Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing: deg • reset
or   Classic search
<prev • 50 results • page 1 of 2 • next >
1
vote
1
answer
100
views
1
answer
DESeq2 DEG analysis using different sequencing depth data
sequencing deseq2 rna-seq deg depth written 12 hours ago by woongjaej • 10 • updated 1 hour ago by h.mon ♦ 20k
0
votes
0
answers
56
views
0
answers
strange output from DEGseq when searching differential expressed genes
rna-seq deg written 6 days ago by tujuchuanli • 20 • updated 6 days ago by Vijay Lakhujani ♦ 3.1k
0
votes
1
answer
83
views
1
answer
calculate p-value/q-value use fpkm - RNA-Seq
pvalue fpkm rna-seq q-value deg written 11 days ago by AnneC • 0 • updated 11 days ago by Kevin Blighe ♦ 30k
2
votes
1
answer
179
views
1
answer
RSEM with ERCC spike-ins formatting issues, ERCC sequences never make it into the reference
ercc rna-seq rsem deg written 24 days ago by brian.capaldo • 10
1
vote
0
answers
140
views
0
answers
Combine microarray and RNA-seq gene expression for differentially expression analysis
microarray rna-seq deg written 29 days ago by landscape95 • 140
2
votes
1
answer
135
views
1
answer
transcription expression matrix for DESEQ2
R deseq2 rna-seq deg written 4 weeks ago by Duckula • 0 • updated 4 weeks ago by andrew.j.skelton73 ♦ 5.3k
2
votes
1
answer
276
views
6 follow
1
answer
Why my limma DEG result in top Table all without significant meaning,showing logFC <1.5 or logFC>-1.5 ?
;logfc limma deg toptable written 5 weeks ago by BioLite • 0
6
votes
0
answers
246
views
0
answers
lesser fold change value using RMA background correction
normalization rma microarray deg limma written 5 weeks ago by Paul • 60
0
votes
1
answer
131
views
1
answer
making matrix model for samples with one wild type and 4 different results
R edger rna-seq deg voom written 9 weeks ago by moru_all • 0 • updated 9 weeks ago by Marks • 40
13
votes
2
answers
507
views
5 follow
2
answers
How to show both edgeR and deseq2 results in a single volcano plot; highliting overlaps
R rna-seq volcano deg written 5 months ago by Farbod • 3.2k • updated 5 months ago by russhh • 3.9k
1
vote
1
answer
263
views
1
answer
How to perform univariate generalized linear models on RNA-seq data?
sartools rna-seq deg glm written 5 months ago by Farbod • 3.2k • updated 5 months ago by h.mon ♦ 20k
8
votes
1
answer
488
views
5 follow
1
answer
Design/contrast matrix for Multivariate experimental design in limma
design matrix limma deg written 6 months ago by 1234anjalianjali1234 • 30 • updated 6 months ago by h.mon ♦ 20k
0
votes
0
answers
324
views
0
answers
Not able to get DEG from FireBrowse data using R
R rna-seq firebrowse deg written 6 months ago by lawarde.ankita1 • 20
0
votes
0
answers
338
views
0
answers
Differential Gene expression between low survival and high survival samples from RNAseq
R deg survival rna-seq written 6 months ago by lawarde.ankita1 • 20
2
votes
1
answer
605
views
1
answer
Annotating DEG Heatmap by Go terms
annotation go terms deg heatmap written 7 months ago by lawarde.ankita1 • 20 • updated 7 months ago by Kevin Blighe ♦ 30k
0
votes
1
answer
225
views
1
answer
Tools to do a linear or logistic regression of DEG
rna-seq deg written 7 months ago by amy16 • 30 • updated 7 months ago by Kritika • 250
5
votes
1
answer
1.1k
views
5 follow
1
answer
How filter genes to construct co-expression network?
wgcna deg filtering co-expreesion network written 9 months ago by niutster • 80 • updated 9 months ago by Kevin Blighe ♦ 30k
0
votes
1
answer
590
views
1
answer
Identify differentially expressed genes in scatter plot
scatter plot rna-seq deg written 10 months ago by woongjaej • 10 • updated 10 months ago by Hussain Ather • 880
1
vote
0
answers
367
views
0
answers
Comparing DEG result from different experiment
rna-seq deg written 10 months ago by bharata1803 • 310
0
votes
0
answers
811
views
0
answers
Differential Expressed Genes by FPKM expression matrix
R fpkm rna-seq deg written 12 months ago by morteza.kouhsar • 0
0
votes
0
answers
440
views
0
answers
GEO2R - significantly DEGs
geo geo2r deg written 12 months ago by hcv • 0
2
votes
1
answer
570
views
1
answer
Dataset normalised to TPM (GSE85066)
R tpm rna-seq rstudio deg written 14 months ago by Vania • 10 • updated 14 months ago by h.mon ♦ 20k
0
votes
0
answers
441
views
0
answers
how investigate genes after meta-analysis in each experiment
deseq2 meta-analysis metaseq deg written 15 months ago by Edalat • 30 • updated 15 months ago by Biostar ♦♦ 20
0
votes
0
answers
373
views
0
answers
DEGs of various metastatic samples
metastasis deg written 15 months ago by fahime.falahi • 0
10
votes
2
answers
1.1k
views
2
answers
Differentially Expressed Genes Analysis with RNA-Seq data
next-gen rna-seq deg written 17 months ago by Xiaokang ZH • 40 • updated 17 months ago by EagleEye ♦ 5.7k
2
votes
2
answers
1.5k
views
6 follow
2
answers
how to set threshold of fdr and p values
limma deg written 18 months ago by flavia • 0 • updated 18 months ago by b.nota ♦ 5.0k
13
votes
4
answers
1.0k
views
6 follow
4
answers
How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 19 months ago by xieshaojun0621 • 90 • updated 18 months ago by Michael Love • 1.6k
3
votes
1
answer
567
views
1
answer
What does benchmark method exactly mean?
benchmark methods edger deg rna-seq written 19 months ago by statfa • 330 • updated 19 months ago by Macspider • 2.6k
8
votes
1
answer
836
views
1
answer
Fold Change accepts, FDR denies; which one to use ?
fdr fc rna-seq deg written 20 months ago by Farbod • 3.2k • updated 20 months ago by Devon Ryan ♦ 85k
1
vote
1
answer
934
views
1
answer
RNA-Seq And Genome Annotation file (GFF/GTF)
genome assembly rna-seq deg written 21 months ago by sanathoi • 10 • updated 21 months ago by pupaliwen • 0
<prev • 50 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • University of Macau, just now
  • Belgium, 2 minutes ago
  • United States, 4 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 1109 users visited in the last hour