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Does anyone know good open data sources for metagenomic data linked to a given condition?
open data metagenomics databases written 15 days ago by edward.messick • 40 • updated 11 days ago by erictleung • 90
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Job: Bioinformatics Data Engineer position at Partners Personalized Medicine , Cambridge MA
python software development databases job written 4 months ago by hns • 130
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Where to find canonical versions of 18S sequences?
18s rrna databases written 2.2 years ago by Pawel Szczesny ♦ 3.2k • updated 4 months ago by Alex Bel • 10
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Forum: What to do about moribund databases
updating forum databases written 5 months ago by cdsouthan • 1.7k
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Tool: Convert Panther HMMs from binary to ascii format to use hmmscan
hmms tool databases hmmer written 7 months ago by cavelandiah • 0
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Automatically naming protein sequences based on homology
annotation ortholog homology databases protein written 8 months ago by wl284 • 0
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What does the number after the dot in a PFAM accession mean?
pfam databases accession written 12 months ago by genomeandahalf • 30 • updated 11 months ago by Biostar ♦♦ 20
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Databases and annotation of translocations
sv translocations ngs databases cancer written 15 months ago by alons • 220 • updated 15 months ago by natasha.sernova • 2.5k
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Is there an equivalent of Biopython for Java?
python java biopython databases written 17 months ago by onemoreuser • 0 • updated 17 months ago by Pierre Lindenbaum ♦ 96k
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Best online biological dictionary/glossary?
resources websites databases written 19 months ago by Daniel Neel • 80 • updated 19 months ago by Michael Dondrup ♦ 42k
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Looking for phosphoproteomics data for kinase inhibited states
proteomics kinases phosphoproteomics databases written 20 months ago by richard.carr.3rd • 10 • updated 20 months ago by Pedrobeltrao • 140
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Chip seq data for sigma factors in e.coli
chipseq sigma databases invitro written 20 months ago by geethika.yalamanchili • 0
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Can someone give insight into the difference between current gene-function databases?
gene term rna-seq databases pathway written 21 months ago by VermillionAzure • 0 • updated 21 months ago by Jean-Karim Heriche ♦ 12k
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What is in the NCBI chromosome nucleotide database vs nt/refseq_genomic?
ncbi blast databases myposts written 22 months ago by lauraeiv • 0 • updated 22 months ago by Siva • 1.5k
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What is the best bibliographic database for biomedical text mining?
text mining databases written 22 months ago by dk • 10
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Is there any difference between locus specific database and gene variants database
gene databases written 23 months ago by Fadel • 10 • updated 23 months ago by Dan Gaston ♦ 6.8k
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Job: Internship - Developing web resource for enzymes of unknown function
python enzyme function mysql job databases written 2.4 years ago by venkata.darbha • 30
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how to retreive and download sequence information
databases sequencing written 2.5 years ago by Affan • 270 • updated 2.4 years ago by Biostar ♦♦ 20
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how to convert NCBI protein ID to corresponding nucleotide sequence
gene sequence protein databases written 2.5 years ago by natasha.sernova • 2.5k • updated 2.5 years ago by David W ♦ 4.6k
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BLAST via Biopython NCBIWWW. Where can I find the complete database list?
blast biopython databases written 2.5 years ago by alec_djinn • 300 • updated 2.5 years ago by Siva • 1.5k
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How do MetaCyc and Expasy Enzyme database contents relate to each other?
metacyc expasy enzyme databases metabolic-pathways written 2.5 years ago by Pablo Pareja • 1.6k • updated 2.5 years ago by Elisabeth Gasteiger • 1.1k
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rna seq public databases
rna-seq databases written 2.5 years ago by David_emir • 200 • updated 2.5 years ago by Devon Ryan ♦ 69k
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Storing genomes locally
python genomes sql databases written 2.5 years ago by moranr • 210 • updated 2.5 years ago by Devon Ryan ♦ 69k
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Principles: Where to find structure of CD22 receptor?
protein structure databases receptor written 2.6 years ago by jwitos • 50
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What is the difference between different releases of dbSNP?
vcf annotation snp databases ncbi written 2.7 years ago by Morgan • 20 • updated 2.7 years ago by Pierre Lindenbaum ♦ 96k
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Downloading all eucaryote mitochondrial genomes
mitochondrion databases dna written 3.0 years ago by Eric Normandeau ♦ 9.4k • updated 2.7 years ago by fernie.penaloza • 10
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Downloading ENCODE regulation data in .bed format by cell line
bed encode annotations databases cell line written 2.7 years ago by drautuna • 20 • updated 2.7 years ago by onuralp • 180
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Updating data from UCSC
mysql databases ucsc written 3.0 years ago by Ron • 600 • updated 2.8 years ago by Pierre Lindenbaum ♦ 96k
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small non-coding RNA
smrna databases written 2.9 years ago by biofalconch • 260 • updated 2.9 years ago by Chirag Nepal • 1.9k
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How do you convert the motifs databases provided in MEME suite to FASTA format needed for FIMO
fimo meme conversions databases meme suite written 2.9 years ago by drautuna • 20 • updated 2.9 years ago by komal.rathi • 2.9k
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