Latest
Open
RNA-Seq
ChIP-Seq
SNP
Assembly
Tutorials
Tools
Jobs
Forum
Planet
All »
Home
Log In
Showing selected topics • reset
or   Classic search
<prev • 48 results • page 1 of 2 • next >
3
votes
1
answer
92
views
1
answer
DEXSeq aggregates two different genes together
dexseq rna-seq written 7 days ago by rohitsatyam102 • 90 • updated 6 days ago by Kevin Blighe ♦ 60k
0
votes
0
answers
55
views
0
answers
DEXSeq gives most of the reads as "_empty"
dexseq software error next-gen alignment rna-seq written 7 days ago by rohitsatyam102 • 90
2
votes
1
answer
970
views
1
answer
Pipeline for analysing RNA-seq exon level data with lot of samples?
dexseq deseq2 diffsplice diffsplicedge rna-seq written 2.8 years ago by sarin.heikki.v • 10 • updated 22 days ago by Biostar ♦♦ 20
0
votes
1
answer
310
views
1
answer
DEXSeq Installation Error
dexseq rna-seq alternative splicing written 7 months ago by deepak18 • 10 • updated 5 months ago by Biostar ♦♦ 20
0
votes
0
answers
275
views
0
answers
featureCount error - cannot identify gene_id
dexseq rsubread featurecount software error written 5 months ago by seung.ho.steven.choi • 0
1
vote
1
answer
727
views
5 follow
1
answer
Some problems with DEXSEQ analyse
dexseq expression rna-seq isoform written 15 months ago by darbinator • 220 • updated 6 months ago by kristoffer.vittingseerup • 3.2k
1
vote
0
answers
197
views
0
answers
Problem during read counting with DEXSeq
dexseq rna-seq written 6 months ago by deepak18 • 10
0
votes
0
answers
168
views
0
answers
DEXSeq output from Galaxy
dexseq galaxy written 7 months ago by anand.gururajan • 0 • updated 7 months ago by WouterDeCoster ♦ 43k
6
votes
2
answers
487
views
2
answers
Print Differentially Expressed Exons From Dexseq Results
dexseq rna-seq written 12 months ago by justinkablan225 • 10
2
votes
1
answer
1.8k
views
1
answer
HtSeq installation error
htseq dexseq rna-seq written 3.1 years ago by BM • 60 • updated 12 months ago by ATpoint ♦ 34k
0
votes
1
answer
490
views
1
answer
DEXseq Error - SummarizedExperiment
dexseq deseq2 rna-seq summarizedexperiment written 12 months ago by BM • 60 • updated 12 months ago by benformatics • 1.6k
2
votes
1
answer
578
views
1
answer
RNA-Seq Analysis with DEXSeq
dexseq rna-seq written 13 months ago by justinkablan225 • 10 • updated 13 months ago by shawn.w.foley • 1.2k
2
votes
1
answer
538
views
1
answer
error in prepare annotation script DEXseq
dexseq rnaseq ensamble gencode deu written 16 months ago by Lila M • 820 • updated 14 months ago by vida.t • 0
1
vote
1
answer
533
views
1
answer
How does DEXSeq calculate exon usage values
dexseq splicing exon usage rna-seq written 16 months ago by sneha108.ss • 0 • updated 16 months ago by Nicolas Rosewick ♦ 8.8k
1
vote
0
answers
787
views
0
answers
Help interpreting error from DEXSeq
dexseq rna-seq written 19 months ago by squando • 10 • updated 18 months ago by Lance • 30
2
votes
1
answer
890
views
1
answer
Sorting BAM files from HISAT2 for DEXSeq
dexseq rna-seq hisat2 written 19 months ago by squando • 10 • updated 19 months ago by Ian ♦ 5.6k
1
vote
1
answer
961
views
1
answer
Issue with DEXSeq installation
dexseq R bioconductor written 2.4 years ago by Yuka Takemon • 40 • updated 2.4 years ago by Hussain Ather • 940
0
votes
0
answers
842
views
0
answers
Removing genes found on two (or more) chromosomes from gtf file
gtf dexseq awk python bash written 2.5 years ago by arta • 580
2
votes
0
answers
779
views
0
answers
Error when run testForDEU DEXSeq
dexseq rnaseq error deu written 2.6 years ago by Lila M • 820
5
votes
1
answer
1.1k
views
1
answer
Why does GFF prepared using dexseq_prepare_annotation shows different exon number than UCSC genome browser
dexseq exons dexseq_prepare_annotation written 2.7 years ago by komal.rathi • 3.6k • updated 2.7 years ago by Devon Ryan ♦ 95k
2
votes
0
answers
1.6k
views
0
answers
How to interpret DEXseq results in therms of significance
dexseq exon rna-seq written 2.7 years ago by Lila M • 820
0
votes
0
answers
1.5k
views
0
answers
how to use DEXSeq with raw exon count matrix downloaded from TCGA
dexseq R exon rna-seq written 2.8 years ago by ren.yingxue • 0 • updated 2.7 years ago by Biostar ♦♦ 20
1
vote
1
answer
1.2k
views
1
answer
DEXSeq transcripts per condition
dexseq rna-seq written 2.7 years ago by mail2steff • 50 • updated 2.7 years ago by Lila M • 820
0
votes
1
answer
641
views
1
answer
dexseq_count.py: strandness of data from portal.gdc.cancer.gov
dexseq tcga dexseq_count written 2.9 years ago by Lila M • 820 • updated 2.9 years ago by Istvan Albert ♦♦ 84k
1
vote
2
answers
1.2k
views
5 follow
2
answers
TCGA raw counts DexSeq
dexseq tcga rna-seq written 2.9 years ago by Newbie • 0 • updated 2.9 years ago by H.Hasani • 900
0
votes
0
answers
813
views
0
answers
DEXSeq batch effects issue
dexseq rna-seq written 3.0 years ago by ag1194 • 0
3
votes
1
answer
3.2k
views
1
answer
problems installing HTSeq
htseq dexseq rna-seq written 3.1 years ago by Lila M • 820 • updated 3.1 years ago by Devon Ryan ♦ 95k
2
votes
0
answers
1.5k
views
0
answers
Deseq2/Dexseq: why is LRT significant if estimated coefficients under two conditions are almost the same?
dexseq R deseq2 rna-seq written 3.1 years ago by cindyz • 30
0
votes
0
answers
959
views
0
answers
compare rows of colData and count Matrix
dexseq matrix deseq written 3.3 years ago by Assa Yeroslaviz • 1.3k
0
votes
0
answers
809
views
0
answers
Appropriate to apply RUVSeq to exon bin counts for DEXSeq?
dexseq R bioconductor ruvseq rna-seq written 3.4 years ago by Adamc • 640
<prev • 48 results • page 1 of 2 • next >
Recent Votes
Recent Locations • All »
  • Finland, 9 minutes ago
  • United States, 12 minutes ago
  • United States, 29 minutes ago
Recent Awards • All »
Recent Replies
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.3.0
Traffic: 862 users visited in the last hour