answer
85
views
1
answer
secondaryFiles where nameroot differs
cwl written 6 days ago by Peter vH • 130 • updated 6 days ago by Michael R. Crusoe • 1.7k
2
votes
1
answer
76
views
1
answer
Missing CWL files in a Directory when passed as input
cwl written 14 days ago by asha • 10 • updated 11 days ago by Tom • 500
2
votes
0
answers
184
views
0
answers
Job: Seeking bioinformaticians and data engineers for product research study
aws cwl workflows rna-seq job written 12 days ago by duminda.aluthgamage • 20
2
votes
1
answer
512
views
1
answer
cwl: unrecognized extension field, $schemas section
cwl written 20 months ago by ninsch3000 • 10 • updated 13 days ago by Biostar ♦♦ 20
12
votes
1
answer
163
views
5 follow
1
answer
Input specific output filenames
cwl rna-seq written 16 days ago by nmaki • 30 • updated 15 days ago by Tom • 500
4
votes
2
answers
189
views
2
answers
how do I default to /dev/null in CommandLineTool
cwl written 19 days ago by Azat Badretdin • 0 • updated 17 days ago by Michael R. Crusoe • 1.7k
7
votes
3
answers
255
views
3
answers
Is there a schema for CWL inputs/job files?
cwl written 3 months ago by karl.sebby • 70
2
votes
0
answers
84
views
0
answers
common workflow language
cwl written 24 days ago by kalwad.piyusha7 • 0
3
votes
1
answer
144
views
1
answer
Change execution directory before running a tool (CWL)
cwl written 5 weeks ago by andreas.bleuler • 20 • updated 5 weeks ago by Tom • 500
2
votes
1
answer
143
views
1
answer
Save CURL output to file
cwl written 6 weeks ago by amnoyman • 0 • updated 5 weeks ago by inutano • 30
6
votes
3
answers
301
views
3
answers
Parse CWL to graph data structure or database?
neo4j cwl written 12 weeks ago by mcpherson • 40
3
votes
2
answers
139
views
2
answers
More examples of parser_v1.0.py usage?
python cwl parser written 8 weeks ago by mcpherson • 40
9
votes
2
answers
152
views
2
answers
Add an item from input to an output array in CWL
cwl written 8 weeks ago by drkennetz • 410 • updated 6 weeks ago by Michael R. Crusoe • 1.7k
3
votes
2
answers
120
views
2
answers
CWL: Array of strings in workflow
cwl written 8 weeks ago by mkher • 50
0
votes
1
answer
129
views
1
answer
Strict validation for input and inputBinding values with same position?
cwl validation written 7 weeks ago by brunodepaulak • 0 • updated 7 weeks ago by Tom • 500
1
vote
1
answer
122
views
1
answer
cwl glob all the output files in a directory
cwl written 8 weeks ago by lizhichao • 80 • updated 8 weeks ago by Michael R. Crusoe • 1.7k
6
votes
2
answers
299
views
2
answers
samtools sort: failed to create temporary file: No space left on device
samtools cwl written 10 weeks ago by lizhichao • 80 • updated 10 weeks ago by ATpoint ♦ 23k
2
votes
1
answer
166
views
1
answer
cwl: Source 'outputtbi' of type ["null", "File"] may be incompatible
cwl written 10 weeks ago by lizhichao • 80
1
vote
1
answer
151
views
1
answer
How can I Write the workflow including too much inputs params
cwl written 10 weeks ago by lizhichao • 80
2
votes
2
answers
150
views
2
answers
cwl: Multiple matches for output item that is a single file
cwl written 11 weeks ago by lizhichao • 80
1
vote
2
answers
142
views
2
answers
CWL : output file refer to inputs param
cwl written 11 weeks ago by lizhichao • 80
1
vote
0
answers
145
views
0
answers
cwltool "invalid field" error messages
cwltool cwl written 11 weeks ago by Tom • 500
0
votes
1
answer
158
views
1
answer
How to import environment variables from the system running it (like Ubuntu) to CWL?
cwl written 11 weeks ago by yuhangr2 • 0 • updated 11 weeks ago by Tom • 500
0
votes
1
answer
160
views
1
answer
toil-cwl-runner on slurm: toil.batchSystems.singleMachine maxMemory limit?
toil slurm cwl singularity written 12 weeks ago by alanh • 60 • updated 12 weeks ago by Michael R. Crusoe • 1.7k
0
votes
1
answer
180
views
1
answer
Rename file in CWL ExpressionTool?
file management cwl written 3 months ago by alanh • 60 • updated 3 months ago by Michael R. Crusoe • 1.7k
8
votes
1
answer
263
views
1
answer
CWL :Append the ref input used in toolkit
cwl written 3 months ago by lizhichao • 80 • updated 3 months ago by Michael R. Crusoe • 1.7k
7
votes
1
answer
211
views
1
answer
Perform one basecommand fot multiple files and get output for each file in CWL
cwl workflow pipeline written 3 months ago by mariafirulevabio • 40 • updated 3 months ago by Tom • 500
4
votes
1
answer
270
views
1
answer
CWL docker command user
cwl-runner cwl docker written 3 months ago by dganiewich • 90 • updated 3 months ago by Tom • 500
0
votes
0
answers
239
views
0
answers
bedtools sort -faidx in CWL
bedtools cwl sort written 3 months ago by dami • 0
5
votes
0
answers
207
views
0
answers
interesting behavior with grep
cwl written 3 months ago by ionox0 • 360
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