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<prev • 74 results • page 1 of 3 • next >
0
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123
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Converting multiple GSE data into expression matrix
R expression matrix deg wgcna written 13 days ago by ghataksoumyakanti • 0
1
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1
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177
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1
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Analyzing LogRPKM Counts Data for finding DEGs(Differential Expressed Genes)
rna-seq deg written 4 weeks ago by naseerkhan861 • 0 • updated 4 weeks ago by ATpoint ♦ 25k
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2
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214
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2
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gene expression RNAseq
rna-seq deg written 6 weeks ago by domingues.pesca • 0
11
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1
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215
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1
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Batch effect problem DEG, DESseq2
batch-effect deseq2 rna-seq deg written 7 weeks ago by maria2019 • 50 • updated 7 weeks ago by ATpoint ♦ 25k
4
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1
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213
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1
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Detecting outlier DESeq2
deseq2 pca deg bulk rna-seq written 7 weeks ago by maria2019 • 50 • updated 7 weeks ago by Kevin Blighe ♦ 51k
1
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1
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157
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1
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How to analyze micoarray data with more than one source.
microarray deg several tissues written 7 weeks ago by nanobiotech.com • 0
2
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0
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183
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0
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How to make differential expression analysis with normalized data?
fpkm deg rna-seq written 9 weeks ago by LuisNagano • 20 • updated 9 weeks ago by ATpoint ♦ 25k
0
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0
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200
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0
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Understanding DESeq2 padj and Volcano Plot
volcano deseq2 rna-seq deg expression written 10 weeks ago by juan.crescente • 20
1
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1
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250
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1
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How could I find Differential Genes in Expression Matrix File NOT gset by R?
R bioconductor microarray deg written 3 months ago by f-tavakoli • 10 • updated 3 months ago by zx8754 ♦ 8.4k
2
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1
answer
198
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1
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illumina ht 12 v4 data analysis
illumina gene expression limma deg annotation written 3 months ago by amin.ghareyazi • 0 • updated 3 months ago by Gordon Smyth • 1.1k
2
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1
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245
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1
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How to connect htseq-count to DESeq2?
R next-gen rna-seq deg mapping written 3 months ago by scheme4193 • 40 • updated 3 months ago by h.mon ♦ 28k
7
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1
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235
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1
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using different microarray datasets (meta-analysis?) for DEG pipeline
meta-analysis microarray deg batch effect written 4 months ago by Moosa • 30 • updated 4 months ago by Kevin Blighe ♦ 51k
1
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1
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169
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1
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GEO differential expression analysis
geo R deg written 4 months ago by yehchan57 • 10 • updated 4 months ago by zephyr_falcon • 80
3
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1
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205
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1
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gene expression anlysis
gene microarray deg written 5 months ago by aishwaryaswain12121995 • 0 • updated 5 months ago by Kevin Blighe ♦ 51k
6
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1
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305
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1
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Differentially expressed genes from expression table (RNAseq)
geo deg expression table rna-seq written 5 months ago by english.server • 160 • updated 5 months ago by ATpoint ♦ 25k
13
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2
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1.2k
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5 follow
2
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How to show both edgeR and deseq2 results in a single volcano plot; highliting overlaps
R deg volcano plot rna-seq written 18 months ago by Farbod • 3.3k • updated 5 months ago by zx8754 ♦ 8.4k
6
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2
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827
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7 follow
2
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How to highlight certain genes in a Volcano Plot in R
R volcano plot deg written 7 months ago by ishackm • 80 • updated 7 months ago by krushnach80 • 610
0
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0
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283
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0
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How to analyse a list of DEG (differentially expressed genes) and DASG (differentially alternatively splices genes)
ngs analysis rna-seq deg written 8 months ago by darbinator • 190
2
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2
answers
340
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2
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DEG from BAM file
gene R rna-seq deg written 8 months ago by bioz • 10 • updated 8 months ago by WouterDeCoster ♦ 42k
0
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1
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361
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1
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DEG analysis from gene list
rna-seq deg written 8 months ago by bioz • 10 • updated 8 months ago by Buffo • 1.7k
1
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0
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209
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0
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Differentially expressed genes interactome
rna-seq deg interactome written 9 months ago by maria.giovanna.de.marino • 0
0
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2
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693
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2
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Any database for downloading cancer cell-lines transcriptome differential expressed gene (DEG) list? (Normal vs cancer cell-lines)
database cancer microarray deg rna-seq written 10 months ago by chiefcat • 130 • updated 10 months ago by Joseph Hughes • 2.8k
3
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0
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394
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0
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Sample-level differential expression for TCGA samples
tcga de rna-seq deg written 10 months ago by rin • 30
0
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0
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333
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0
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Accessing DEG files with extension dat, phr pin,psq
deg files sequence deg written 12 months ago by tzainab.phd16seecs • 0 • updated 12 months ago by WouterDeCoster ♦ 42k
0
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319
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strange output from DEGseq when searching differential expressed genes
rna-seq deg written 13 months ago by tujuchuanli • 50 • updated 12 months ago by Biostar ♦♦ 20
2
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0
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930
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What is the ideal FDR and fold change cutoff to consider in a RNA-seq experiment and which one should be the priority for selecting the DEGs?
fdr deseq2 rna-seq deg fold change written 13 months ago by aishu.jp • 10
2
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1
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671
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1
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DESeq2 DEG analysis using different sequencing depth data
sequencing deseq2 rna-seq deg depth written 13 months ago by woongjaej • 10 • updated 13 months ago by h.mon ♦ 28k
0
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1
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calculate p-value/q-value use fpkm - RNA-Seq
pvalue fpkm rna-seq q-value deg written 13 months ago by AnneC • 0 • updated 13 months ago by Kevin Blighe ♦ 51k
2
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1
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736
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1
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RSEM with ERCC spike-ins formatting issues, ERCC sequences never make it into the reference
ercc rna-seq rsem deg written 13 months ago by brian.capaldo • 10
1
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1
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669
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1
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Combine microarray and RNA-seq gene expression for differentially expression analysis
microarray rna-seq deg written 14 months ago by landscape95 • 160
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