Showing: depthreset
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extracting depth info from vcf
vcf ad depth written 4 weeks ago by victoria_aleks30
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What exactly is sequencing depth in RNAseq?
rna-seq depth written 5 weeks ago by carmacae10 • updated 5 weeks ago by Charles Plessy2.3k
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Coverage analysis of NGS data by Depth
ngs panels coverage depth written 5 months ago by nilakshafreezon110 • updated 3 months ago by lethanhx2k10
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Filter SNPs on depth
filter depth vcftools snp mindp written 5 months ago by Covux10 • updated 5 months ago by Istvan Albert ♦♦ 75k
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How to plot coverage and depth statistics of a bam file
sequencing next-gen coverage bam depth written 3.5 years ago by krithika.gu170 • updated 5 months ago by bioinfo890
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How does coverage of all contigs varies?
reads ngs coverage depth written 8 months ago by BioGeek80 • updated 8 months ago by h.mon9.8k
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Difference between samtools DEPTH and MPILEUP
reads samtools chip-seq mpileup depth written 14 months ago by ariel.balter120 • updated 14 months ago by Devon Ryan74k
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How to use bedtools coverage
bedtools chip-seq coverage depth written 15 months ago by ariel.balter120 • updated 15 months ago by Devon Ryan74k
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How to get per sample read depth from VCF with no DP field
vcf coverage depth written 18 months ago by Rubal200 • updated 18 months ago by chen1.2k
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samtools depth -a while removing duplicates
samtools depth written 21 months ago by QVINTVS_FABIVS_MAXIMVS2.0k • updated 21 months ago by winter_li40
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Depth of coverage for specific target from bam file
coverage depth written 2.5 years ago by jfjiang10 • updated 2.5 years ago by Jorge Amigo10.0k
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1000G high coverage depth of sequencing?
1000g depth coverage sequencing written 2.6 years ago by Tommy Carstensen110 • updated 2.6 years ago by Adam940
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relationship between coverage and expression level in RNAseq
depth experiment design rna-seq expression written 2.7 years ago by shl198330 • updated 2.7 years ago by Gary420
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per bp depth intersected with gff file
bedtools bam coverage depth written 2.7 years ago by Biomonika (Noolean)3.0k • updated 2.7 years ago by Devon Ryan74k
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CNV by read_depth approach
R normalization cnv depth written 2.8 years ago by Anon0
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GO terms depth level
gene ontology go depth written 3.2 years ago by ncl.lazzarini90 • updated 3.2 years ago by Pierre Lindenbaum102k
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Depth of RNAseq with sensitive detection
expression rna-seq depth written 3.4 years ago by sckinta410 • updated 3.3 years ago by tangming20052.2k
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Different coverage from bedtools and in vcf file - HELP PLEASE
bedtools vcf coverage depth written 3.5 years ago by Paul930 • updated 3.4 years ago by Biostar ♦♦ 20
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