Showing: deseq2reset
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Indpendent Filtering in DESeq2
deseq2 independent filtering written 15 days ago by EVR410 • updated 15 days ago by Devon Ryan63k
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Log2 raw count matrix with one condition
deseq2 written 19 days ago by User000240 • updated 19 days ago by Carlo Yague2.7k
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Pairwise comparision in DESeq2
deseq2 rna-seq written 21 days ago by EVR410 • updated 21 days ago by Carlo Yague2.7k
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How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 23 days ago by xieshaojun062160 • updated 22 days ago by unksci90
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Is inspection and correction of pvalues still needed in DESeq2?
deseq2 rna-seq written 21 months ago by jake.hagen40 • updated 26 days ago by EVR410
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DESeq2 for non-model organisms
deseq2 rna-seq written 27 days ago by ####90
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Isoform Differential Expression Analysis
ebseq deseq2 rsem rna-seq written 10 weeks ago by john30 • updated 5 weeks ago by EVR410
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RNA-Seq replicates with big differences in medians of VST values
degs deseq2 rna-seq vst written 5 weeks ago by panconchoclo10 • updated 5 weeks ago by shunyip130
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Add GenomicRanges to SummarizedExperiment
deseq2 summarizedexperiment granges written 9 weeks ago by s.w.vanderlaan40 • updated 5 weeks ago by Biostar ♦♦ 10
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How do I get the weights of genes used in PCA in DESeq2?
gene list deseq2 pca loadings written 5 weeks ago by cristian30 • updated 5 weeks ago by igor3.7k
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Deseq2: Time series experiment with 2 conditions and 5 time points
R deseq2 rna-seq written 23 months ago by stan50 • updated 5 weeks ago by deni.ribicic0
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Looking for an alternative to DeSeq2 for taxa higher than OTU level
R deseq2 qiime written 11 weeks ago by sarahmacdonald860 • updated 7 weeks ago by Biostar ♦♦ 10
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number of genes for co-expression network
co-expression deseq2 rna-seq written 8 weeks ago by Edalat10 • updated 8 weeks ago by shunyip130
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DESeq2 Normalization of time course
normalization deseq2 rna-seq written 3 months ago by EVR410 • updated 9 weeks ago by bioinfo1710
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Package interactions in R
R deseq2 written 7 months ago by mikael.lenz.strube40 • updated 9 weeks ago by Biostar ♦♦ 10
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Strange MA-plot using DESeq2
R deseq2 rna-seq written 4 months ago by stan50 • updated 10 weeks ago by Biostar ♦♦ 10
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deseq dataset from star
deseq2 star rna-seq written 11 weeks ago by Pals1.3k • updated 11 weeks ago by bruce.moran170
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DE analysis of low-expression transcripts
sleuth expression deseq2 rna-seq edger written 11 weeks ago by elsoja0 • updated 11 weeks ago by Devon Ryan63k
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replicates in edgeR and DESeq2
deseq2 rna-seq edger cancer cell line encyclopedia written 12 weeks ago by hibari.kyouya10 • updated 11 weeks ago by mforde84450
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DESeq2 proper design setting
deseq2 design differential expression rna-seq written 3 months ago by Macspider580 • updated 3 months ago by Carlo Yague2.7k
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