Showing: cwlreset
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26
votes
5
answers
4.3k
views
8 follow
5
answers
Minimal CWL (Common Workflow Language) workflow from Makefile
cwl makefile written 3.9 years ago by Pierre Lindenbaum120k • updated 3.7 years ago by sahiilseth30
17
votes
2
answers
792
views
7 follow
2
answers
Workflows! Where is the code?
cwl workflows wdl written 13 months ago by syntax30 • updated 12 months ago by Michael R. Crusoe1.5k
12
votes
1
answer
2.4k
views
6 follow
1
answer
CWL: reading files within an expressionTool
common-workflow-language cwl javascript written 2.5 years ago by karl.nordstrom90 • updated 2.5 years ago by alaindomissy160
9
votes
2
answers
723
views
6 follow
2
answers
Advice on rendering a config file
cwl initialworkdirrequirement written 2.5 years ago by psaffrey20 • updated 2.5 years ago by Michael R. Crusoe1.5k
2
votes
2
answers
629
views
6 follow
2
answers
CWL Workflow renaming outputs
cwl written 11 months ago by giacomo.tag10 • updated 11 months ago by drkennetz370
7
votes
1
answer
1.2k
views
5 follow
1
answer
Simple(?) workflow, can't sort out what output goes where
cwl written 2.6 years ago by starkruzr20 • updated 2.1 years ago by Biostar ♦♦ 20
9
votes
2
answers
2.3k
views
5 follow
2
answers
CWL: How do I use pipes?
cwl written 2.5 years ago by mkher30 • updated 2.4 years ago by karl.sebby70
8
votes
1
answer
862
views
5 follow
1
answer
CWL rerunning completed output
common workflow language cwl written 21 months ago by bruce.moran620 • updated 21 months ago by well30970
5
votes
2
answers
999
views
5 follow
2
answers
Is there a good way to test CWL tools and workflows?
cwl written 14 months ago by Carlos Borroto1.8k • updated 12 months ago by ionox0370
17
votes
2
answers
800
views
5 follow
2
answers
CommandLineTool doesn't finish
cwl written 12 months ago by Tom250 • updated 12 months ago by drkennetz370
2
votes
1
answer
527
views
5 follow
1
answer
change temp folder in cwl
commonworkflowlanguage cwl written 11 months ago by roalva180 • updated 10 months ago by stian10
1
vote
1
answer
332
views
5 follow
1
answer
7
votes
2
answers
489
views
5 follow
2
answers
best practice for renaming file in CWL workflow
cwl written 8 months ago by ionox0370 • updated 7 months ago by Michael R. Crusoe1.5k
3
votes
1
answer
1.2k
views
1
answer
cwltool SGE support for CWL parallel tasks
toil cwl sge written 2.1 years ago by Stefano Berri4.1k • updated 23 months ago by Biostar ♦♦ 20
7
votes
1
answer
1.3k
views
1
answer
CWL: word counting
common workflow language cwl written 24 months ago by gultagr10 • updated 20 months ago by Michael R. Crusoe1.5k
3
votes
3
answers
1.5k
views
3
answers
CWL: default values for custom types in a workflow
cwl written 24 months ago by thomas.e100 • updated 23 months ago by Sl.aleksandr2810
5
votes
2
answers
753
views
2
answers
4
votes
3
answers
889
views
3
answers
Converting stdout (File) to string
cwl written 19 months ago by eduardo10 • updated 19 months ago by Michael R. Crusoe1.5k
2
votes
1
answer
700
views
1
answer
Output files in the input directory
cwl written 18 months ago by thomas.e100 • updated 18 months ago by Michael R. Crusoe1.5k
5
votes
2
answers
416
views
2
answers
String concatenation for output
cwl written 12 months ago by ttom210 • updated 12 months ago by drkennetz370
6
votes
2
answers
436
views
2
answers
String editing for output file name
cwl written 12 months ago by ttom210
1
vote
1
answer
345
views
1
answer
Is there a way to convert ["null", File] to File in CWL?
cwl written 11 months ago by azat1b0 • updated 11 months ago by bogdan.gavrilovic210
1
vote
1
answer
430
views
1
answer
scatter over optional argument
cwl written 11 months ago by ionox0370 • updated 10 months ago by bogdan.gavrilovic210
2
votes
2
answers
429
views
2
answers
Load/parse cwl in python
cwl written 7 months ago by johnegarza0 • updated 6 months ago by Michael R. Crusoe1.5k
13
votes
1
answer
244
views
1
answer
Markduplicates did not find output file with glob pattern
cwl written 11 weeks ago by yifan wang10 • updated 11 weeks ago by Michael R. Crusoe1.5k
4
votes
1
answer
111
views
1
answer
CWL :Append the ref input used in toolkit
cwl written 7 days ago by lizhichao10 • updated 3 days ago by Michael R. Crusoe1.5k
3
votes
1
answer
744
views
1
answer
0
votes
1
answer
699
views
1
answer
2
votes
1
answer
936
views
1
answer
Directory or string type
cwl written 2.4 years ago by DT20 • updated 2.4 years ago by StarvingMarvin20
3
votes
2
answers
1.8k
views
2
answers
CWL: How to refer to input or scattered value of a step
cwl written 2.4 years ago by mkher30 • updated 5 months ago by jshelton0
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