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<prev • 192 results • page 1 of 7 • next >
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dbSNP annotation database and appropriate filtering in somatic variant calling pipelines
variant filtering dbsnp somatic variant calling written 10 days ago by svlachavas • 440 • updated 10 days ago by Kevin Blighe ♦ 21k
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2
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5 follow
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Dbsnp In Vcf
vcf dbsnp written 4.4 years ago by win • 750 • updated 20 days ago by SmallChess • 430
2
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1
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117
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Can I use different versions of dbsnp for variant calling using GATK and variant annotation?
variant calling gatk dbsnp variant annotation written 5 weeks ago by dolevrahat • 10 • updated 5 weeks ago by finswimmer ♦ 2.8k
7
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1
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197
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Download full list of SNPs and their coordinates in hg38
hg38 dbsnp snp snpsnap population genetics written 6 weeks ago by gaelgarcia • 100
13
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1
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250
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7 follow
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Simple count of dbSNP (rs...) from .vcf file
.vcf dbsnp written 12 weeks ago by oars • 110 • updated 12 weeks ago by finswimmer ♦ 2.8k
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1
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111
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how would I find SNPs that are highly polymorphic between populations in dbSNP
ncbi allele dbsnp snp written 3 months ago by b10hazard • 20 • updated 3 months ago by agata88 • 660
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2
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dbSNP Batch Query service will be discontinued June 2018: alternatives?
dbsnp written 3 months ago by WouterDeCoster ♦ 29k • updated 3 months ago by dariober ♦ 9.2k
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Download Dbsnp135
vcf dbsnp written 6.6 years ago by Raony Guimaraes • 100 • updated 3 months ago by Biostar ♦♦ 20
3
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1
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254
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1
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how do I get a vcf containing germline snps from dbSNP?
ncbi vcf dbsnp written 3 months ago by b10hazard • 20 • updated 3 months ago by Kevin Blighe ♦ 21k
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280
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No RS id was called in vcf file after giving dbsnp command
no match dbsnp snp written 5 months ago by Kritika • 250
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1
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278
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1
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Base Recalibration with different dbSNPbuild
gatk dbsnp written 6 months ago by jxk906 • 0 • updated 6 months ago by Kevin Blighe ♦ 21k
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308
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how can i get acertainment sample size in dpSNP for all variants of some 15000 genes
gene dbsnp variant written 7 months ago by jananiinfo14 • 0 • updated 6 months ago by Biostar ♦♦ 20
1
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1
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dbsnp hg 38
dbsnp gatk hg38 baserecalibrator written 7 months ago by noeD • 70 • updated 7 months ago by finswimmer ♦ 2.8k
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2
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305
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finding directly the snp ids for the variants of each gene
omim dbsnp variants written 7 months ago by jananiinfo14 • 0 • updated 7 months ago by Pierre Lindenbaum ♦ 108k
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0
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Annotate Ref/Alt for a list of rsIDs?
dbsnp snp written 9 months ago by blazer9131 • 10
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4
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4
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Tool: pyGeno 1.2: Python package for Personalized Genomics and Proteomics
tool python dbsnp snp rna-seq ensembl written 3.2 years ago by Tariq Daouda • 190 • updated 10 months ago by haoye.ecust • 0
0
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0
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433
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dbsnp file for C. elegans
gatk dbsnp c. elegans variation file written 11 months ago by cristian • 90
3
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1
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407
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1
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Why single SNP (rsid) belong to more than one Gene?
gene dbsnp snp written 11 months ago by dasdevashishdas • 120 • updated 11 months ago by WouterDeCoster ♦ 29k
3
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1
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Finding dbSNP rsIDs from a VCF file
vcf dbsnp snp written 12 months ago by marcus.grewal • 0 • updated 12 months ago by genecats.ucsc • 500
4
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dbSNP Zebrafish credibility or quality
dbsnp zebrafish zebrafish dbsnp snp written 16 months ago by sv91707 • 10 • updated 12 months ago by Biostar ♦♦ 20
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9 follow
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get build 37 positions from dbSNP rsIDs
dbsnp rsid written 13 months ago by Tommy Carstensen • 150 • updated 13 months ago by Emily_Ensembl ♦ 15k
4
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1
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Filter/Annotate VCF with dbSNP during variant calling workflow
variant calling vcf ngs bam dbsnp written 3.0 years ago by alons • 250 • updated 13 months ago by Biostar ♦♦ 20
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3
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6 follow
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How To Get The Omim Id For A Dbsnp Entry
dbsnp written 7.3 years ago by User 6659 • 960 • updated 15 months ago by miawe • 0
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Alternate Sources Of Reference Indel Vcfs Outside Of Dbsnp And 1000 Genomes Website
genome vcf dbsnp indel written 4.3 years ago by youngcsong • 100 • updated 16 months ago by Biostar ♦♦ 20
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Variant coordinates in dbSNP VCF
vcf indel coordinates dbsnp rspos written 16 months ago by wjastle • 10
2
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1
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923
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Format VCF for dbSNP upload
vcf gatk snpeff dbsnp formatting written 2.6 years ago by willgilks • 240
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0
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923
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vt normalization of dbSNP VCF
vcf normalization vt dbsnp grch37 written 20 months ago by plink_9857 • 40
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3
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bcftools filter or bcftools isec to EXCLUDE dbSNP snps
filter bcftools vcftools isec dbsnp written 20 months ago by bgold04 • 0 • updated 20 months ago by harold.smith.tarheel • 4.1k
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start and end coordinates reversed in ensembl
ensembl dbsnp variant snp written 21 months ago by jde715 • 0 • updated 21 months ago by harold.smith.tarheel • 4.1k
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Search dbSNP for hg19 based coordinates
dbsnp snp written 2.2 years ago by curious • 30 • updated 21 months ago by cnhuangxy • 0
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