Showing selected topics • reset
10
votes
0
answers
566
views
5 follow
0
answers
Tool:
A resource with diverse databases and tools for SARS-CoV-2 (COVID-19) bioinformatics -- Updates
written 18 days ago by
Michael • 150
0
votes
2
answers
205
views
2
answers
written 3 months ago by
mrj • 20
• updated
3 months ago by
andres.firrincieli • 480
0
votes
1
answer
109
views
1
answer
written 4 months ago by
DanielC • 120
• updated
4 months ago by
Denise - Open Targets • 5.1k
7
votes
1
answer
266
views
1
answer
written 6 months ago by
caro-ca • 0
• updated
6 months ago by
Mensur Dlakic • 4.2k
4
votes
2
answers
3.9k
views
2
answers
written 5.7 years ago by
Eric Normandeau ♦ 10k
• updated
7 months ago by
Biostar ♦♦ 20
3
votes
1
answer
340
views
1
answer
2
votes
2
answers
574
views
2
answers
written 15 months ago by
arr234 • 20
• updated
15 months ago by
Pierre Lindenbaum ♦ 127k
3
votes
1
answer
654
views
1
answer
2
votes
1
answer
377
views
1
answer
8
votes
1
answer
536
views
1
answer
written 19 months ago by
BioICoder • 40
• updated
19 months ago by
Denise - Open Targets • 5.1k
6
votes
2
answers
934
views
2
answers
written 20 months ago by
kynnjo • 20
• updated
19 months ago by
Kevin Blighe ♦ 56k
0
votes
1
answer
587
views
1
answer
written 20 months ago by
' • 260
• updated
20 months ago by
c.chakraborty • 160
1
vote
1
answer
530
views
1
answer
written 23 months ago by
fawazfebin • 40
• updated
23 months ago by
Kevin Blighe ♦ 56k
5
votes
2
answers
593
views
2
answers
written 2.1 years ago by
gpng • 0
• updated
2.1 years ago by
Emily_Ensembl ♦ 20k
0
votes
1
answer
458
views
1
answer
written 2.2 years ago by
nida.farheen • 0
• updated
2.2 years ago by
Hussain Ather • 940
1
vote
1
answer
622
views
1
answer
written 2.6 years ago by
nkinney06 • 30
• updated
2.6 years ago by
Jean-Karim Heriche ♦ 22k
1
vote
0
answers
1.2k
views
0
answers
1
vote
2
answers
767
views
2
answers
written 2.7 years ago by
edward.messick • 60
• updated
2.7 years ago by
erictleung • 90
Recent Votes
- A: PLINK - Sample(s) present with no genotype data
- C: How many samples are good to find significant targets using GISTIC?
- sam file not showing multi mapped reads
- A: sam file not showing multi mapped reads
- Problem while downloading SRR file via **ASPERA CONNECT**
- get only reads that has multiple alignment on bowtie
- C: How to choose between --cut_ga, --cut_tc, and --cut_nc in hmmsearch? (hmmer)
Recent Locations •
All »
- Germany, 1 minute ago
- Spain/Experimental Station of Zaidin, 5 minutes ago
- USA, 5 minutes ago
Recent Awards • All »
- Scholar to Mensur Dlakic • 4.2k
- Good Answer to WouterDeCoster ♦ 43k
- Supporter to liorglic • 280
- Teacher to chrchang523 ♦ 6.7k
- Scholar to chrchang523 ♦ 6.7k
- Teacher to genomax ♦ 80k
Recent Replies
-
C: What's the best way to serve VCF data on web? by
genomax ♦ 80k
Search brought up this: https://academic.oup.com/bib/article/18/5/774/2562769
-
C: What's the best way to serve VCF data on web? by
genomax ♦ 80k
> Considering there will be thousands of VCFs, Will your solution scale to that level?
-
C: How many samples are good to find significant targets using GISTIC? by
joyk2a • 20
Thanks, Kevin! I will try to do it.
-
A: Python script for sequence alignment not running by
Mensur Dlakic • 4.2k
You probably need to delete these lines from `needleman_wunsch`: sm = read_submat_file(f) ...
-
A: PLINK - Sample(s) present with no genotype data by
chrchang523 ♦ 6.7k
./. encodes a missing genotype.
-
A: Why is hmmsearch only using the 1st HMM in a concatenated HMM database? by
Mensur Dlakic • 4.2k
`hmmsearch` is meant for searching single HMMs at a time against a database of sequences. If you ...
-
C: Attempting to setup snakemake on a compute cluster by
malteherold • 30
Glad I could help and congratulations :)
-
C: How to choose between --cut_ga, --cut_tc, and --cut_nc in hmmsearch? (hmmer) by
Mensur Dlakic • 4.2k
Bit-scores are not affected by `-Z`, only `E-value`.
-
C: How to find mirna target genes of oryctolagus cuniculus? by
top5 • 0
Thank you so much, i will definitely try it.
-
A: SNP subsetting using bcftools by
Kevin Blighe ♦ 56k
Hey, It should definitely be possible to find a way to apply these filters - there is always a w...
-
C: How to find mirna target genes of oryctolagus cuniculus? by
ATpoint ♦ 32k
There is a version at conda you can use I guess. https://anaconda.org/bioconda/miranda
-
C: How to find mirna target genes of oryctolagus cuniculus? by
top5 • 0
İ searched miRanda and found this https://omictools.com/miranda-tool i think it is not working or...
Use of this site constitutes acceptance of our User
Agreement
and Privacy
Policy.
Powered by Biostar
version 2.3.0
Traffic: 994 users visited in the last hour