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<prev • 68 results • page 1 of 3 • next >
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Differential Gene Expression Analysis with low biological replicates
R ngs differential-expression rna-seq written 5 months ago by spriyansh29 • 30 • updated 4 months ago by Biostar ♦♦ 20
4
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3
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1.8k
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5 follow
3
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Go Analysis From De-Genes
differential-expression go written 6.7 years ago by Phil S. • 660 • updated 4 months ago by Biostar ♦♦ 20
0
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0
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376
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0
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Seurat integrated analysis - methods for cell-type specific responses
single-cell differential-expression rna-seq written 6 months ago by jomo018 • 610
0
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0
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247
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0
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Filtering criteria for selecting DEGs from Monocle3 regression analysis with categorical terms
differential-expression rna-seq monocle written 10 months ago by gundalav • 300
4
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1
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648
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1
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Differential expression tool that can take TPM as input?
differential-expression tpm rna-seq written 10 months ago by Tye Kahn • 10 • updated 10 months ago by ATpoint ♦ 40k
0
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1
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519
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1
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Identifiyng mutual trends between treatments
differential-expression deseq2 rna-seq statistics written 22 months ago by uriamo • 0 • updated 22 months ago by kristoffer.vittingseerup • 3.4k
2
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1
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412
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1
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Is it correct to pool transcriptomes coming from different experiment for DE analysis?
differential-expression rna-seq written 2.2 years ago by keepclam • 10 • updated 2.2 years ago by WouterDeCoster ♦ 44k
1
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0
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1.3k
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0
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FPKM values from SE vs. PE RNA-Seq libraries
gene fpkm differential-expression rna-seq written 3.3 years ago by s_herrera • 10 • updated 2.2 years ago by Biostar ♦♦ 20
0
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1
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723
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1
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Differential Expression from Quantile-Norm Data
differential-expression rna-seq written 2.5 years ago by matthew.m.hernandez • 30 • updated 2.5 years ago by Hussain Ather • 940
13
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4
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1.9k
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5 follow
4
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Is it appropriate to assume genes of similar expression level also have similar variance?
differential-expression deseq written 2.8 years ago by -_- • 860 • updated 2.8 years ago by Santosh Anand ♦ 5.2k
11
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2
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9.4k
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9 follow
2
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Why Cannot Limma Package Do Differential Expression Between Two Samples Without Replication?
replicates differential-expression limma affymetrix written 7.4 years ago by shangzhong0619 • 20 • updated 2.8 years ago by Biostar ♦♦ 20
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1
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1.2k
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8 follow
1
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Intersection of multiple methods for RNA-Seq differential expression: conservative or crazy?
differential-expression rna-seq written 3.0 years ago by Adamc • 640 • updated 3.0 years ago by Friederike ♦ 6.4k
1
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1
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1.5k
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1
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Transcripts with beta close to zero are considered differentially expressed in a likelihood-ratio test in sleuth
sleuth differential-expression rna-seq written 3.2 years ago by elsoja • 120
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2
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1.7k
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2
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differential expression based on multiple biological repeats
rpkm differential-expression rna-seq written 6.1 years ago by Whetting • 1.5k • updated 3.1 years ago by KVC_bioinfo • 510
2
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1
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2.0k
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1
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Multiple group model matrix in rna-seq DE analysis
differential-expression rna-seq model-matrix written 3.3 years ago by andrea.rubiop88 • 0 • updated 3.3 years ago by Devon Ryan ♦ 97k
0
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0
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1.6k
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0
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MA plot from Differential Expression between One Sample vs another
R bioconductor differential-expression rna-seq written 3.4 years ago by Ron • 1.0k
8
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1
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3.5k
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6 follow
1
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Select top differentially expressed genes based on both p-value and fold-change
differential-expression deseq2 rna-seq written 3.5 years ago by RT • 350 • updated 3.5 years ago by Santosh Anand ♦ 5.2k
1
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1
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5.0k
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5 follow
1
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De Genes And Isoforms?
ngs differential-expression rna-seq written 7.5 years ago by lzsph • 70 • updated 3.5 years ago by Biostar ♦♦ 20
16
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2
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1.2k
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2
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Differences between Counts and FPKMS
next-gen differential-expression deseq rna-seq written 3.7 years ago by Ron • 1.0k • updated 3.7 years ago by Rob ♦ 4.5k
13
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3
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7.2k
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9 follow
3
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Identifying De Novo Variants In Trio Data
gatk differential-expression variant written 8.3 years ago by Vivek • 2.4k • updated 4.1 years ago by daniel • 30
11
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2
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7.9k
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5 follow
2
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How Do I Estimate The Number Of Rna-Seq Reads Needed To Detect Differential Expression?
reads differential-expression rna-seq written 6.9 years ago by scottdaniel25 • 30 • updated 4.2 years ago by Biostar ♦♦ 20
9
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2
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3.8k
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2
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Limma calls all genes as differentially expressed - what am I doing wrong?
differential-expression limma rna-seq voom written 6.1 years ago by Amusement Pork • 60 • updated 6.1 years ago by Manvendra Singh • 2.1k
7
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0
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3.5k
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0
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What's the real difference between these two types of methods for assessing differential expression?
differential-expression methods rna-seq written 6.1 years ago by Amusement Pork • 60
9
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4
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9.1k
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9 follow
4
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Rna-Seq Data Normalization With Spike-In Using Deseq
R differential-expression bioinformatics written 7.2 years ago by ivivek_ngs • 5.0k • updated 6.2 years ago by Reza • 10
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1
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8 follow
1
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Deseq Vs Edger..Filtering Read Counts.
deseq differential-expression tophat2 rna-seq rnaseq edger written 6.7 years ago by geek_y ♦ 11k • updated 6.4 years ago by bioinforupesh2009.au • 130
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3
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Best Workflow For Differential Expression Analysis Using De Novo Transcriptomes And Illumina Reads In 2014
differential-expression workflow alignment written 6.6 years ago by Birdman • 20 • updated 6.6 years ago by seidel ♦ 7.1k
3
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2
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6.1k
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2
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Generating Counts Data From Fastq Sequence Files
fastq differential-expression counts rna-seq sequencing written 6.6 years ago by josph.sh • 0 • updated 6.6 years ago by Xingyu Yang • 260
2
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1
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6.3k
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1
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Normalization And Differential Expression Analysis Of Mass Spectrometry Data
proteomics normalization differential-expression mass-spec R written 6.6 years ago by Ali • 140 • updated 6.6 years ago by Woa • 2.8k
3
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1
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13k
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1
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Cuffdiff Output Interpretation
differential-expression cuffdiff written 6.7 years ago by madkitty • 620
2
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1
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4.9k
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1
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Differential Expression Analysis Using Two Different De Novo Assembled Transcriptomes
differential-expression rna-seq written 6.7 years ago by Birdman • 20 • updated 6.7 years ago by Charles Warden ♦ 7.9k
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