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<prev • 63 results • page 1 of 3 • next >
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Normalization for combined data from multiple sources: ssNoob + BMIQ/quantile?
450k dna methylation epic normalization R written 2.2 years ago by victor.2wy • 0 • updated 10 days ago by Biostar ♦♦ 20
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DMRcate results: How to interpret the overlapping.promoters
dna methylation dmrcate R champ written 6 weeks ago by sugus • 40
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Newbie questions about Bismark deduplication step and --bedgraph output
bisulfite seq epigenetics bismark dna methylation written 3 months ago by yh362 • 30
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WGCNA on methylation data
dna methylation wgcna normalization written 4 months ago by enora.fremy • 10 • updated 3 months ago by Kevin Blighe ♦ 49k
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Plausibility of performing t-test on methylation beta values.
beta value dna methylation statistical test written 4 months ago by catechize.2.learn • 110 • updated 4 months ago by Kevin Blighe ♦ 49k
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Beta values for hyper- and hypo- methylated probes
dna methylation epic microarray rnbeads illumina written 19 months ago by rasii • 0 • updated 5 months ago by archi • 0
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TCGA DNA methylation data pipeline
dna methylation tcga pipeline written 8 months ago by yuabrahamliu • 40 • updated 8 months ago by Charles Warden ♦ 7.3k
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Analysis of DNA Methylation data from TCGA
dna methylation tcga written 9 months ago by adriankoh002 • 10 • updated 9 months ago by Kevin Blighe ♦ 49k
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Illumina Human Methylation EPIC array annotation
dna methylation epic array annotation written 10 months ago by janhuang.cn • 150 • updated 10 months ago by Charles Warden ♦ 7.3k
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Annotation of Methylation data in GDC Portal
dna methylation tcga illumina 450k gdc written 10 months ago by noorpratap.singh • 280
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How to quantify the DNA methylation level of a gene from WGBS data?
R quantify tool dna methylation written 11 months ago by wangzer • 0 • updated 11 months ago by Devon Ryan ♦ 92k
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Job: Postdoctoral Research Scientist - Computational Epigenetics: University of Oxford
dna methylation epigenetics job written 11 months ago by olin0151 • 0
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Simple integrative DNA methylation and mRNA expression analysis
dna methylation rna-seq data integration written 11 months ago by Will • 0 • updated 11 months ago by Kevin Blighe ♦ 49k
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Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R gdc rna-seq dna methylation written 12 months ago by rjactonspsfcf • 90
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GDC data portal - Tumour and Adjacent normal
dna methylation tcga gdc rna-seq written 13 months ago by rjactonspsfcf • 90 • updated 13 months ago by Kevin Blighe ♦ 49k
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Large numbers of biological replicates for detecting DMCs and DMRs
dna methylation rrbs many replicates written 17 months ago by yongxpeng • 0
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Interpreting probes in Illumina 450k array
dna methylation illumina 450k cpg written 20 months ago by noorpratap.singh • 280
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DNA Methylation Analysis
dna methylation ngs matrix R python written 19 months ago by caspase8mach • 0
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Tutorial: Differentially methylated regions: Easy & Fast Identification and ANnoTation
dna methylation tutorial dmr written 19 months ago by dec986 • 200
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DMR.plot Erreur : Bad Request
R dmrcate dna methylation written 21 months ago by daron.6 • 0
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Job: Postdoc in Computational Biology - Transcription Factors and DNA methylation, University of Oslo, Oslo, Norway
dna methylation transcription factor job cancer written 22 months ago by Anthony Mathelier • 870 • updated 22 months ago by genomax ♦ 72k
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How to get metthylKit(or SMART2) input file ?
dna methylation dmr bismark methylkit written 24 months ago by wangzer • 0
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Working with Differentially Methylated Regions(DMRs)
dna methylation tcga dmrs minfi written 2.1 years ago by noorpratap.singh • 280 • updated 2.1 years ago by Kevin Blighe ♦ 49k
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Filtering in DNA methylation
dna methylation preprocessing filtering written 2.1 years ago by noorpratap.singh • 280 • updated 2.1 years ago by Kevin Blighe ♦ 49k
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Differntial peak analysis for MethylCap-seq
dna methylation differntial peaks ngs R written 2.2 years ago by Ice P • 0
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Converting beta value to M value (when beta=1)
dna methylation combat written 2.3 years ago by janhuang.cn • 150 • updated 2.3 years ago by Devon Ryan ♦ 92k
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Batch correction for TCGA 450K data
450k dna methylation tcga written 3.7 years ago by aditi.qamra • 260 • updated 2.5 years ago by Biostar ♦♦ 20
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DNA methylation profiling
tissue profiling dna methylation 450k chip written 2.5 years ago by milton.andy • 10
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DNA methylation 450k data - minfi - preprocessFunnorm - CNV cases vs non-CNV controls
450k dna methylation minfi cnv preprocessfunnorm written 2.5 years ago by Thomas • 0
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Whole genome DNA methylation Analysis
macs dna methylation written 2.7 years ago by prasoonagar • 10
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