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<prev • 28 results • page 1 of 1 • next >
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Is it right to use a low amount of bumphunter permutations?
methylation microarray dmr written 8 weeks ago by jeni • 30
3
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1
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170
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1
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Is definition of differentially methylated region (DMR) biologically meaningful?
methylation dmr written 10 weeks ago by CY • 550 • updated 10 weeks ago by Hamid Ghaedi • 710
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174
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Comb-p for Differentially Methylated Regions identification
regions methylation dmr cpg written 7 months ago by manu • 0
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132
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Interpretation of differentially methylated regions width / number of cpgs
differentially methylated regions methylation dmr written 7 months ago by manu • 0
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152
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how to get methylated fragments (CpG regions) for only ONE sample using DMAP
methylation dmr dmap cpg written 9 months ago by maria2019 • 100
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489
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How to generate CpG REGIONs file to run DMR analysis with methylkit?
methylkit dmr rrbs cpg-regions written 10 months ago by maria2019 • 100 • updated 10 months ago by Charles Warden ♦ 7.9k
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392
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1
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RRBS analysis using methylkit with 2 variables
methylkit dmr rrbs written 12 months ago by maria2019 • 100
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794
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bumphunter for 3 (or more) groups
bumphunter methylation epic array minfi dmr written 19 months ago by alfonsosaera • 20 • updated 12 months ago by Biostar ♦♦ 20
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0
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229
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Single-sample methylation region-finder packages
regions epigenetics methylation wgbs dmr written 13 months ago by Papyrus • 540
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570
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1
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What background to use for functional annotation analysis of RRBS DMR data?
annotation methylation rrbs go dmr written 21 months ago by alan.g.hudson • 0 • updated 17 months ago by gurbetkarahan • 0
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714
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Cannot identify software used to make image
dmr written 21 months ago by dec986 • 230 • updated 21 months ago by bernatgel • 2.7k
6
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2
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1.7k
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9 follow
2
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How to do DMR analysis with BiSeq (for RRBS methylation data)?
methylation dmr sequencing written 2.9 years ago by ahmad mousavi • 480 • updated 21 months ago by Charles Warden ♦ 7.9k
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885
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Paired DMR methylation caller
dmr bisulfite written 2.0 years ago by German.M.Demidov • 1.9k • updated 2.0 years ago by Charles Warden ♦ 7.9k
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952
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Are there any way to find DMR with the data in TCGA methylation level3?
450k tcga methylation dmr written 2.2 years ago by Makplus T • 70 • updated 2.1 years ago by Kevin Blighe ♦ 67k
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999
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What statistical test for CpG DMR ?
epigenetics methylation statistical test dmr written 2.3 years ago by alorsonmethyle • 30
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1
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1.3k
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1
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Differentially methylated regions Analysis
tcgabiolinks packages dmr written 2.7 years ago by David_emir • 380 • updated 2.7 years ago by noorpratap.singh • 300
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1
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2.1k
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1
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TCGABioLinks how to set Sample conditions?
tcgabolinks tcga dmr dge written 2.7 years ago by David_emir • 380 • updated 2.7 years ago by mathias.heydt • 90
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6 follow
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Tutorial: Differentially methylated regions: Easy & Fast Identification and ANnoTation
dna methylation tutorial dmr written 2.7 years ago by dec986 • 230
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2
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1.8k
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2
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Multisample DMR calling
methylation dmr written 4.1 years ago by Aerval • 280 • updated 3.0 years ago by hongbo919 • 20
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1.4k
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0
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How to get metthylKit(or SMART2) input file ?
dna methylation dmr bismark methylkit written 3.1 years ago by wangzer • 0
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3.4k
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2
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Statistical test for DMR annotation?
methylation dmr statistics written 5.9 years ago by Amit Lavon • 10 • updated 3.3 years ago by jordi • 0
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1.1k
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2
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Assessing DMRs between treatment groups: subtracting control group DMRs to account for "baseline" methylation
illumina 850k dmr methylationepic written 3.7 years ago by Ellen O • 10 • updated 3.4 years ago by hongbo919 • 20
4
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1
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5 follow
1
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Selecting between p.value, FDR, Bonferroni
package statistical parameters seqlm dmr written 3.5 years ago by niutster • 100 • updated 3.5 years ago by agata88 • 800
2
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2.4k
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MeDIP-Seq DMR analysis using MEDIPS
R medip-seq medips dmr methylation written 5.8 years ago by G.S • 40 • updated 3.9 years ago by Biostar ♦♦ 20
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What input files does the software metilene accept/require to identify the DMR between groups for WGBS data?
wgbs dmr written 4.1 years ago by 331885030 • 0 • updated 4.1 years ago by Devon Ryan ♦ 97k
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1.4k
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1
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Mapping Genes in Differentially Methylated Regions
dmr r packages written 4.2 years ago by questionaire • 0 • updated 4.2 years ago by Carlo Yague • 5.2k
3
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1.7k
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Question about MEDIPS
R medips dmr methylation written 5.1 years ago by hxlei613 • 90 • updated 4.9 years ago by Biostar ♦♦ 20
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Methylation analysis with MEDIPS
medip-seq methylation dmr medips R written 6.3 years ago by ilyco • 50 • updated 6.2 years ago by Devon Ryan ♦ 97k
<prev • 28 results • page 1 of 1 • next >
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