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0
votes
1
answer
218
views
1
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What background to use for functional annotation analysis of RRBS DMR data?
annotation methylation rrbs go dmr written 5 months ago by alan.g.hudson • 0 • updated 9 weeks ago by gurbetkarahan • 0
0
votes
0
answers
186
views
0
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bumphunter for 3 (or more) groups
bumphunter methylation epic array minfi dmr written 4 months ago by alfonsosaera • 0
10
votes
2
answers
320
views
2
answers
Cannot identify software used to make image
dmr written 6 months ago by dec986 • 200 • updated 6 months ago by bernatgel • 2.0k
4
votes
2
answers
990
views
8 follow
2
answers
How to do DMR analysis with BiSeq (for RRBS methylation data)?
methylation dmr sequencing written 19 months ago by ahmad mousavi • 450 • updated 6 months ago by Charles Warden ♦ 7.2k
3
votes
1
answer
405
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1
answer
Paired DMR methylation caller
dmr bisulfite written 9 months ago by kuckunniwid • 70 • updated 9 months ago by Charles Warden ♦ 7.2k
0
votes
1
answer
540
views
1
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Are there any way to find DMR with the data in TCGA methylation level3?
450k tcga methylation dmr written 11 months ago by Timze W • 20 • updated 9 months ago by Kevin Blighe ♦ 46k
3
votes
1
answer
492
views
1
answer
What statistical test for CpG DMR ?
epigenetics methylation statistical test dmr written 12 months ago by alorsonmethyle • 20
0
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1
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826
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1
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Differentially methylated regions Analysis
tcgabiolinks packages dmr written 17 months ago by David_emir • 350 • updated 17 months ago by noorpratap.singh • 280
2
votes
1
answer
1.1k
views
1
answer
TCGABioLinks how to set Sample conditions?
tcgabolinks tcga dmr dge written 17 months ago by David_emir • 350 • updated 17 months ago by mathias.heydt • 90
4
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0
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1.5k
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6 follow
0
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Tutorial: Differentially methylated regions: Easy & Fast Identification and ANnoTation
dna methylation tutorial dmr written 18 months ago by dec986 • 200
2
votes
2
answers
1.4k
views
2
answers
Multisample DMR calling
methylation dmr written 2.8 years ago by Aerval • 280 • updated 21 months ago by hongbo919 • 20
0
votes
0
answers
534
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0
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How to get metthylKit(or SMART2) input file ?
dna methylation dmr bismark methylkit written 22 months ago by wangzer • 0
3
votes
2
answers
2.9k
views
2
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Statistical test for DMR annotation?
methylation dmr statistics written 4.7 years ago by Amit Lavon • 10 • updated 2.0 years ago by jordi • 0
0
votes
2
answers
850
views
2
answers
Assessing DMRs between treatment groups: subtracting control group DMRs to account for "baseline" methylation
illumina 850k dmr methylationepic written 2.4 years ago by Ellen O • 10 • updated 2.1 years ago by hongbo919 • 20
4
votes
1
answer
1.7k
views
5 follow
1
answer
Selecting between p.value, FDR, Bonferroni
package statistical parameters seqlm dmr written 2.3 years ago by niutster • 80 • updated 2.3 years ago by agata88 • 790
2
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0
answers
2.0k
views
0
answers
MeDIP-Seq DMR analysis using MEDIPS
R medip-seq medips dmr methylation written 4.5 years ago by G.S • 40 • updated 2.6 years ago by Biostar ♦♦ 20
0
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1
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996
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1
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What input files does the software metilene accept/require to identify the DMR between groups for WGBS data?
wgbs dmr written 2.8 years ago by 331885030 • 0 • updated 2.8 years ago by Devon Ryan ♦ 91k
0
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1
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1.0k
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1
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Mapping Genes in Differentially Methylated Regions
dmr r packages written 3.0 years ago by questionaire • 0 • updated 3.0 years ago by Carlo Yague • 4.6k
3
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0
answers
1.4k
views
0
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Question about MEDIPS
R medips dmr methylation written 3.8 years ago by hxlei613 • 80 • updated 3.7 years ago by Biostar ♦♦ 20
1
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2
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2.1k
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2
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Methylation analysis with MEDIPS
medip-seq methylation dmr medips R written 5.1 years ago by ilyco • 50 • updated 5.0 years ago by Devon Ryan ♦ 91k
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