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Recent Replies
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C: problem in generating correlation heatmap with significance level by
dpc • 150
Thanks Kevin for your suggestion and help. I will definitely take a look on it and let you know. ...
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C: Gene Ontology Bubble Plot using ggplot2 by
guliasitu40 • 50
Thanks for your response. I am using the same code that you have mentioned: ggplot(mydat, aes(y ...
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C: How to get results from random intercepts using the limma package? by
Kevin Blighe ♦ 66k
Hi, you should have mentioned that you have also posted on Bioconductor( https://support.biocondu...
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C: How can I count the symbols in a given string / text and, as a result of that co by
projetoic • 0
ok you can check now
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C: GSEA Preranked Query by
jared.andrews07 ♦ 7.3k
Why do you think it makes sense to do GSEA with correlation values?
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C: Estimating Transcript Abundance with RSEM by
wes • 20
This is the link. https://github.com/trinityrnaseq/trinityrnaseq/wiki/Trinity-Transcript-Quanti...
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C: How to get all possible alignments from MAFFT or another global aligner by
Elephantdumbo • 20
Hey Thanks for your response ! I am only interested in pairwise alignment. I will not be alignin...
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C: How to separate lncRNA and mRNA from RNA-Seq data for differential expression? by
Kevin Blighe ♦ 66k
I see, but, to do that, you still need to align these reads. In the GENCODE FASTA header, the bi...
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C: sbacth on multiple fastq files sequentially by
genomax ♦ 90k
`echo` command is just to make sure the command lines look correct. You can add `echo $1` to scri...
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C: Good bowtie2 alignment rate and low mapping on transrate ... by
doinelpierrot • 0
Ok so I have many reads that map different places of my transcriptom. I know I had a lot of dupli...
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C: Where can I find a fasta file with RefSeq Select sequences? by
genomax ♦ 90k
Use `conda` to install. That would be the easiest. I will need to look at MANE. Will try that tom...
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C: How can I count the symbols in a given string / text and, as a result of that co by
Kevin Blighe ♦ 66k
Por favor cara, precisamos um Input e Output esperado; Per exemplo: Input: > header ...
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