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<prev • 163 results • page 1 of 6 • next >
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CWL to check the output directory and run for non-existing files
next-gen cwl rna-seq written 7 hours ago by a.james • 120
1
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3
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721
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3
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cwl for h3abionet16s pipeline failing with non-docker option
cwl written 23 months ago by Shakuntala Baichoo • 0 • updated 1 day ago by Biostar ♦♦ 20
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1
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130
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1
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CWL: How to return int or string[] from CommandLineTool?
cwl written 12 days ago by uagrif • 10 • updated 7 days ago by Michael R. Crusoe • 1.1k
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187
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Did not find output file with glob pattern: for creating runtime output directory in CWL
cwl written 18 days ago by a.james • 120
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2
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150
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2
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cwltool issue using SoftwareRequirement
cwltool cwl tool written 22 days ago by sf21 • 10
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2
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143
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2
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best practice for renaming file in CWL workflow
cwl written 4 weeks ago by ionox0 • 240 • updated 23 days ago by Michael R. Crusoe • 1.1k
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1
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132
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1
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size considerations CWL Toil workflow step inputs
toil cwl written 25 days ago by ionox0 • 240
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1
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173
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1
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toil stats under-reporting memory usage?
toil cwl written 29 days ago by ionox0 • 240
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1
answer
127
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1
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possible to show job names in toil stats command using cwl workflow
toil cwl written 5 weeks ago by ionox0 • 240 • updated 5 weeks ago by Michael R. Crusoe • 1.1k
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1
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119
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1
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Bottleneck for scattered subworkflows
toil cwl written 7 weeks ago by ionox0 • 240 • updated 7 weeks ago by Carlos Borroto • 1.8k
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1
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204
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1
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Possible to combine inputs using valueFrom for scatter
cwl written 10 weeks ago by ionox0 • 240 • updated 9 weeks ago by Michael R. Crusoe • 1.1k
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0
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169
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0
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CWL Error Empty Scatter
cwl workflow pipeline scatter written 10 weeks ago by HL • 0
0
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1
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156
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1
answer
Purpose of secondaryFiles in InputParameter and CommandInputParameter
cwl written 11 weeks ago by wolfganggerlach1981 • 50
2
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1
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192
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1
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Rules regarding secondaryFiles in subworkflows
cwl written 3 months ago by ionox0 • 240 • updated 3 months ago by bogdan.gavrilovic • 170
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1
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261
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1
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scatter over optional argument
cwl written 4 months ago by ionox0 • 240 • updated 3 months ago by bogdan.gavrilovic • 170
2
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1
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177
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1
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Are CWL CommandLineTool arguments guaranteed to be contiguous?
cwl written 3 months ago by jh36 • 0 • updated 3 months ago by drkennetz • 360
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1
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254
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5 follow
1
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change temp folder in cwl
commonworkflowlanguage cwl written 4 months ago by roalva1 • 80 • updated 3 months ago by stian • 0
2
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3
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363
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3
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CWL: Getting output file of a CommandLineTool using glob
common workflow language cwl written 3 months ago by skanwal • 20 • updated 3 months ago by inutano • 10
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2
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299
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6 follow
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CWL Workflow renaming outputs
cwl written 4 months ago by giacomo.tag • 10 • updated 4 months ago by drkennetz • 360
2
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3
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223
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3
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[cwl] referencing to list of paths in an array of files or direcories
cwl written 4 months ago by grange • 0
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1
answer
229
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5 follow
1
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Is there a way to set a basename for an output Directory?
cwl written 4 months ago by ionox0 • 240
3
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1
answer
389
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1
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Workflow Error - "list indices must be integers, not str"
cwl written 4 months ago by ttom • 200
1
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1
answer
184
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1
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How to set default elements of a record?
cwl written 4 months ago by biokcb • 160 • updated 4 months ago by bogdan.gavrilovic • 170
0
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1
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184
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1
answer
Is there a way to convert ["null", File] to File in CWL?
cwl written 4 months ago by azat1b • 0 • updated 4 months ago by bogdan.gavrilovic • 170
3
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1
answer
296
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1
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How does cwltool actually check file formats?
cwl written 4 months ago by biokcb • 160 • updated 4 months ago by Michael R. Crusoe • 1.1k
2
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1
answer
204
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1
answer
InitialWorkDirRequirement copies or symlinks files?
cwl written 4 months ago by ionox0 • 240
3
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1
answer
239
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1
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Input type array and Output type file, possible in CWL ?
cwl written 4 months ago by ttom • 200
3
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1
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443
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1
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CWL passing secondary files in a workflow
cwl written 4 months ago by ttom • 200 • updated 4 months ago by biokcb • 160
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2
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272
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2
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String editing for output file name
cwl written 4 months ago by ttom • 200
0
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1
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404
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1
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scatter method between two steps CWL
scatter cwl written 7 months ago by djarecka • 0 • updated 4 months ago by biokcb • 160
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