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46
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4.8k
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28 follow
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Tool: sra-explorer : find SRA and FastQ download URLs in a couple of clicks
sra fastq tool sequence-read-archive download written 23 months ago by Phil Ewels • 620 • updated 2 days ago by elenichri • 10
0
votes
1
answer
105
views
1
answer
Unable to find this E coli genome
genome e coli bacteria ensembl download written 7 days ago by pomodoro_sinensis • 0 • updated 7 days ago by Mensur Dlakic • 8.2k
0
votes
0
answers
114
views
0
answers
How to download NCBI nulceotide collection database
ncbi download written 4 weeks ago by jomagrax • 30
0
votes
0
answers
103
views
0
answers
Using Aspera to download from GSA (BIG)
download aspera gsa written 7 weeks ago by liorglic • 340
3
votes
2
answers
179
views
2
answers
How to download all Pseudomonas aeruginosa Genomes from NCBI Genomes database?
ncbi database genome assembly download written 3 months ago by Optimist • 130 • updated 3 months ago by vkkodali • 2.4k
0
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0
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160
views
0
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Download multiple protein sequences from IMG IDs
img ids genes download written 4 months ago by Audrey • 20
0
votes
0
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173
views
0
answers
TCGAbiolink does not download all the data requested
tcgabiolinks data tcga rna-seq download written 4 months ago by guillepalou4 • 10
2
votes
1
answer
350
views
1
answer
SRA ftp site change?
sra fastq ftp download written 4 months ago by michael.j.apostolides • 10 • updated 4 months ago by GenoMax ♦ 95k
4
votes
1
answer
497
views
1
answer
Cannot find faToTwoBit download
2bit fasta download written 6 months ago by dec986 • 240 • updated 6 months ago by ATpoint ♦ 44k
1
vote
0
answers
156
views
0
answers
How to download BAM file from VM
vm bam download written 6 months ago by nickhir • 20
0
votes
0
answers
169
views
0
answers
Public Data Set Download
gwas database genomics publicdata download written 7 months ago by karthick.n • 10
4
votes
2
answers
486
views
5 follow
2
answers
How do I download NCBI prokaryote Genbank and RefSeq databases as single flat text file?
ncbi database download flat file prokaryote written 7 months ago by Michael • 0 • updated 7 months ago by Mensur Dlakic • 8.2k
0
votes
0
answers
133
views
0
answers
Bulk downloads from CNGB
cngb data download repository written 7 months ago by sviatoslav.kendall • 770
0
votes
0
answers
303
views
0
answers
Biopython pdblist download
pdb gunzip biopython download written 8 months ago by nvijay1991 • 0 • updated 8 months ago by JC ♦ 12k
0
votes
1
answer
243
views
1
answer
Reference Data Set Download from 1000 genomes
1000genomes 1kg download written 8 months ago by karthick.n • 10
2
votes
1
answer
295
views
1
answer
bulkdownload fastq files from ENA
bulk fastq ena download written 8 months ago by amitpande74 • 10 • updated 8 months ago by GenoMax ♦ 95k
13
votes
2
answers
2.5k
views
7 follow
2
answers
TCGA immunotherapy treated melanoma data
tcga mutation snp download written 2.4 years ago by Pin.Bioinf • 280 • updated 11 months ago by inesdesantiago • 170
246
votes
8
answers
120k
views
211 follow
8
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Tutorial: How to download raw sequence data from GEO/SRA
geo sra fastq tutorial download bam written 6.4 years ago by Obi Griffith ♦ 19k • updated 13 months ago by Chvatil • 50
0
votes
1
answer
547
views
1
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KEGG and metacyc database downloads
metacyc kegg download written 14 months ago by allerdrengen55 • 50 • updated 14 months ago by Mark • 860
2
votes
1
answer
336
views
1
answer
Unable to download the RNA-seq counts file using RnaSeqGeneEdgeRQL and HTTP status was '404 Not Found
.gz download rnaseqgeneedgerql rna-seq http written 14 months ago by mohammedtoufiq91 • 110 • updated 14 months ago by Mark • 860
1
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0
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876
views
0
answers
gdc-client download: ERROR: Max retries exceeded
gdc-client gdc download written 18 months ago by Shicheng Guo • 8.5k
5
votes
1
answer
1.4k
views
1
answer
Problem with downloading GSE file by GEOquery
geoquery gse file timeout download written 18 months ago by Kim • 10
11
votes
1
answer
4.3k
views
6 follow
1
answer
How to download the complete database Nucleotide collection (nr/nt)?
nr/nt collection blast download written 18 months ago by marongiu.luigi • 520 • updated 18 months ago by Fabio Marroni • 2.6k
0
votes
1
answer
818
views
1
answer
Pubchem Patents Bulk Download
pubchem patents download written 2.0 years ago by nmegz4ever • 0 • updated 21 months ago by Jeremy Leipzig ♦ 19k
1
vote
1
answer
810
views
1
answer
centrifuge-download not working with "vertebrate_mammalian"
centrifuge human genome centrifuge index download written 22 months ago by gastonviarengo • 0 • updated 22 months ago by Bastien Hervé ♦ 4.9k
5
votes
1
answer
2.2k
views
1
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What is the fastest way to download all SRA files of a SRA Study?
ncbi sra sequencing rna-seq download written 23 months ago by lokdeep17 • 0 • updated 23 months ago by ATpoint ♦ 44k
0
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0
answers
576
views
0
answers
Downloading BLAST+ executables to remote cluster on Mac
software blast download written 2.0 years ago by MK2000 • 30
1
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0
answers
1.9k
views
0
answers
Downloading GenomeStudio on Mac
methylation module genomestudio download written 2.2 years ago by daniellemo • 0
57
votes
3
answers
29k
views
36 follow
3
answers
Tutorial: Protocol To Downlad TCGA Data From GDC
tutorial tcga methylation gdc download written 4.5 years ago by Shicheng Guo • 8.5k • updated 2.2 years ago by ATpoint ♦ 44k
0
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793
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0
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ANNOVAR download and processing frequently Questions
esp6500siv2 annovar download written 2.2 years ago by Shicheng Guo • 8.5k
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