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Repetitive motifs on Illumina 450k derived sequences
450k dna methylation meme motifs illumina written 4.6 years ago by gbayon • 160 • updated 24 days ago by Ventrilocus • 50
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Bismark methylation for non-uniquely mapping BS-seq reads
dna methylation bismark small rnas sequencing written 6 weeks ago by kashiff007 • 130
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109
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DNA methylation call
dna methylation written 8 weeks ago by zsj • 0
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DNA methylation integrated package
dna methylation written 3.7 years ago by forever • 80 • updated 3 months ago by miky.zo • 40
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What should I do when some probes of a gene is detected as hypomethylated and other probes of the same gene is hypermethylated
dna methylation hyper-hypomethyaltion same gene written 7 months ago by nazaninhoseinkhan • 410
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how to analysis after get methylation matrix for 850K array?
450k dna methylation 850k methylationepic written 7 months ago by Shaway • 0
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How to deal with the twice BS-seq data for the same sample?
dna methylation bs-seq written 8 months ago by younglin113 • 50
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How to test differential methylated regions in R
R cpg island dna methylation written 8 months ago by Shaway • 0 • updated 8 months ago by Kevin Blighe ♦ 63k
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Job: PhD candidate position in Computational Biology and Gene Regulation
dna methylation gene regulation job genomics written 9 months ago by Anthony Mathelier • 890
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889
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Normalization for combined data from multiple sources: ssNoob + BMIQ/quantile?
450k dna methylation epic normalization R written 3.0 years ago by victor.2wy • 0 • updated 10 months ago by Biostar ♦♦ 20
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DMRcate results: How to interpret the overlapping.promoters
dna methylation dmrcate R champ written 11 months ago by sugus • 50
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Newbie questions about Bismark deduplication step and --bedgraph output
bisulfite seq epigenetics bismark dna methylation written 12 months ago by yh362 • 30
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556
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WGCNA on methylation data
dna methylation wgcna normalization written 13 months ago by enora.fremy • 10 • updated 13 months ago by Kevin Blighe ♦ 63k
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Plausibility of performing t-test on methylation beta values.
beta value dna methylation statistical test written 14 months ago by catechize.2.learn • 120 • updated 14 months ago by Kevin Blighe ♦ 63k
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Beta values for hyper- and hypo- methylated probes
dna methylation epic microarray rnbeads illumina written 2.4 years ago by rasii • 0 • updated 15 months ago by archi • 0
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TCGA DNA methylation data pipeline
dna methylation tcga pipeline written 18 months ago by yuabrahamliu • 40 • updated 18 months ago by Charles Warden ♦ 7.8k
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Analysis of DNA Methylation data from TCGA
dna methylation tcga written 19 months ago by adriankoh002 • 10 • updated 19 months ago by Kevin Blighe ♦ 63k
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Illumina Human Methylation EPIC array annotation
dna methylation epic array annotation written 19 months ago by janhuang.cn • 150 • updated 19 months ago by Charles Warden ♦ 7.8k
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Annotation of Methylation data in GDC Portal
dna methylation tcga illumina 450k gdc written 20 months ago by noorpratap.singh • 290
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How to quantify the DNA methylation level of a gene from WGBS data?
R quantify tool dna methylation written 21 months ago by wangzer • 0 • updated 21 months ago by Devon Ryan ♦ 96k
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Job: Postdoctoral Research Scientist - Computational Epigenetics: University of Oxford
dna methylation epigenetics job written 21 months ago by olin0151 • 0
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Simple integrative DNA methylation and mRNA expression analysis
dna methylation rna-seq data integration written 21 months ago by Will • 0 • updated 21 months ago by Kevin Blighe ♦ 63k
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Using GenomicDataCommons R package to identify cases with both DNA methylation and gene expression data
R gdc rna-seq dna methylation written 21 months ago by rjactonspsfcf • 120
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GDC data portal - Tumour and Adjacent normal
dna methylation tcga gdc rna-seq written 23 months ago by rjactonspsfcf • 120 • updated 23 months ago by Kevin Blighe ♦ 63k
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Large numbers of biological replicates for detecting DMCs and DMRs
dna methylation rrbs many replicates written 2.3 years ago by yongxpeng • 0
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Interpreting probes in Illumina 450k array
dna methylation illumina 450k cpg written 2.5 years ago by noorpratap.singh • 290
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DNA Methylation Analysis
dna methylation ngs matrix R python written 2.4 years ago by caspase8mach • 10
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Tutorial: Differentially methylated regions: Easy & Fast Identification and ANnoTation
dna methylation tutorial dmr written 2.4 years ago by dec986 • 230
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DMR.plot Erreur : Bad Request
R dmrcate dna methylation written 2.6 years ago by daron.6 • 0
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Job: Postdoc in Computational Biology - Transcription Factors and DNA methylation, University of Oslo, Oslo, Norway
dna methylation transcription factor job cancer written 2.7 years ago by Anthony Mathelier • 890 • updated 2.7 years ago by genomax ♦ 87k
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