Showing: deseq2reset
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Using RPK counts as DESeq2 input
deseq2 written 1 day ago by adityabandla20 • updated 1 day ago by Devon Ryan65k
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DESeq2: Find differentially expressed genes specific to one condition
deseq2 rna-seq written 23 months ago by Christian2.5k • updated 4 days ago by Martombo1.7k
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Discrepancy in DESeq2 fold change
R deseq2 rna-seq written 12 days ago by sophie.ehresmann0 • updated 12 days ago by Santosh Anand2.2k
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too many adj pvalues = 1
p-value deseq2 rna-seq written 15 days ago by Illinu80 • updated 15 days ago by Devon Ryan65k
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Fasta to gff with custom set of genes
fasta genome gff deseq2 rna-seq written 4 weeks ago by tlorin150 • updated 4 weeks ago by Macspider1.1k
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Can someone please explain in simple terms how DESeq2 works?
deseq2 written 2.3 years ago by BioStars199360 • updated 5 weeks ago by Biostar ♦♦ 10
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SummarizeOverlaps [R] Status 127 error
R status127 summarizeoverlaps deseq2 error written 22 months ago by lillyhchen0 • updated 5 weeks ago by zx87543.7k
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How to define a non differentially expressed gene?
deseq2 edger deg non-deg rna-seq written 11 weeks ago by xieshaojun062180 • updated 6 weeks ago by Michael Love1.3k
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How to read multiple samples with DESeq2?
R deseq2 rna-seq written 6 weeks ago by mirzaei86.vahid10 • updated 6 weeks ago by vchris_ngs3.1k
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DESeq2 object problem with padj
deseq2 padj written 6 weeks ago by pennakiza0 • updated 6 weeks ago by Devon Ryan65k
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Indpendent Filtering in DESeq2
deseq2 independent filtering written 9 weeks ago by EVR420 • updated 9 weeks ago by Devon Ryan65k
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Log2 raw count matrix with one condition
deseq2 written 10 weeks ago by User000240 • updated 10 weeks ago by Carlo Yague2.9k
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Pairwise comparision in DESeq2
deseq2 rna-seq written 10 weeks ago by EVR420 • updated 10 weeks ago by Carlo Yague2.9k
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Is inspection and correction of pvalues still needed in DESeq2?
deseq2 rna-seq written 22 months ago by jake.hagen40 • updated 11 weeks ago by EVR420
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DESeq2 for non-model organisms
deseq2 rna-seq written 11 weeks ago by ####90
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Isoform Differential Expression Analysis
ebseq deseq2 rsem rna-seq written 4 months ago by john30 • updated 3 months ago by EVR420
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RNA-Seq replicates with big differences in medians of VST values
degs deseq2 rna-seq vst written 3 months ago by panconchoclo10 • updated 3 months ago by shunyip140
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