Showing: degreset
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13
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How to show both edgeR and deseq2 results in a single volcano plot; highliting overlaps
R rna-seq volcano deg written 10 weeks ago by Farbod3.1k • updated 10 weeks ago by russhh3.6k
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How to perform univariate generalized linear models on RNA-seq data?
sartools rna-seq deg glm written 11 weeks ago by Farbod3.1k • updated 11 weeks ago by h.mon16k
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Annotating DEG Heatmap by Go terms
annotation go terms deg heatmap written 4 months ago by lawarde.ankita120 • updated 4 months ago by Kevin Blighe24k
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Tools to do a linear or logistic regression of DEG
rna-seq deg written 4 months ago by amy1620 • updated 4 months ago by Kritika250
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How filter genes to construct co-expression network?
wgcna deg filtering co-expreesion network written 6 months ago by niutster70 • updated 6 months ago by Kevin Blighe24k
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Identify differentially expressed genes in scatter plot
scatter plot rna-seq deg written 7 months ago by woongjaej10 • updated 7 months ago by Hussain Ather880
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GEO2R - significantly DEGs
geo geo2r deg written 9 months ago by hcv0
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Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 11 months ago by Vania10 • updated 11 months ago by h.mon16k
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how investigate genes after meta-analysis in each experiment
deseq2 meta-analysis metaseq deg written 13 months ago by Edalat30 • updated 12 months ago by Biostar ♦♦ 20
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Differentially Expressed Genes Analysis with RNA-Seq data
next-gen rna-seq deg written 14 months ago by Xiaokang ZH40 • updated 14 months ago by EagleEye5.5k
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how to set threshold of fdr and p values
limma deg written 15 months ago by flavia0 • updated 15 months ago by b.nota4.3k
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How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 16 months ago by xieshaojun062180 • updated 15 months ago by Michael Love1.6k
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What does benchmark method exactly mean?
benchmark methods edger deg rna-seq written 16 months ago by statfa310 • updated 16 months ago by Macspider2.4k
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Fold Change accepts, FDR denies; which one to use ?
fdr fc rna-seq deg written 17 months ago by Farbod3.1k • updated 17 months ago by Devon Ryan81k
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RNA-Seq And Genome Annotation file (GFF/GTF)
genome assembly rna-seq deg written 18 months ago by sanathoi10 • updated 18 months ago by pupaliwen0
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Heatmaps: Why and How to use them
heatmaps rna-seq deg written 18 months ago by hougiotaejut10 • updated 18 months ago by mforde841.2k
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Number of reads in one gene affect the differential expression analysis?
rnaseq counts deseq deg rna-seq written 23 months ago by camelbbs630 • updated 23 months ago by i.sudbery2.4k
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