Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: deg • reset
or   Classic search
<prev • 39 results • page 1 of 2 • next >
8
votes
1
answer
196
views
5 follow
1
answer
Design/contrast matrix for Multivariate experimental design in limma
design matrix limma deg written 9 days ago by 1234anjalianjali1234 • 30 • updated 9 days ago by h.mon ♦ 13k
0
votes
0
answers
109
views
0
answers
Not able to get DEG from FireBrowse data using R
R rna-seq firebrowse deg written 24 days ago by lawarde.ankita1 • 10
0
votes
0
answers
139
views
0
answers
Differential Gene expression between low survival and high survival samples from RNAseq
R deg survival rna-seq written 4 weeks ago by lawarde.ankita1 • 10
2
votes
1
answer
202
views
1
answer
Annotating DEG Heatmap by Go terms
annotation go terms deg heatmap written 8 weeks ago by lawarde.ankita1 • 10 • updated 8 weeks ago by Kevin Blighe ♦ 17k
0
votes
1
answer
131
views
1
answer
Tools to do a linear or logistic regression of DEG
rna-seq deg written 8 weeks ago by amy16 • 20 • updated 8 weeks ago by Kritika • 250
2
votes
1
answer
500
views
5 follow
1
answer
How filter genes to construct co-expression network?
wgcna deg filtering co-expreesion network written 3 months ago by niutster • 60 • updated 3 months ago by Kevin Blighe ♦ 17k
0
votes
1
answer
301
views
1
answer
Identify differentially expressed genes in scatter plot
scatter plot rna-seq deg written 4 months ago by woongjaej • 10 • updated 4 months ago by Hussain Ather • 820
1
vote
0
answers
205
views
0
answers
Comparing DEG result from different experiment
rna-seq deg written 4 months ago by bharata1803 • 250
0
votes
0
answers
436
views
0
answers
Differential Expressed Genes by FPKM expression matrix
R fpkm rna-seq deg written 6 months ago by morteza.kouhsar • 0
0
votes
0
answers
289
views
0
answers
GEO2R - significantly DEGs
geo geo2r deg written 6 months ago by hcv • 0
2
votes
1
answer
413
views
1
answer
Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 9 months ago by Vania • 10 • updated 9 months ago by h.mon ♦ 13k
0
votes
0
answers
341
views
0
answers
how investigate genes after meta-analysis in each experiment
deseq2 meta-analysis metaseq deg written 10 months ago by Edalat • 30 • updated 10 months ago by Biostar ♦♦ 20
0
votes
0
answers
282
views
0
answers
DEGs of various metastatic samples
metastasis deg written 10 months ago by fahime.falahi • 0
10
votes
2
answers
817
views
2
answers
Differentially Expressed Genes Analysis with RNA-Seq data
next-gen rna-seq deg written 11 months ago by Xiaokang ZH • 30 • updated 11 months ago by EagleEye • 5.0k
2
votes
2
answers
893
views
6 follow
2
answers
how to set threshold of fdr and p values
limma deg written 12 months ago by flavia • 0 • updated 12 months ago by b.nota • 3.7k
13
votes
4
answers
760
views
6 follow
4
answers
How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 13 months ago by xieshaojun0621 • 80 • updated 12 months ago by Michael Love • 1.6k
3
votes
1
answer
410
views
1
answer
What does benchmark method exactly mean?
benchmark methods edger deg rna-seq written 13 months ago by statfa • 310 • updated 13 months ago by Macspider • 2.4k
8
votes
1
answer
581
views
1
answer
Fold Change accepts, FDR denies; which one to use ?
fdr fc rna-seq deg written 14 months ago by Farbod • 3.0k • updated 14 months ago by Devon Ryan ♦ 78k
1
vote
1
answer
722
views
1
answer
RNA-Seq And Genome Annotation file (GFF/GTF)
genome assembly rna-seq deg written 15 months ago by sanathoi • 10 • updated 15 months ago by pupaliwen • 0
7
votes
1
answer
1.1k
views
8 follow
1
answer
Forum: How to convincingly illustrate and discuss negative results in NGS.
forum negative results rna-seq deg written 15 months ago by Carlo Yague • 3.9k
11
votes
2
answers
1.0k
views
5 follow
2
answers
Heatmaps: Why and How to use them
heatmaps rna-seq deg written 15 months ago by hougiotaejut • 10 • updated 15 months ago by mforde84 • 1.1k
3
votes
0
answers
962
views
0
answers
Forum: Game Theory: how to use it in RNA-seq DEG analysis
forum game theory rna-seq deg written 18 months ago by Farbod • 3.0k
1
vote
0
answers
807
views
0
answers
RNA-seq time series data analysis ********* updated
multide main effects deg written 19 months ago by statfa • 310
8
votes
2
answers
777
views
2
answers
Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 20 months ago by camelbbs • 610 • updated 20 months ago by i.sudbery • 1.9k
0
votes
0
answers
743
views
0
answers
From cuffmerge to cuffdiff: Which .gtf files should be merged if assession differential gene expression
cuffdiff rna-seq cuffmerge deg written 21 months ago by YaGalbi • 1.1k
0
votes
0
answers
646
views
0
answers
network analysis of DEGs
module finder network analysis deg written 22 months ago by Shamim Sarhadi • 200
2
votes
0
answers
565
views
0
answers
Isoforms with opposite read counts and reverse complement sequences
illumina next-gen deg bowtie2 written 22 months ago by davidfishy • 10
1
vote
0
answers
814
views
0
answers
Which plan is more reasonable, gsea on total dataset , on subset of total dataset with DEG or preRanked gsea?
gsea deg written 24 months ago by Shamim Sarhadi • 200 • updated 24 months ago by John ♦ 12k
6
votes
2
answers
920
views
2
answers
which set of results are more reliable and precise for DEG analysis, limma vs GSEA ?
limma deg gsea written 2.0 years ago by Shamim Sarhadi • 200 • updated 2.0 years ago by vchris_ngs • 4.4k
0
votes
1
answer
645
views
1
answer
A rational way for selecting the number of DEG with significant p-value for GSEA
deg gsea written 2.1 years ago by Shamim Sarhadi • 200 • updated 2.1 years ago by b.nota • 3.7k
<prev • 39 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • University College London Cancer Institute, 1 minute ago
  • United States, 2 minutes ago
  • United Kingdom, 5 minutes ago
  • Egypt, 7 minutes ago
  • Seattle,WA, USA, 7 minutes ago
  • United States, 8 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 994 users visited in the last hour