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Is definition of differentially methylated region (DMR) biologically meaningful?
methylation dmr written 5 months ago by CY560 • updated 5 months ago by Hamid Ghaedi1.2k
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How to generate CpG REGIONs file to run DMR analysis with methylkit?
methylkit dmr rrbs cpg-regions written 13 months ago by maria2019130 • updated 13 months ago by Charles Warden8.0k
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bumphunter for 3 (or more) groups
bumphunter methylation epic array minfi dmr written 23 months ago by alfonsosaera20 • updated 16 months ago by Biostar ♦♦ 20
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Cannot identify software used to make image
dmr written 2.0 years ago by dec986260 • updated 2.0 years ago by bernatgel2.9k
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How to do DMR analysis with BiSeq (for RRBS methylation data)?
methylation dmr sequencing written 3.2 years ago by ahmad mousavi520 • updated 2.1 years ago by Charles Warden8.0k
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Paired DMR methylation caller
dmr bisulfite written 2.3 years ago by German.M.Demidov1.9k • updated 2.3 years ago by Charles Warden8.0k
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Are there any way to find DMR with the data in TCGA methylation level3?
450k tcga methylation dmr written 2.5 years ago by Makplus T70 • updated 2.4 years ago by Kevin Blighe71k
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Differentially methylated regions Analysis
tcgabiolinks packages dmr written 3.0 years ago by David_emir390 • updated 3.0 years ago by noorpratap.singh310
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TCGABioLinks how to set Sample conditions?
tcgabolinks tcga dmr dge written 3.0 years ago by David_emir390 • updated 3.0 years ago by mathias.heydt90
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Multisample DMR calling
methylation dmr written 4.4 years ago by Aerval280 • updated 3.3 years ago by hongbo91920
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Statistical test for DMR annotation?
methylation dmr statistics written 6.2 years ago by Amit Lavon10 • updated 3.6 years ago by jordi0
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Selecting between p.value, FDR, Bonferroni
package statistical parameters seqlm dmr written 3.8 years ago by niutster100 • updated 3.8 years ago by agata88810
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MeDIP-Seq DMR analysis using MEDIPS
R medip-seq medips dmr methylation written 6.1 years ago by G.S40 • updated 4.2 years ago by Biostar ♦♦ 20
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Mapping Genes in Differentially Methylated Regions
dmr r packages written 4.5 years ago by questionaire0 • updated 4.5 years ago by Carlo Yague5.7k
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Question about MEDIPS
R medips dmr methylation written 5.4 years ago by hxlei61390 • updated 5.2 years ago by Biostar ♦♦ 20
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Methylation analysis with MEDIPS
medip-seq methylation dmr medips R written 6.6 years ago by ilyco60 • updated 6.5 years ago by Devon Ryan98k
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