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unit scale in plotprofile plot - deeptools2

chip-seq deeptools2 written 10 months ago by sim.j.baum • 50 • updated 10 months ago by Devon Ryan ♦ 96k

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GC bias correction deepTools2

deeptools deeptools2 written 4.4 years ago by John ♦ 12k • updated 4.4 years ago by Devon Ryan ♦ 96k

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Voter to Dunois • 50
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Recent Replies

C: Does Science have readership for computational tools? by Dunois • 50
Why not [Bioinformatics][1]? [1]: https://academic.oup.com/bioinformatics/
C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2) by genomax ♦ 90k
> if it data is a mix from more than one species, would it show up as an > observable/notab...
C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2) by Dunois • 50
I went back and checked. Annelids. Annelids. Not cnidarians. **Polychaetes are annelids.** **I am...
C: Creating Interactive Volcano Plots with R and Plot.ly by Kevin Blighe ♦ 65k
Please tidy your code with the `101 010` button
C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2) by genomax ♦ 90k
When I searched with `cnidarian polychaete` all google hits seem to indicate that these two organ...
C: How to plot Raster plot by Dunois • 50
[Here's][1] a solution for MATLAB: The concept of a raster plot is in of itself quite general, ...
A: Creating Interactive Volcano Plots with R and Plot.ly by jg43486 • 0
p <- plot_ly(data = diff_df, x = diff_df$Fold, y = -log10(diff_df$FDR), text = diff_df$externa...
C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2) by Dunois • 50
"Polychaete-hosting cnidarians"? No, it's just a polychaete (where did you even get that phrase f...
C: How to plot Raster plot by Alex Reynolds ♦ 30k
https://ggplot2.tidyverse.org/reference/geom_tile.html
C: Help interpreting BLAST results? (Max score/Percent. Identity/E-values) by Mensur Dlakic • 6.6k
The interpretation of percent identity is empirical - there are no prescribed values beyond very ...
C: De novo transcriptome from PE reads with high multi-mapping rate (Bowtie2) by genomax ♦ 90k
> polychaete-hosting cnidarians Does it mean there are two genomes in there or just one? Look...
C: Color code samples by jared.andrews07 ♦ 7.2k
In particular, the `group.by` parameter.

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