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News: 4th Berlin Summer School in NGS Data Analysis - June 15-19, 2020
ngs dna-seq news rna-seq written 2 days ago by David Langenberger ♦ 9.2k
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Want to edit bioperl script for making .ptt files (for each contig) from .gbk files.
genome software error dna-seq perl python written 7 weeks ago by farhana.m.riaz • 0 • updated 6 weeks ago by genomax ♦ 78k
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Job: Bioinformatician Positions at the University of Chicago BSD Bioinformatics Core
atac-seq proteomics job rna-seq microbiome dna-seq written 7 weeks ago by lhuang7 • 0 • updated 6 weeks ago by fu_entomology • 20
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Converting gff hints to genbank format for augustus training
augustus genome annotation dna-seq written 7 months ago by praasu • 30 • updated 7 weeks ago by marcos.a.godoy.f • 0
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Normalizing gene counts in a quantitative metagenomic DNAseq analysis
illumina dna-seq count depth written 12 weeks ago by allerdrengen55 • 20
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Why does BWA sometimes omit X0 and X1 tags?
burrows-wheeler aligner alignment dna-seq bwa written 3 months ago by b10hazard • 30 • updated 3 months ago by h.mon ♦ 29k
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Annotating dbnsfp by SnpSift on a cluster
snpsift annotation next-gen dna-seq dbnsfp written 4 months ago by kanika.151 • 80
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Which aligners are commonly used for DNA-seq data alignment?
dna-seq alignment sequencing written 3 months ago by manojkumar_bhosale • 70
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kraken2 different bacteria read counts on custom database
kraken2 metagenomics dna-seq written 9 months ago by bangbangphil2 • 0 • updated 4 months ago by ilyzdd • 10
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News: FINAL CALL - 'Introduction to NGS Data Analysis' course in Munich, October 23 - 25
news dna-seq ngs rna-seq workshop written 5 months ago by David Langenberger ♦ 9.2k
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Consensus reads from UMIs
umi dna-seq deduplication written 6 months ago by graeme.thorn • 50 • updated 6 months ago by finswimmer ♦ 13k
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From per bp coverage to average coverage in 10bp intervals
genome dna-seq bam written 6 months ago by Adrian Pelin • 2.3k • updated 6 months ago by Alex Reynolds ♦ 29k
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BWA mapping parameters for DNA capture sequencing protocol
alignment dna-seq bwa capture written 7 months ago by graeme.thorn • 50
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Are there any tools that can extract somatic variants from matched normal tumor vcf files?
variant calling ngs dna-seq written 7 months ago by Sandeep • 250 • updated 7 months ago by Kevin Blighe ♦ 55k
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Measure of SV genomic diversity in a population
structural variants dna-seq population genetics written 7 months ago by lucas.lochovsky • 0
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5 follow
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Forum: To Cloud or Not to Cloud - Privacy implications of genetic data sharing
forum dna-seq security diagnostics written 7 months ago by David Langenberger ♦ 9.2k • updated 7 months ago by anneykim • 0
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Filtering human reads in metagenomics: should supplementary reads be removed?
flagstat metagenomics dna-seq samtools bwa written 7 months ago by ciemanek • 130
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Long-read alignment with Minimap2
minimap2 long-read dna-seq written 9 months ago by gokberk • 60
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Problem with QiaSeq panel
dna-seq clc qiaseq written 9 months ago by Peter Horbatz • 150 • updated 9 months ago by Momchil.Topalov • 20
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Blog: NGS-based research, empowering medical professionals through user-friendly software
illumina ngs dna-seq blog diagnostics written 12 months ago by David Langenberger ♦ 9.2k
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raw sequencing data
database dna-seq raw data sequencing written 9 months ago by Tasneem Fetian • 0 • updated 9 months ago by ATpoint ♦ 29k
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FastQC results interpretation
sequencing dna-seq shotgun rna-seq fastqc written 10 months ago by Tasneem Fetian • 0 • updated 10 months ago by kristoffer.vittingseerup • 3.0k
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GATK best practice step-by-step command lines for Arabidopsis DNA-Seq data analysis
gatk dna-seq arabidopsis written 10 months ago by wangdp123 • 220 • updated 10 months ago by Pierre Lindenbaum ♦ 126k
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Job: Seeking Bioinformatics Scientist to Drive Cancer/Microbiome R&D for Unique Diagnostics @BayArea
ngs dna-seq liquid biopsy job diagnostics written 10 months ago by kevinphillips • 0
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Calculating neutrality statistics like Tajima D with structural variants
structural variants dna-seq population genetics written 11 months ago by lucas.lochovsky • 0
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6 follow
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Median coverage from BAM file
dna-seq coverage written 2.1 years ago by rmf • 900
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Difference between primary nad capture targets
targets dna-seq capture written 3.3 years ago by John • 120 • updated 12 months ago by Roman Luštrik • 80
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News: 3rd Berlin Summer School in NGS Data Analysis (2 seats just became available)
ngs dna-seq news rna-seq written 13 months ago by David Langenberger ♦ 9.2k
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When to remove duplicates using deduplication in Exome-Seq
trueseq dna-seq exome-seq truseq gatk written 13 months ago by oriolebaltimore • 130 • updated 13 months ago by Charles Warden ♦ 7.6k
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6 follow
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Page: *Market Research Survey* Please share your experience with omics data analysis and win an Amazon gift card
genome page dna-seq data analysis rna-seq written 13 months ago by polina99 • 0
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