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<prev • 101 results • page 1 of 4 • next >
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How do I get differentially regulated pathways from iDEP/ GSEA?
idep pathway gsea deg written 17 days ago by lakshmi9c • 10
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130
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GO enrichment based on own DEG and GO annotation
go enrichment deg rna-seq written 10 weeks ago by biosjm • 0
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183
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Wilcoxon test, t-test and negative binomial test for DEG of scRNA-Seq data
scrna-seq deg differential expression written 12 weeks ago by CY • 550
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322
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8 follow
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Pathways Analysis in R
pathways deg R written 6 months ago by GiuliaAC • 10 • updated 3 months ago by xanderpico • 330
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206
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Is "TPM" suitable for caculating DEG from different transcriptome researches but one specie
tpm rna-seq deg written 3 months ago by wensulin93 • 0 • updated 3 months ago by ATpoint ♦ 44k
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Pathways Analysis - pvalue
pathways analysis rna-seq p-values deg written 4 months ago by GiuliaAC • 10 • updated 4 months ago by Angel • 10
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193
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When is it valid to use differentially expressed genes as input in WGCNA?
wgcna deg written 4 months ago by bren12345 • 0 • updated 4 months ago by Kevin Blighe ♦ 69k
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188
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problem on ballgown
R ballgown rna-seq deg written 5 months ago by mo.ghasemi717 • 10
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191
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differentially coexpressed genes using wgcna?
differentially coexpressed genes wgcna deg dcgl written 5 months ago by tonmoya.app • 0
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216
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pathway or network from DEG list tool (plant)
pathway network deg written 5 months ago by manekineko • 140 • updated 5 months ago by Leite • 1.1k
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351
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DEGS Analysis in R
R rna-seq deg written 5 months ago by anasjamshed1994 • 60
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Deterimining overall number of differentially expressed genes between WT and KO samples
scrna-seq findmarkers seurat deg written 6 months ago by singcell • 0
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295
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Calculating Contrast Matrix in Limma for Differential Expression
R contrast-matrix limma deg micro-array written 7 months ago by spriyansh29 • 30
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182
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Significant gene expression i non-normal distributed gene expression data
rna-seq deg written 7 months ago by jabbari.parnian • 0 • updated 7 months ago by i.sudbery ♦ 10k
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Find Up-regulated genes and Create Volcano Plot for DEG's in R
R deg volcano-plot written 8 months ago by donnieDarko • 0
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How to distinguish malignant vs non-malignant cells based on gene expression data?
rna-seq deg written 8 months ago by jabbari.parnian • 0 • updated 8 months ago by Kevin Blighe ♦ 69k
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203
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Cutoff value for DEGs
cutoff deg written 8 months ago by zelda • 30 • updated 8 months ago by ATpoint ♦ 44k
4
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1
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225
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1
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RNASeq data analysis without control
rna-seq deg transcriptome written 9 months ago by devarora • 240
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553
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Differential Expression Analysis using Bioconductor (RStudio) and GEO2R (GEO)
gene R bioconductor microarray deg written 10 months ago by a.lathifbt • 20 • updated 10 months ago by Kevin Blighe ♦ 69k
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How to know if I should use voomWithQualityWeights() or not?
voom limma deg rna-seq written 10 months ago by pedrodcb • 50 • updated 10 months ago by Kevin Blighe ♦ 69k
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297
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Code for multiclass differential gene expression analysis
function ttest deg written 11 months ago by orzech_mag • 220
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281
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Handling Microarray datasets from different experiments for DEG analysis
R microarray deg datasets written 11 months ago by a.lathifbt • 20
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Validation of Aberrantly Expressed Genes Using TruSeq
validation rna-seq deg truseq written 11 months ago by v.nguyen0009 • 0
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504
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6 follow
1
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DESeq2 4 group comparison
deseq2 rna-seq deg heatmap written 12 months ago by arabi • 40 • updated 12 months ago by ATpoint ♦ 44k
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500
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How to make Heatmap about DEG?
ballgown rna-seq deg heatmap written 12 months ago by arabi • 40
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363
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EdgeR Warning message In estimateCommonDisp.
R rna-seq edger deg written 12 months ago by Dr.Animo • 10
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300
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differential expression analysis with z score normalized microarray data
microarray deg limma written 13 months ago by gracie • 20 • updated 13 months ago by Biostar ♦♦ 20
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1
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315
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1
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Finding of essential genes using database
deg blast essential genes written 13 months ago by anis.geb.cu • 10 • updated 13 months ago by julien.fouret.fr • 20
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668
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Converting multiple GSE data into expression matrix
R expression matrix deg wgcna written 14 months ago by ghataksoumyakanti • 0
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509
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Analyzing LogRPKM Counts Data for finding DEGs(Differential Expressed Genes)
rna-seq deg written 15 months ago by naseerkhan861 • 10 • updated 15 months ago by ATpoint ♦ 44k
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