Showing: degreset
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GEO2R - significantly DEGs
geo geo2r deg written 6 weeks ago by hcv0
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Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 3 months ago by Vania10 • updated 3 months ago by h.mon9.2k
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how investigate genes after meta-analysis in each experiment
deseq2 meta-analysis metaseq deg written 4 months ago by Edalat20 • updated 4 months ago by Biostar ♦♦ 20
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Differentially Expressed Genes Analysis with RNA-Seq data
next-gen rna-seq deg written 6 months ago by Xiaokang ZH20 • updated 6 months ago by EagleEye4.8k
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how to set threshold of fdr and p values
limma deg written 7 months ago by flavia0 • updated 7 months ago by b.nota3.6k
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How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 8 months ago by xieshaojun062180 • updated 7 months ago by Michael Love1.5k
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What does benchmark method exactly mean?
benchmark methods edger deg rna-seq written 8 months ago by natalia.fghf260 • updated 8 months ago by Macspider1.6k
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Fold Change accepts, FDR denies; which one to use ?
fdr fc rna-seq deg written 9 months ago by Farbod3.0k • updated 9 months ago by Devon Ryan73k
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RNA-Seq And Genome Annotation file (GFF/GTF)
genome assembly rna-seq deg written 9 months ago by sanathoi10 • updated 9 months ago by pupaliwen0
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Heatmaps: Why and How to use them
heatmaps rna-seq deg written 10 months ago by hougiotaejut10 • updated 10 months ago by mforde841000
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Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 14 months ago by camelbbs610 • updated 14 months ago by i.sudbery1.7k
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A rational way for selecting the number of DEG with significant p-value for GSEA
deg gsea written 20 months ago by Shamim Sarhadi180 • updated 20 months ago by b.nota3.6k
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Analysis ideas for a list of DEG with a lot of unannotated regions?
R microarray deg written 20 months ago by hakimelakhrass70 • updated 20 months ago by biocyberman640
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How to see if DEGs are grouped in genome?
overlap deg rna-seq written 2.1 years ago by Parham1.3k • updated 2.1 years ago by Christian2.6k
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A lot of differentially expressed genes
microarray deg written 2.2 years ago by mahdijalili20 • updated 2.2 years ago by svlachavas250
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DEG by Trinity pipeline
trinity rna-seq deg written 2.8 years ago by mina20 • updated 2.8 years ago by biogirl140
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finding differentially expressed genes in three arm treatment RNA seq data
3 arm treatment rna-seq deg written 3.5 years ago by HNK80 • updated 3.5 years ago by dariober8.2k
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